prot_A-nodosum_M_contig98.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig98.10.1
Unique Nameprot_A-nodosum_M_contig98.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length246
Homology
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A6H5JBC4_9PHAE (Casein kinase II subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC4_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 1.290e-125
Identity = 178/232 (76.72%), Postives = 197/232 (84.91%), Query Frame = 0
Query:    4 SSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEASHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQRVDGAYFGTTFPHLFFMTYGGMIPDPLEQKFVPRVFGFRVHPSAANGAYGRDLGRGQGQQHERNLEERRRLRR---PPPGPSG 232
            S SSS DGEDTWIQWFC LEGHEMFCE+DR YIED FNLYGLRH+VP INDSLD+ILDR +Q+EASHELMEATCALYGLIHARYVLT  GLEAM AKYT QEFGNCPHF+C+ Q VVPLGVRDEPH+ETVKL+CPKCQ+VYVHPSHAAQRVDGAYFGTTFPHLFFMTYG ++PDPL++ FVPRVFGFRVH +A NGA         G  H++ L+ER+RLRR   PPP   G
Sbjct:    2 SDSSSSDGEDTWIQWFCGLEGHEMFCEIDRGYIEDAFNLYGLRHFVPRINDSLDLILDRTAQNEASHELMEATCALYGLIHARYVLTAAGLEAMYAKYTLQEFGNCPHFLCKRQSVVPLGVRDEPHIETVKLYCPKCQNVYVHPSHAAQRVDGAYFGTTFPHLFFMTYGTLVPDPLDKTFVPRVFGFRVHSTAPNGASA------SGDHHDQRLQERKRLRRANLPPPKEPG 227          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: D8LK36_ECTSI (Casein kinase II subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK36_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 4.980e-95
Identity = 131/165 (79.39%), Postives = 145/165 (87.88%), Query Frame = 0
Query:    4 SSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEASHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQRVDGAYFGTTFPHLFF 168
            S SSS DGEDTWIQWFC LEGHEMFCE+DR YIED FNLYGLRH+VP INDSLD+ILDR +Q+EASHELMEATCALYGLIHARYVLT  GLEAM AKYT QEFGNCPHF+C+GQ VVPLGVRDEPH+ETVKL+CPKCQDVYVHPSHAAQ    + FG+++ H  +
Sbjct:    2 SDSSSSDGEDTWIQWFCGLEGHEMFCEIDRGYIEDAFNLYGLRHFVPRINDSLDLILDRTAQNEASHELMEATCALYGLIHARYVLTAAGLEAMYAKYTLQEFGNCPHFLCKGQSVVPLGVRDEPHIETVKLYCPKCQDVYVHPSHAAQ----SEFGSSWHHQLY 162          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A835ZJS8_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS8_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.810e-84
Identity = 118/195 (60.51%), Postives = 149/195 (76.41%), Query Frame = 0
Query:    6 SSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEASHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVH--PSHAAQRVDGAYFGTTFPHLFFMTYGGMIPDPLEQKFVPRVFGFRVHPSAAN 198
            SS+ DGED+W+QWFC+L+GHEMFCEVDRSYIEDGFNLYGLR +VP+I + LD+ILDRV   ++  +L++++  LYGLIHARY++TT GLEAM  K+  Q+FG CP  +CR   VVP+G+RDEP +E VKLFCP CQDVY    PS    ++DGAYFGTTF HLF MTY    P   E  +VPR+FGFR+H  A++
Sbjct:    5 SSTGDGEDSWVQWFCSLQGHEMFCEVDRSYIEDGFNLYGLRQYVPNITECLDIILDRVGPEDSDEDLLQSSYMLYGLIHARYIITTNGLEAMRKKHAMQDFGCCPRMLCRASAVVPIGMRDEPKLEGVKLFCPSCQDVYAPWAPSSPQAQLDGAYFGTTFAHLFCMTYEITAPTAKE-LYVPRIFGFRIHREASS 198          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7R9W3V5_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3V5_9STRA)

HSP 1 Score: 244 bits (624), Expect = 2.560e-76
Identity = 119/210 (56.67%), Postives = 149/210 (70.95%), Query Frame = 0
Query:    6 SSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------------VDGAYFGTTFPHLFFMTYGGMIPDPLEQK--FVPRVFGFRVHPSA 196
            SS+   ++ WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G++DE  ++TVK+FCPKCQ VY HP     R               VDGA FGTTFPHLF MT+  ++PDPL+Q+  +VPRVFGFRVH SA
Sbjct:   79 SSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLIQCNGQPVLPVGLKDEMGVDTVKIFCPKCQCVY-HPPPIRSRSSHHGPGGSAGGSGSVDGAAFGTTFPHLFLMTFNNLVPDPLDQQSAYVPRVFGFRVHQSA 286          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A448YXJ5_9STRA (Casein kinase II subunit beta n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXJ5_9STRA)

HSP 1 Score: 242 bits (618), Expect = 3.160e-76
Identity = 119/205 (58.05%), Postives = 147/205 (71.71%), Query Frame = 0
Query:    6 SSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP------SH----AAQRVDGAYFGTTFPHLFFMTYGGMIPDPL--EQKFVPRVFGFRVHPSA 196
            SS+   ++ WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G++DE   +TVK+FCPKCQ VY  P      SH     A  VDGA FGTTFPHLF MT+  ++PDPL  +  +VPRVFGFRVH SA
Sbjct:    7 SSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGPAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPADSAYVPRVFGFRVHMSA 210          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7S0Y7J2_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7J2_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.030e-75
Identity = 118/210 (56.19%), Postives = 148/210 (70.48%), Query Frame = 0
Query:    6 SSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------VDGAYFGTTFPHLFFMTYGGMIPDPL--EQKFVPRVFGFRVHPSAANGAYG 202
            SS+   ++ WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T+ GL+AM  KY  +EFG CP   C GQPV+P G++DE   +TVK+FCPKCQ V+ HP     R         VDGA FGTTFPHLF MT+  ++PDPL  +  ++PRVFGFRVH SA   A G
Sbjct:   23 SSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITSHGLDAMYNKYASKEFGTCPLVQCAGQPVLPCGLKDEMGADTVKIFCPKCQCVF-HPPPVRSRHHGGAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPKDSAYIPRVFGFRVHMSARQRASG 230          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7S0GAP8_9STRA (Casein kinase II subunit beta n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAP8_9STRA)

HSP 1 Score: 242 bits (618), Expect = 2.570e-75
Identity = 115/199 (57.79%), Postives = 146/199 (73.37%), Query Frame = 0
Query:    6 SSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEASH-ELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR-----VDGAYFGTTFPHLFFMTYGGMIPDPL--EQKFVPRVFGFRVHPSA 196
            SS+   ++ WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++   +L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G+RDE   ++VK+FCPKCQ VY HP +  +R     VDGA FGTTFPHLF MT+  ++PD L  +  +VPRVFGFRVH SA
Sbjct:    7 SSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRASVSNFSDCLDLILDRIGPDDSDESKLTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLTQCTGQPVLPVGLRDEIGQDSVKIFCPKCQCVY-HPPYGGRRGGSGTVDGASFGTTFPHLFLMTFSNLVPDGLAADATYVPRVFGFRVHHSA 204          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7S1ZP41_TRICV (Casein kinase II subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP41_TRICV)

HSP 1 Score: 242 bits (617), Expect = 2.980e-75
Identity = 118/210 (56.19%), Postives = 147/210 (70.00%), Query Frame = 0
Query:    6 SSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------------VDGAYFGTTFPHLFFMTYGGMIPDPLE--QKFVPRVFGFRVHPSA 196
            SS+   ++ WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G++DE  ++TVK+FCPKCQ VY HP     R               VDGA FGTTFPHLF MT+  ++PDPL+    +VPRVFGFRVH SA
Sbjct:    7 SSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLIQCNGQPVLPVGLKDEMGVDTVKIFCPKCQCVY-HPPPIRSRSSHHGPGGSAAGSGAVDGAAFGTTFPHLFLMTFNNLVPDPLDPASAYVPRVFGFRVHQSA 214          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A1E7FEH7_9STRA (Casein kinase II subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEH7_9STRA)

HSP 1 Score: 241 bits (614), Expect = 3.520e-75
Identity = 118/204 (57.84%), Postives = 146/204 (71.57%), Query Frame = 0
Query:    6 SSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP------SH----AAQRVDGAYFGTTFPHLFFMTYGGMIPDPLEQK--FVPRVFGFRVHPS 195
            SS+   ++ WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  +EFG CP   C GQPV+P+G++DE   +TVK+FCPKCQ VY  P      SH     A  VDGA FGTTFPHLF MT+  ++PDPL Q   ++PRVFGFRVH S
Sbjct:    7 SSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGGAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPQDSAYIPRVFGFRVHIS 209          
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Match: A0A7S3PD94_9STRA (Casein kinase II subunit beta n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD94_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.480e-74
Identity = 114/200 (57.00%), Postives = 146/200 (73.00%), Query Frame = 0
Query:    6 SSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHEA--SHELMEATCALYGLIHARYVLTTGGLEAMCAKYTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP-----SHAAQRVDGAYFGTTFPHLFFMTYGGMIPDPL--EQKFVPRVFGFRVHPSA 196
            SS+   ++ WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+   ++  SH L ++ C LYGLIHARY++T  GL+AM  KY  ++FG CP   C GQPV+P+G++DE  ++TVK+FCPKC  VY  P     ++ +  VDGA FGTTFPHLF MT+  ++PDPL  E  +VPRVFGFRVH  A
Sbjct:   65 SSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSH-LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKDFGTCPLVQCSGQPVLPVGLKDEMGVDTVKIFCPKCTQVYHTPPLRSRANVSTGVDGAAFGTTFPHLFLMTFSNLVPDPLPVESSYVPRVFGFRVHQLA 263          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBC4_9PHAE1.290e-12576.72Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
D8LK36_ECTSI4.980e-9579.39Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
A0A835ZJS8_9STRA1.810e-8460.51Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A7R9W3V5_9STRA2.560e-7656.67Casein kinase II subunit beta (Fragment) n=1 Tax=P... [more]
A0A448YXJ5_9STRA3.160e-7658.05Casein kinase II subunit beta n=1 Tax=Pseudo-nitzs... [more]
A0A7S0Y7J2_9STRA1.030e-7556.19Casein kinase II subunit beta (Fragment) n=1 Tax=P... [more]
A0A7S0GAP8_9STRA2.570e-7557.79Casein kinase II subunit beta n=1 Tax=Proboscia in... [more]
A0A7S1ZP41_TRICV2.980e-7556.19Casein kinase II subunit beta n=1 Tax=Trieres chin... [more]
A0A1E7FEH7_9STRA3.520e-7557.84Casein kinase II subunit beta n=1 Tax=Fragilariops... [more]
A0A7S3PD94_9STRA1.480e-7457.00Casein kinase II subunit beta n=1 Tax=Amphora coff... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000704Casein kinase II, regulatory subunitPRINTSPR00472CASNKINASEIIcoord: 14..30
score: 57.35
coord: 80..101
score: 63.35
coord: 31..45
score: 62.5
coord: 127..148
score: 48.01
coord: 105..126
score: 45.74
coord: 155..172
score: 68.4
IPR000704Casein kinase II, regulatory subunitSMARTSM01085CK_II_beta_2coord: 14..191
e-value: 4.2E-80
score: 282.1
IPR000704Casein kinase II, regulatory subunitPFAMPF01214CK_II_betacoord: 14..191
e-value: 1.1E-67
score: 227.4
IPR000704Casein kinase II, regulatory subunitPANTHERPTHR11740CASEIN KINASE II SUBUNIT BETAcoord: 6..197
IPR016149Casein kinase II, regulatory subunit, N-terminalGENE3D1.10.1820.10protein kinase ck2 holoenzyme, chain C, domain 1coord: 7..105
e-value: 3.9E-32
score: 112.8
NoneNo IPR availableGENE3D2.20.25.20coord: 106..179
e-value: 4.5E-31
score: 108.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..246
NoneNo IPR availablePANTHERPTHR11740:SF0CASEIN KINASE II SUBUNIT BETAcoord: 6..197
IPR035991Casein kinase II subunit beta-likeSUPERFAMILY57798Casein kinase II beta subunitcoord: 13..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:146078..152985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.10.1mRNA_A-nodosum_M_contig98.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig98 145992..152985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig98.10.1 ID=prot_A-nodosum_M_contig98.10.1|Name=mRNA_A-nodosum_M_contig98.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=246bp
MSGSSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVP
SINDSLDVILDRVSQHEASHELMEATCALYGLIHARYVLTTGGLEAMCAK
YTRQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHA
AQRVDGAYFGTTFPHLFFMTYGGMIPDPLEQKFVPRVFGFRVHPSAANGA
YGRDLGRGQGQQHERNLEERRRLRRPPPGPSGTPDMTAVASSTVAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000704Casein_kinase_II_reg-sub
IPR016149Casein_kin_II_reg-sub_N
IPR035991Casein_kinase_II_beta-like