mRNA_A-nodosum_M_contig98.10.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig98.10.1
Unique NamemRNA_A-nodosum_M_contig98.10.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A6H5JBC4_9PHAE (Casein kinase II subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC4_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 4.810e-126
Identity = 178/232 (76.72%), Postives = 197/232 (84.91%), Query Frame = 3 
Query:   96 SSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEASHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQRVDGAYFGTTFPHLFFMTYGGMIPDPLEQKFVPRVFGFRVHPSAANGAYGRDLGRGQGQQHERNLEERRRLRR---PPPGPSG 782
            S SSS DGEDTWIQWFC LEGHEMFCE+DR YIED FNLYGLRH+VP INDSLD+ILDR +Q+EASHELMEATCALYGLIHARYVLT  GLEAM AKYT QEFGNCPHF+C+ Q VVPLGVRDEPH+ETVKL+CPKCQ+VYVHPSHAAQRVDGAYFGTTFPHLFFMTYG ++PDPL++ FVPRVFGFRVH +A NGA         G  H++ L+ER+RLRR   PPP   G
Sbjct:    2 SDSSSSDGEDTWIQWFCGLEGHEMFCEIDRGYIEDAFNLYGLRHFVPRINDSLDLILDRTAQNEASHELMEATCALYGLIHARYVLTAAGLEAMYAKYTLQEFGNCPHFLCKRQSVVPLGVRDEPHIETVKLYCPKCQNVYVHPSHAAQRVDGAYFGTTFPHLFFMTYGTLVPDPLDKTFVPRVFGFRVHSTAPNGASA------SGDHHDQRLQERKRLRRANLPPPKEPG 227
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: D8LK36_ECTSI (Casein kinase II subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK36_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 1.730e-95
Identity = 131/165 (79.39%), Postives = 145/165 (87.88%), Query Frame = 3 
Query:   96 SSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEASHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQRVDGAYFGTTFPHLFF 590
            S SSS DGEDTWIQWFC LEGHEMFCE+DR YIED FNLYGLRH+VP INDSLD+ILDR +Q+EASHELMEATCALYGLIHARYVLT  GLEAM AKYT QEFGNCPHF+C+GQ VVPLGVRDEPH+ETVKL+CPKCQDVYVHPSHAAQ    + FG+++ H  +
Sbjct:    2 SDSSSSDGEDTWIQWFCGLEGHEMFCEIDRGYIEDAFNLYGLRHFVPRINDSLDLILDRTAQNEASHELMEATCALYGLIHARYVLTAAGLEAMYAKYTLQEFGNCPHFLCKGQSVVPLGVRDEPHIETVKLYCPKCQDVYVHPSHAAQ----SEFGSSWHHQLY 162
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A835ZJS8_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS8_9STRA)

HSP 1 Score: 261 bits (668), Expect = 8.770e-85
Identity = 118/196 (60.20%), Postives = 150/196 (76.53%), Query Frame = 3 
Query:   99 SSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEASHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVH--PSHAAQRVDGAYFGTTFPHLFFMTYGGMIPDPLEQKFVPRVFGFRVHPSAAN 680
            +SS+ DGED+W+QWFC+L+GHEMFCEVDRSYIEDGFNLYGLR +VP+I + LD+ILDRV   ++  +L++++  LYGLIHARY++TT GLEAM  K+  Q+FG CP  +CR   VVP+G+RDEP +E VKLFCP CQDVY    PS    ++DGAYFGTTF HLF MTY    P   E  +VPR+FGFR+H  A++
Sbjct:    4 TSSTGDGEDSWVQWFCSLQGHEMFCEVDRSYIEDGFNLYGLRQYVPNITECLDIILDRVGPEDSDEDLLQSSYMLYGLIHARYIITTNGLEAMRKKHAMQDFGCCPRMLCRASAVVPIGMRDEPKLEGVKLFCPSCQDVYAPWAPSSPQAQLDGAYFGTTFAHLFCMTYEITAPTAKE-LYVPRIFGFRIHREASS 198
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7R9W3V5_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3V5_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.760e-76
Identity = 122/216 (56.48%), Postives = 151/216 (69.91%), Query Frame = 3 
Query:   87 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------------VDGAYFGTTFPHLFFMTYGGMIPDPLEQK--FVPRVFGFRVHPSA 674
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G++DE  ++TVK+FCPKCQ VY HP     R               VDGA FGTTFPHLF MT+  ++PDPL+Q+  +VPRVFGFRVH SA
Sbjct:   73 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLIQCNGQPVLPVGLKDEMGVDTVKIFCPKCQCVY-HPPPIRSRSSHHGPGGSAGGSGSVDGAAFGTTFPHLFLMTFNNLVPDPLDQQSAYVPRVFGFRVHQSA 286
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A448YXJ5_9STRA (Casein kinase II subunit beta n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXJ5_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.160e-76
Identity = 122/211 (57.82%), Postives = 149/211 (70.62%), Query Frame = 3 
Query:   87 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP------SH----AAQRVDGAYFGTTFPHLFFMTYGGMIPDPL--EQKFVPRVFGFRVHPSA 674
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G++DE   +TVK+FCPKCQ VY  P      SH     A  VDGA FGTTFPHLF MT+  ++PDPL  +  +VPRVFGFRVH SA
Sbjct:    1 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGPAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPADSAYVPRVFGFRVHMSA 210
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7S0Y7J2_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7J2_9STRA)

HSP 1 Score: 243 bits (620), Expect = 7.030e-76
Identity = 121/216 (56.02%), Postives = 150/216 (69.44%), Query Frame = 3 
Query:   87 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------VDGAYFGTTFPHLFFMTYGGMIPDPL--EQKFVPRVFGFRVHPSAANGAYG 692
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T+ GL+AM  KY  +EFG CP   C GQPV+P G++DE   +TVK+FCPKCQ V+ HP     R         VDGA FGTTFPHLF MT+  ++PDPL  +  ++PRVFGFRVH SA   A G
Sbjct:   17 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITSHGLDAMYNKYASKEFGTCPLVQCAGQPVLPCGLKDEMGADTVKIFCPKCQCVF-HPPPVRSRHHGGAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPKDSAYIPRVFGFRVHMSARQRASG 230
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7S0GAP8_9STRA (Casein kinase II subunit beta n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAP8_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.770e-75
Identity = 118/205 (57.56%), Postives = 148/205 (72.20%), Query Frame = 3 
Query:   87 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEASH-ELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR-----VDGAYFGTTFPHLFFMTYGGMIPDPL--EQKFVPRVFGFRVHPSA 674
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++   +L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G+RDE   ++VK+FCPKCQ VY HP +  +R     VDGA FGTTFPHLF MT+  ++PD L  +  +VPRVFGFRVH SA
Sbjct:    1 MAYNEESSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRASVSNFSDCLDLILDRIGPDDSDESKLTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLTQCTGQPVLPVGLRDEIGQDSVKIFCPKCQCVY-HPPYGGRRGGSGTVDGASFGTTFPHLFLMTFSNLVPDGLAADATYVPRVFGFRVHHSA 204
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7S1ZP41_TRICV (Casein kinase II subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP41_TRICV)

HSP 1 Score: 243 bits (621), Expect = 2.040e-75
Identity = 121/216 (56.02%), Postives = 149/216 (68.98%), Query Frame = 3 
Query:   87 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------------VDGAYFGTTFPHLFFMTYGGMIPDPLE--QKFVPRVFGFRVHPSA 674
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G++DE  ++TVK+FCPKCQ VY HP     R               VDGA FGTTFPHLF MT+  ++PDPL+    +VPRVFGFRVH SA
Sbjct:    1 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLIQCNGQPVLPVGLKDEMGVDTVKIFCPKCQCVY-HPPPIRSRSSHHGPGGSAAGSGAVDGAAFGTTFPHLFLMTFNNLVPDPLDPASAYVPRVFGFRVHQSA 214
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A1E7FEH7_9STRA (Casein kinase II subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEH7_9STRA)

HSP 1 Score: 242 bits (618), Expect = 2.410e-75
Identity = 121/210 (57.62%), Postives = 148/210 (70.48%), Query Frame = 3 
Query:   87 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP------SH----AAQRVDGAYFGTTFPHLFFMTYGGMIPDPLEQK--FVPRVFGFRVHPS 671
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G++DE   +TVK+FCPKCQ VY  P      SH     A  VDGA FGTTFPHLF MT+  ++PDPL Q   ++PRVFGFRVH S
Sbjct:    1 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGGAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPQDSAYIPRVFGFRVHIS 209
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BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7S3PD94_9STRA (Casein kinase II subunit beta n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD94_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.020e-74
Identity = 117/206 (56.80%), Postives = 148/206 (71.84%), Query Frame = 3 
Query:   87 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP-----SHAAQRVDGAYFGTTFPHLFFMTYGGMIPDPL--EQKFVPRVFGFRVHPSA 674
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  ++FG CP   C GQPV+P+G++DE  ++TVK+FCPKC  VY  P     ++ +  VDGA FGTTFPHLF MT+  ++PDPL  E  +VPRVFGFRVH  A
Sbjct:   59 MAFNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKDFGTCPLVQCSGQPVLPVGLKDEMGVDTVKIFCPKCTQVYHTPPLRSRANVSTGVDGAAFGTTFPHLFLMTFSNLVPDPLPVESSYVPRVFGFRVHQLA 263
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBC4_9PHAE4.810e-12676.72Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
D8LK36_ECTSI1.730e-9579.39Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
A0A835ZJS8_9STRA8.770e-8560.20Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A7R9W3V5_9STRA1.760e-7656.48Casein kinase II subunit beta (Fragment) n=1 Tax=P... [more]
A0A448YXJ5_9STRA2.160e-7657.82Casein kinase II subunit beta n=1 Tax=Pseudo-nitzs... [more]
A0A7S0Y7J2_9STRA7.030e-7656.02Casein kinase II subunit beta (Fragment) n=1 Tax=P... [more]
A0A7S0GAP8_9STRA1.770e-7557.56Casein kinase II subunit beta n=1 Tax=Proboscia in... [more]
A0A7S1ZP41_TRICV2.040e-7556.02Casein kinase II subunit beta n=1 Tax=Trieres chin... [more]
A0A1E7FEH7_9STRA2.410e-7557.62Casein kinase II subunit beta n=1 Tax=Fragilariops... [more]
A0A7S3PD94_9STRA1.020e-7456.80Casein kinase II subunit beta n=1 Tax=Amphora coff... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:145992..152985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LK36
PFAMsCK_II_beta
Model size825
Max annot lvl2759|Eukaryota
KEGG koko:K03115
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.16e-96
EggNOG OGsCOG5041@1|root,KOG3092@2759|Eukaryota
Ec32 ortholog descriptionCasein kinase II, regulatory subunit, beta-sheet
Ec32 orthologEc-06_008020.1
Descriptionprotein kinase regulator activity
Cds size738
COG categoryDKT
BRITEko00000,ko00001,ko03009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870507.6289048-UTR-A-nodosum_M_contig98:145991..1460771680870507.6289048-UTR-A-nodosum_M_contig98:145991..146077Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig98 145992..146077 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870507.6417465-CDS-A-nodosum_M_contig98:146077..1462671680870507.6417465-CDS-A-nodosum_M_contig98:146077..146267Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 146078..146267 +
1680870507.6536343-CDS-A-nodosum_M_contig98:150934..1510561680870507.6536343-CDS-A-nodosum_M_contig98:150934..151056Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 150935..151056 +
1680870507.6688228-CDS-A-nodosum_M_contig98:151845..1519901680870507.6688228-CDS-A-nodosum_M_contig98:151845..151990Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 151846..151990 +
1680870507.682852-CDS-A-nodosum_M_contig98:152704..1529851680870507.682852-CDS-A-nodosum_M_contig98:152704..152985Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 152705..152985 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.10.1prot_A-nodosum_M_contig98.10.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig98 146078..152985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig98.10.1

>prot_A-nodosum_M_contig98.10.1 ID=prot_A-nodosum_M_contig98.10.1|Name=mRNA_A-nodosum_M_contig98.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=246bp
MSGSSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVP
SINDSLDVILDRVSQHEASHELMEATCALYGLIHARYVLTTGGLEAMCAK
YTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHA
AQRVDGAYFGTTFPHLFFMTYGGMIPDPLEQKFVPRVFGFRVHPSAANGA
YGRDLGRGQGQQHERNLEERRRLRRPPPGPSGTPDMTAVASSTVAA
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mRNA from alignment at A-nodosum_M_contig98:145992..152985+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig98.10.1 ID=mRNA_A-nodosum_M_contig98.10.1|Name=mRNA_A-nodosum_M_contig98.10.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6994bp|location=Sequence derived from alignment at A-nodosum_M_contig98:145992..152985+ (Ascophyllum nodosum dioecious)
CCTTGGGAATTAGAAGCTCGTCGAGAGTCGACGGGGCTGGACGCTAAATT
CAGTAGTAAAGCGATTGTCAGAAAGGACGAGGGAGAATGTCGGGGTCTTC
TTCAAGCTCGGACGATGGGGAGGACACTTGGATCCAGTGGTTTTGCGCGC
TGGAGGGGCACGAAATGTTCTGCGAGGTGGATCGCAGCTATATAGAGGAT
GGTTTTAACCTCTACGGGCTTAGGCACTGGGTTCCAAGCATCAACGACAG
CTTGGATGTTATCCTAGATCGAGTATGTGAGTTTGTCGCACCCAGCCTGA
GGCATTTGTCTATCTTCGGAGAGAGGGGATTGGCTTCAGCTATATTAAGT
CGGTAGGATTTTTCAGCCTTTCCCTGAAGAGGCCAACCGAGACGATAATT
ATATGCATGTCCCAATCCAACCTTACACCATGACATCAAGACAGCAACAG
GACCACAAGGGAAAGCACCCCGTGCTCTCTTGGGGGCTACGTCTCGTATG
CCCCAGAAATGAGAGGGTCGGGAAGGAAATGTCATCTTACCAGACGAAAT
TGCCCGTCGCGTTCTGCAAATATCTGTGGGTCTTTCGCTTCCCTAAGTCC
ACGCATTCAAATCTGGTTACAAGTACTTGGCTGACTTGAAAGGTCCTTGG
GCAATTGGCCCATTTCTTATTTTTCGCCTTCTCTGGCTCTCAAGGACTAC
AGAGAATACAGTGGTGCTGTCTGTGATGCCATGTGACAAATTGGCAGGAT
TGTTTTTCGCCAAGCCATCGCGGTCCTCTATGCATCTACGTGAGCATAGA
TACTATGCCTACCCGGTTGTAGTCATTCCATTCTGTATTTACACGATTTT
CTGATCGATCGTACCTGAGACTTACTACTGTTTACAACGCCCCGGGATGC
TGTGCTCCCTCTGTCTACACCATTATTTATTACCAGGTATACAGTAGAGT
ACAACTCCTACTCTAGAGCTAGACTGTACCTGGCAGTAGTTATGTACCTC
ACCACCTTATTATCCTATGAATATAGGTTGTACAGACAGCACCTGTACTT
CTATATACAAATCAAGATGTCGCGCGAAATTATTGAAATGATTCTTGTAC
GAGTACTAGTGTACTACTATACTCTGTACCAGGTATGAAATGGTTTTGAC
ACGTGCAGTGCGAATCTCTTTCGAAGGACATACAAAAAACCACTTGTACG
TACGTTTGTAATGTTTCGATTTTAACGCTAGGCTGCCGCGTGTACTCGTA
CAAACAATAAATGTTATCTGGAGAACCTGTTTAAATGCCATGAAGAGGTT
TTGTATTTGCAGCCTTTGATCCCACCTAATCGTTTTGACATTTTTTCCCC
CAGAACCGGGGGATGCTCAGAAGGTCTAGGTGTGCTCTGATTTTTCTTTT
AAAAAAATACCTCGTAGACGCGGCGATGTGGGGTTGGACCGTTCCACTTT
CATGGATGGTTTTTATGATCAAGATGTTCCATTTACATCCGTCAGTGTCA
GTGTTAAGTCTACCCATGTACCAGACACTACTGTTGTACAGTACAAACTG
TAGGACGGACACACACATGCGCACGAACAAGTACAAGTATTAATTGTTGT
ACAATCCATGAGCAGACGAACTCTACATCGGTATCTACTCTACAAATAGT
GTGCTGTGCTGTACTTGGTGCGATGTACTCTTGTGCTGTCCATTTCCTAC
GCAAGTGGTAAACATTAAAGCGGCTAATCGCACCGTAACTTGACGTGCAT
TTGGTGATGACCTTTCATGCTGTCTCAAAGCCTGAGACGAGGTCTGCCTC
TAGGCACCATTATGTTCCTTGCGTATGATGGAGCGTTGCAGCTGTCAGCC
GCAGCAGCAGCCCAATCTGGCGTTATCACACGACACCAGTCCATTGTACG
TGTGTGTGTGTGTGTTTTCTTCCCATCCATTCTGGACATCAAGTTCGTTG
GACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACACAGGATTTTTAAC
CCACCTTCCTTCTGCGGTGCGTGCCTTGATTTTTGTCGCGAGAAGGATTC
AGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATTTTGTGTACTAACG
AATTAATCGTTCTCCACCCGTTGGGCATTTTTATTTTGTTTTTTTTagTT
TTTAAGTGAGAAAAATCCCGTTTGCCggGATCGAACtCAcGTCCCAAcgt
GTCAGAAGGTTACGAGGTGCCGACTGAGCTACCGGGGTCGACCGGCTTCG
TGTAGTGCTTCTGTTTCGGGGTCGACAGCCTCAGATACTTTGTGTATGAC
ACACTAACATCAACATGTTCACTAAATACCAATAGTGGGCGTGCGAAAAG
AGAGGCGCACATTGATTGGCCCGTGGTGAGACCTGAAAACGCAGCACCCG
TTACCGGAACTTTCTTGGGGACTTCTGGCCCTGTGCCGGCGGACTCTCGG
CAGTGAACGCCATCTCGCGAGATCAAATGATCAGGCGCGAACGAGGGTAG
GTCAATATTAATTTCCCCTGTCCAGCTGACCACGAGAAGGATCGACAACC
TCACCAAGTTGATCCATACTCTACTATACTTTCAACATGCCCACTTCATA
CCATTAGTGGTTGTGGCAAAGAGAGGCGCATATTAATTGGTCCATGGTGA
CCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGAGATTTACTGGCCCTA
TGCCGGCGAACTCTCGGCAGTATGTATATATGTATGTATGGTCATCACAT
ATAGCAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTC
AGCTGAACAGGGAAAATAATATTCCCCTGTCCCCGTGCGTGCCTGAGAAT
TTGGTCTCGCGAGATGGGTTCAGCCGTCCCGTCCCGCGTCAGCCTGCTCA
TCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAG
TTCCGCGGCGGCGTCCATTTATGAAACCGCCATACGACATCGGGTCAGTC
CCGAGTTTATGGGGTCACGCAATTGCGTACTGATGGCGTTCACTGCCGAG
AGTCCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGGGTGC
TGCCTTGGCAGATCACCATGGACCAATTAATATTCGCCTCTCTTTCCCAC
ACCCACTAATGGTATGAAGTGGGCATGTTGAAAGTACCGGCGGCAGTGAA
CGCCATCGGTACGCAATTGCGTGACCCGATAAACTCGGGACTGGCCCGAT
GGCATATGGCGGTTCCATAAATGGACGCCGCCGCGGAACTCGGGAGGAAT
CCCGCAAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGA
CGCGGGACGGGACTGCTGGACTCGTCTCGCGAAACCAAATTCTCAGGCAC
GCACGGGGACAGGGGAATATTATTTTCCCTGTTCAGCTGACCACGAGCAG
GATTGGCAACCTGACCCGGTTGATCCATACTCTGCTGGTACTTTCAACAT
GCCCACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCGAATATTAATT
GGTCGATGGTGACCTGTCAAGGCAGCACCCGTTCGGAACTACCTTGAGGT
TTACTGGCCCTGCGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGC
CATTACGTGACCCGATAAACTCGGGGCTGACCCGATGGCGTTATGGGGGT
TTTAAATGAATAAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAA
GTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCAGGA
CGGGACGGCTGAACCCGTCTCGCGAGACCAAATCCTCAGGCACAGGCACC
CACGGGGACAGGGGGATATTCATTTTCCCTGTTCAGCTGACCACAAGCAG
GATTGGTTACCCGGTTGATGCATACTCTGCTATATGTGATGACCATACAT
AAGTCATAACCATGCGTATGTAGCGGACACCCCAAACCCCACCCAGACAG
CTAGATACAGTACTGTACTGTAATCACGATCATGAAATTTTTATCACCAC
TCGTTTGTGCTGATATACACTATTAATAACTACATCCACGGTTCCGAGGC
ATCGCCGTACATGGCCTTGTTCTTCTACGCAGGGCAACACGAGCATTTGC
TACAGTACCAGTAAAGAAAGACTACTGCTGGAGTTTGCAGTAAAAAGCTA
CAGCAGAGTAGACTACACTATATCCTGGTTGTTTTCCCCTCGTGTTCGAG
TACTAATAAACAATAAACCTACAGTTGCAGGATACTGGTAGTACCAGTAC
ACAGAGTCTTTCTAAATTATTTTTGAAATTACTTTCAACGCCATGACTGT
TGATACGATGCATAGCTCTAATAATATTACGCACTCGTAGCTCCATGCTA
ATACTGTAATATTTTGTGGTTCACTTGGAACGGAAAATAAACTGTCTTGT
ATACGCCCGGCAGTTACATTGTGTGTGTGTGTGTGTGTGCGTTGCATCCC
ATTCATTCTGGACGTCAGCGTGGACGTACCAGCTGGGGTCACACAGGATT
TCTCCACCTTTTTTCTGCGGTGCTTGCCTTAATTTTTCTTGCGAAAAGGA
TTCCGCCGTTCCTTTCCCTCGTCGACCGTGAAGTCGAATGTTGTGTACGA
ACGATTTAATCGTTTTCCACTTGTTGGGCATTATGTGAGAGAAAATCCCA
GATCGTGTGACTGCGCCGAGATTCGAACTCACGTCCCAACGTCAGAAGGT
TTCGAAGTTGCCAGCTGAACCACCGGGGCGACCGACACCCTTGATCCACG
GTGCTCTTTCTCCGCCGATTGTCCCATGTCTCGATTCATTTTCCTTTTGA
TTTATTTTCAACTGTCGCAGAACCTCGGCCTTAACCTAAAACTGACCCTT
GATCTTACTATTGATAACCTCAACCCTCAACCCTCAACCGCAGCTCAACA
CGAAGCGAGCCACGAGCTGATGGAGGCGACATGCGCGCTGTACGGTCTAA
TCCATGCCCGTTACGTGCTGACGACCGGTGGACTGGAGGCCATGTGCGCC
AAGTACACCCGTCAGGTGAGAAAAATTGACCAAATTGACCGCGGTCTGAC
AGATCACAGATCAGATCGATCGAACCCAGTCTCGATCCACGCAATCGACG
CTCAATTAGAGCTTGAAGGACGAGATGTTGTATTTTAAAATCAACGAGGG
TGCTTCTAGATCTAATATTATATTATTTTTACTTAATAGTAGTAGGATAA
ATAGCTCATTACTGTATTAGAGCAAAGATTCCCGCTCGCAGCGGTAAGTT
CTCAGGCTGCTCCCAGCGGTAAATCTCTGGCTGCCTAATAGCCTATAGTA
TAGCACAACCTCTGAAGCCATCCTTTGATGCAAGCACCCACCTCTTTGAA
GGCCCTCACGCATCACGTCACAGATGTAGGACCACCGAACCCGGATTTCT
ATCCGTGGCACTTTCGTCTGCCATCCTAAAGCCAGGATTCGTCAAGACCA
CCACTTTCTAGTGGAATAATGACCCCTGCCTTCTCAGGAGTTGCATACGT
AGATAGAACCAATGGCGTGTTTCCGAGGGCGCGTCTGTCTTGCGCCGTGT
AGATGATGGTACTATTAATACCGGTATTTGATACCATACCGTACGAATAC
GACTCTATCAGTAGGTCATCGCGGTTGTCAAGTTTCGTGTCCACTGTACT
ATTCTAGTCTACTATGATGACCATTAATAGAACTGTAGTACTACAGTAGA
ACCACTGCACTGTTCGACGAGCATTTGTCACGCATCCGTTAGGCCGTGAA
TGTACCGTAATAGAGCTACTGCCTTACCGCATACCGATCGCTGCATCAAC
TCAGGAGTTTGGCAACTGTCCGCACTTCATGTGCCGGGGACAGCCTGTGG
TTCCTCTGGGCGTGCGAGACGAGCCGCACATGGAGACCGTCAAGCTCTTC
TGTCCCAAGTGCCAGGACGTGTACGTGCACCCTTCGCACGCGGCGCAAAG
TGAGTTTGTCGTGTCAGACGGCGTGTCCTATAAAGGGGTTCCAGCTCCAG
CAACTGAATTAGCGCTATTGTTGGACTGAAGACGAGGTCGAGTTTCCAAC
AGCGTGGTTGTTGATGGTGCTGGTGCTCGTATAGAGTGTGTTGTGTATTC
GTTGTATACCGATGTCGTTGTGTATGGTGTAGTGTAGTTTAGTGTATTGT
GTAGTGTATTGGGTATAGTGTAGTGTATTGTATCGTCACAGCACAGACAA
TATTAATAGTAGCACGCACTAAGCCGTCCCAAGAATCTCGCCAATGGTAA
GGTAATGGTAAGCCTTCGAGAGATGGCCGTGGGACAGCGGTAGATGTGAC
AACAAGCAGCATGTCCGGAATCGCCGTGAAACGCGGAGTCGCCGCCCCGT
CAGCGAATGCCGGAAATATAATACGAAGCTACTTGTTCAATCGTCTACTC
TAGAGTGCATTCGTACCTAACGTTTGGCGCGCTTGCGAATAACAGTACGT
TCAGAACTCGACCCCCCCCCCCACCCGTCGAGTTGCTTTGTGTTTCACCT
GCCAGGGGGGACAAAATACAAAATAGTCAAGTTAAAGACGAAAGTGTACA
GTTTTCCACAAGGTTGTCGAGCGTGTTCCACCCCGCCCTTTTAAACAATC
CTACAATTGTCAATTGTCGCCCTCCTCTTGTTTCTTGGCGTACTCTGATA
TCGCCGTGCCCAGGGGTCGACGGCGCCTACTTTGGGACAACGTTCCCACA
CCTCTTCTTCATGACCTACGGAGGCATGATACCCGACCCGCTAGAGCAGA
AGTTCGTGCCGCGCGTGTTCGGCTTCCGTGTCCATCCTTCCGCCGCGAAC
GGGGCCTACGGCAGAGATTTAGGCAGAGGTCAGGGCCAGCAGCACGAGCG
GAACCTCGAAGAGCGGAGACGACTCAGGCGGCCGCCACCGGGGCCGTCGG
GGACACCGGATATGACAGCAGTTGCATCATCAACAGTAGCAGCT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig98:145992..152985+

>mRNA_A-nodosum_M_contig98.10.1 ID=mRNA_A-nodosum_M_contig98.10.1|Name=mRNA_A-nodosum_M_contig98.10.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at A-nodosum_M_contig98:145992..152985+ (Ascophyllum nodosum dioecious)
ATGTCGGGGTCTTCTTCAAGCTCGGACGATGGGGAGGACACTTGGATCCA
GTGGTTTTGCGCGCTGGAGGGGCACGAAATGTTCTGCGAGGTGGATCGCA
GCTATATAGAGGATGGTTTTAACCTCTACGGGCTTAGGCACTGGGTTCCA
AGCATCAACGACAGCTTGGATGTTATCCTAGATCGAGTATCTCAACACGA
AGCGAGCCACGAGCTGATGGAGGCGACATGCGCGCTGTACGGTCTAATCC
ATGCCCGTTACGTGCTGACGACCGGTGGACTGGAGGCCATGTGCGCCAAG
TACACCCGTCAGGAGTTTGGCAACTGTCCGCACTTCATGTGCCGGGGACA
GCCTGTGGTTCCTCTGGGCGTGCGAGACGAGCCGCACATGGAGACCGTCA
AGCTCTTCTGTCCCAAGTGCCAGGACGTGTACGTGCACCCTTCGCACGCG
GCGCAAAGGGTCGACGGCGCCTACTTTGGGACAACGTTCCCACACCTCTT
CTTCATGACCTACGGAGGCATGATACCCGACCCGCTAGAGCAGAAGTTCG
TGCCGCGCGTGTTCGGCTTCCGTGTCCATCCTTCCGCCGCGAACGGGGCC
TACGGCAGAGATTTAGGCAGAGGTCAGGGCCAGCAGCACGAGCGGAACCT
CGAAGAGCGGAGACGACTCAGGCGGCCGCCACCGGGGCCGTCGGGGACAC
CGGATATGACAGCAGTTGCATCATCAACAGTAGCAGCT
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