mRNA_A-nodosum_M_contig97.24.5 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig97.24.5
Unique NamemRNA_A-nodosum_M_contig97.24.5
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: D7FJA6_ECTSI (Metallopeptidase Oma1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA6_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 2.030e-137
Identity = 194/262 (74.05%), Postives = 224/262 (85.50%), Query Frame = 1 
Query:  148 ASMVGGTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIADASGLEGCNWEFIVVKDDNMNAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKGPAYLSTHPADEERIAKQREWMDSALQTRERSGCSDLQQWGA 933
            A+++ G +I+   QD+APYT+R RFMI+ RDGEFLK +  S WA VK++ GP ILP THQA++TVERIGKRIA ASGL+GC WEFIVV+DD+MNAF LPGGKVVVFTGL EVTPN DALASVLGHEVGHVVANH GEK+SK FLKE LLL+L  VTG++YFD ARSIG LVFDLPNSREME EAD+IG+QL +KACFDP EMPETF RM AT K+K I KGPAYLSTHPAD ERIAKQ+EWMDSA+QTR++SGC +LQ+W A
Sbjct:   91 AAVLAGVVIWQVNQDEAPYTHRKRFMIISRDGEFLKGISKSNWASVKEECGPNILPSTHQATQTVERIGKRIAQASGLKGCTWEFIVVRDDSMNAFVLPGGKVVVFTGLLEVTPNEDALASVLGHEVGHVVANHAGEKLSKSFLKEGLLLLLFAVTGFEYFDVARSIGGLVFDLPNSREMELEADFIGLQLMSKACFDPHEMPETFGRMEATTKEKGISKGPAYLSTHPADAERIAKQKEWMDSAIQTRQQSGCRELQEWRA 352
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: A0A6H5L681_9PHAE (Peptidase_M48 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L681_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 5.270e-135
Identity = 192/259 (74.13%), Postives = 221/259 (85.33%), Query Frame = 1 
Query:  148 ASMVGGTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIADASGLEGCNWEFIVVKDDNMNAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKGPAYLSTHPADEERIAKQREWMDSALQTRERSGCSDLQQ 924
            A+++ G +I+   QD+APYT+R RFMI+ RDGEFLK +  S WA VK+QYGP++LP+THQA+RTVERIGKRIA+AS L+GC WEFIVV+DDNMNAF LPGGKVVVFTGL  VTPN DALASVLGHEVGHVVANH GEK+SK FL E LLL+L  VTG++YFD ARSIGSLVFDLPNSREME EAD+IG+QL +KACFDP EMPETF RM A  KK  I KGPAY+STHPAD ERIAKQREWM SA+QTR+RSGC +LQ+
Sbjct:   90 AAVLAGVVIWQVNQDEAPYTHRKRFMIISRDGEFLKGISKSNWASVKQQYGPKVLPRTHQATRTVERIGKRIAEASELKGCAWEFIVVRDDNMNAFVLPGGKVVVFTGLLNVTPNEDALASVLGHEVGHVVANHAGEKLSKNFLTEGLLLLLFAVTGFEYFDVARSIGSLVFDLPNSREMELEADFIGLQLMSKACFDPHEMPETFGRMEARTKKMGISKGPAYMSTHPADAERIAKQREWMVSAIQTRQRSGCRELQE 348
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: M1UQT1_CYAM1 (Peptidase_M48 domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UQT1_CYAM1)

HSP 1 Score: 185 bits (470), Expect = 9.960e-53
Identity = 118/277 (42.60%), Postives = 156/277 (56.32%), Query Frame = 1 
Query:  124 RQIGVVGVASMVGGTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIA---DASGLEGCN--WEFIVVKDDNMNAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKG----PAYLSTHPADEERIAKQREWMDSALQTRERSGCSDLQQW 927
            RQ   +GV +  GG + Y+   D+AP T R R + +  D E    +G + +  V  QY  RILP T   SR VERIGKRIA   +A    G +  WEF+V+     NAF LPGGKV VFTG+  +  + +++A+VL HE+ H VA HG EK++  F K  LLL +V+    D       +  L+  LP SR ME EADYIG+ L A ACFDPQ M   F RM A  +K  +M+G    P+YLSTHPADE+R+A    W+   L   E       ++W
Sbjct:   56 RQWLFIGV-TFAGGVVYYVVHIDRAPLTQRRRMIDISADQE--AAIGKANFQMVLTQYHGRILPATSATSRYVERIGKRIAASAEAISPPGVHYQWEFVVIDSPEPNAFCLPGGKVAVFTGILPILVDENSVAAVLAHEIAHAVARHGAEKLA--FAKILLLLQIVINQFIDTRLLTNLLMQLLLTLPFSRRMESEADYIGLHLMAAACFDPQAMAPMFERMKALREK--LMRGHRSPPSYLSTHPADEDRVAAIIRWLPEVLPEYEAKCLPSGREW 325
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: A0A642UQN7_9ASCO (Peptidase_M48 domain-containing protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642UQN7_9ASCO)

HSP 1 Score: 182 bits (463), Expect = 5.590e-52
Identity = 105/259 (40.54%), Postives = 148/259 (57.14%), Query Frame = 1 
Query:  154 MVGGTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIADASGLEGCNWEFIVVKDDNM--NAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKK--KRIMKGPAYLSTHPADEERIAKQREWMDSALQTRERSGCSDL 918
            ++ G ++Y+S  D APY+NR+RF+I+    E  K++G   + E   ++G  ILP  H  +  V+RI  R+  AS LE  +W+  V+ D     NAF LP GKV VFT +  +  N D LA+VL HE GH +A H  E +SK      L L+L  VTG D  +  R + + +F LP SREMEREADYIG+ + +KACF+P E    + RM    +K  K   K P +LSTHP    RI   ++W+  A   R ++GC + 
Sbjct:   47 LILGGIVYVSNLDSAPYSNRNRFIIIGPKLE--KKIGERGYRETMSEFGRHILPDNHPQTIRVKRIMDRLIRASQLEHMDWKIHVIDDPKAPPNAFVLPSGKVFVFTSILPICHNDDGLATVLAHETGHQLARHTAENLSKTPFYVVLGLLLSTVTGADMIN--RLVVNTLFQLPASREMEREADYIGLMMMSKACFNPSEAVHVWERMTRFEQKMAKGSSKVPEFLSTHPTSSNRITLIQQWLSEANSVRSQAGCDEF 301
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: A0A7J7IEP1_9RHOD (Metalloendopeptidase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEP1_9RHOD)

HSP 1 Score: 182 bits (463), Expect = 1.120e-51
Identity = 121/320 (37.81%), Postives = 174/320 (54.37%), Query Frame = 1 
Query:    1 WTARVAPSR-EFSARGATGAGRGRSPXXXXXXXXXXXXXXXGRQIGVVGVASMVGGTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIADASGLE------GCNWEFIVVKDDNMNAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKG----PAYLSTHPADEERIAKQREWMDSALQTRERSGCSDLQQW 927
            W++   PS+  F+ R  TGA    SP                +Q+ ++G+ ++ GG + Y+   D+AP T R R  ++D   E    +G + +  V KQY  R+LP T   +R VERIG+R+A AS  E         WEF+V+     NAF LPGGKV VFTG+  +  + +++A+VL HE+ H VA HG EK++  F K  LLL +++    D       +  L+  LP SR+ME EAD+IG+ L A ACFDPQ M   F RM A  +K  +M G    P+YLSTHPADE+R+A    W+   +   E      +++W
Sbjct:   29 WSSSPPPSKLYFARRRPTGAPSWGSPHT--------------KQVLLIGI-TVTGGLVYYVVHIDRAPLTQRRR--MIDISAEQEAAIGKANFQMVLKQYHGRVLPATSPTTRYVERIGRRVA-ASAEEISPPGVHYQWEFVVIDSPEPNAFCLPGGKVAVFTGILPILVDENSVAAVLSHEIAHAVARHGAEKLA--FAKILLLLQIIINQFIDTRLLTNMLMQLLLTLPFSRKMESEADFIGLHLMAAACFDPQAMAPMFERMKALREK--MMHGQRAPPSYLSTHPADEDRVAAIIRWLPEVMPEYEAKCIPPVREW 326
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: A0A1E4S9M0_CYBJN (Peptidase_M48 domain-containing protein n=1 Tax=Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542) TaxID=983966 RepID=A0A1E4S9M0_CYBJN)

HSP 1 Score: 182 bits (462), Expect = 1.800e-51
Identity = 109/258 (42.25%), Postives = 146/258 (56.59%), Query Frame = 1 
Query:  163 GTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQ--YGPRILPKTHQASRTVERIGKRIADASGLE--GCNWEFIVVKDDNM--NAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKGPAYLSTHPADEERIAKQREWMDSALQTRERSGCSDL 918
            GT+IY++  D AP T R RF+I      F + +G  ++ ++  +  Y  +ILP  H  +   +RI +RI  AS ++    NW   V+ D     NAF LPGGKV VF+ +  +  N D LA+VL HE  H +A H GE +S   +  A+ L L  +TG D F  +R I   VF +P SREME EADYIG+ L AKACFDP+E P+ + RM    K   I + P  LSTHPA E RI   +EW+  A+  RE S CS  
Sbjct:   77 GTVIYVTNLDAAPVTGRKRFIITSE--RFEQWIGKQSYNQLMAEFRYTGKILPDNHPQAIRAKRIFQRILQASPVDESSLNWSLHVINDPTAPPNAFVLPGGKVFVFSTILPICENDDGLATVLSHEFAHQLARHTGENLSSAPIYGAISLTLYALTGADVF--SRLIIDAVFKMPASREMETEADYIGLMLMAKACFDPREAPKLWNRMANWEKSTIISRMPELLSTHPASERRIENMKEWLPKAMSERENSHCSQF 330
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: L8H4W2_ACACA (Mitochondrial metalloendopeptidase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H4W2_ACACA)

HSP 1 Score: 177 bits (450), Expect = 2.290e-50
Identity = 104/248 (41.94%), Postives = 151/248 (60.89%), Query Frame = 1 
Query:  145 VASMVGGTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIADASGLEGCNWEFIVVKDDNMNAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEAL-LLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKGPAYLSTHPADEERIAKQREWMDSAL 885
            +A  +GG   +   QD  P++ R R M V R+ E  +RMG +++  +K+QY  +ILP+ H+    V+RIG+RI + + L+G +WEF+V++ D MNAF LPGGKV VFTG+  VT +   LA+VLGHEVGHVVA HG EK SK   + AL  L  +++   +         +L   LP SR+ E EAD+IG+ L A+A +DP    + + R +A +    ++K   YLSTHP + +RI   + WM  AL
Sbjct:   27 LAIPLGGYGYWQYYQDIVPHSGRRRMMDVSREEE--QRMGLASFHLLKQQYKDQILPENHELVLAVKRIGRRIIEQTDLQGLHWEFLVIQSDEMNAFVLPGGKVCVFTGILSVTQDEYGLATVLGHEVGHVVARHGAEKWSKMRWERALGWLTAILIAREEPGWLINQFLTLFLALPFSRKFEHEADFIGLMLMAEAGYDPTNAVDLWIRFSAASPS--MLK---YLSTHPPNADRIVLLKRWMPQAL 267
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: M2XY90_GALSU (Metallopeptidase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY90_GALSU)

HSP 1 Score: 181 bits (458), Expect = 2.760e-50
Identity = 99/243 (40.74%), Postives = 143/243 (58.85%), Query Frame = 1 
Query:  160 GGTMIYLSCQ-DKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIADASGLEGCNWEFIVVKDDNMNAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKGPAYLSTHPADEERIAKQREWMDSAL 885
            GG  IY     D APYT R R + + R+ E    +G   + +V       ++P +H  S  + RIG+R+A  +  +  +WEF+V+     NAF LPGGKVVV+TGL  +TP  DALASVL HE+GH VA HG EK++  F+K   +L  +V    +       + +++ +LP SR++E EADYIG+ L AKAC+DP+E P  F R+     K+ +   P YLSTHPAD+ R+ + + W+   L
Sbjct:  132 GGCGIYYYVHLDYAPYTGRRRMIDLTRNQEV--SLGTQQFRKVLAMEASHVVPSSHPLSVRILRIGQRLAKVADQKDFHWEFVVIDKPVANAFCLPGGKVVVYTGLLPITPTDDALASVLAHEIGHAVARHGAEKLA--FMKVLFILQFIVNIFVNTHALNSFMINILANLPFSRKLETEADYIGLHLMAKACYDPREAPHVFERIA----KRNVNSPPEYLSTHPADKHRVERLQSWLPQVL 366
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: A0A1E4TSA5_PACTA (Peptidase_M48 domain-containing protein (Fragment) n=1 Tax=Pachysolen tannophilus NRRL Y-2460 TaxID=669874 RepID=A0A1E4TSA5_PACTA)

HSP 1 Score: 176 bits (445), Expect = 1.510e-49
Identity = 107/275 (38.91%), Postives = 155/275 (56.36%), Query Frame = 1 
Query:  124 RQIGVVGVASMVGGTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIADASGLEG---CNWEFIVVK-DDNMNAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKGPAYLSTHPADEERIAKQREWMDSALQTRERSGCSDLQQWGAA 936
            + IG+V + S  GG   YL+  D+AP + R RF+ V    E  KR+G  T+ ++  QY  ++LP  H  +  V+RI +RI  ASG E     NWE  V+  +D+ NAF +PGGKV VF+ L  +  N D LA++L HE  H +A H  E +SK  +   L L+L  +TG D  +    +   V  +P SREME EADYIG+ + ++ACFDP E P+ + R +   + K   + P +LSTHPA + R+    +W+  A   RE S C     +GA+
Sbjct:   23 KYIGIVVIFS--GG--FYLTHLDEAPVSGRKRFICVSESIE--KRIGQYTYNQIMSQYRRQLLPSNHPTTLKVKRIMERIISASGTEEDPLVNWEIHVINSNDSPNAFVIPGGKVFVFSSLLPIAKNDDGLATILAHEFSHQLARHSAENLSKAPIYSLLSLVLYTITGSDTLN--NLLIRSVIAMPASREMETEADYIGLMIMSQACFDPHEAPKVWQRFS-DYESKTGNRVPEFLSTHPATKRRLENMNKWLPEANMKREASNCGAYGAYGAS 288
[Close]
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Match: A0A4P9ZRH9_9FUNG (Peptidase family M48-domain-containing protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZRH9_9FUNG)

HSP 1 Score: 175 bits (443), Expect = 1.760e-49
Identity = 95/245 (38.78%), Postives = 140/245 (57.14%), Query Frame = 1 
Query:  175 YLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYGPRILPKTHQASRTVERIGKRIADASGLEGCNWEFIVVKDDNMNAFALPGGKVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLMLVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQEMPETFARMNATAKKKRIMKGPAYLSTHPADEERIAKQREWMDSALQTRERSGC 909
            Y++  ++AP + R RFM V    E ++ M   ++ E+ +++G ++LP +H+ +  V R+  RI  A G+E  +WEF V++    NAF +PGGKV VFTGL  +  N D LA+VLGHE+ H +  H  E++S G     + +++ +     +    R    L   LPNSR+ E EAD++G+QL A+ACFDPQ     + RM   AK  +      YL THP+ E RI K R+WM  A Q R  S C
Sbjct:    5 YVAHLEEAPISGRRRFMAVSN--EDVENMAKHSYQEIMREFGHQMLPASHRYTAFVRRVATRIIKAGGMENLDWEFHVIESPEANAFVIPGGKVFVFTGLLPIVKNEDGLATVLGHEIAHQLLGHHAERMSYGQFLSIIQMIVSIFFDPTFSGFNRMFLELGILLPNSRKCETEADHVGLQLMAQACFDPQAAIGVWERM---AKLNKFKGSFEYLQTHPSSEGRIEKMRKWMPEAEQKRADSDC 244
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig97.24.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJA6_ECTSI2.030e-13774.05Metallopeptidase Oma1 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5L681_9PHAE5.270e-13574.13Peptidase_M48 domain-containing protein n=1 Tax=Ec... [more]
M1UQT1_CYAM19.960e-5342.60Peptidase_M48 domain-containing protein n=2 Tax=ce... [more]
A0A642UQN7_9ASCO5.590e-5240.54Peptidase_M48 domain-containing protein n=1 Tax=Tr... [more]
A0A7J7IEP1_9RHOD1.120e-5137.81Metalloendopeptidase n=1 Tax=Cyanidiococcus yangmi... [more]
A0A1E4S9M0_CYBJN1.800e-5142.25Peptidase_M48 domain-containing protein n=1 Tax=Cy... [more]
L8H4W2_ACACA2.290e-5041.94Mitochondrial metalloendopeptidase, putative n=1 T... [more]
M2XY90_GALSU2.760e-5040.74Metallopeptidase n=1 Tax=Galdieria sulphuraria Tax... [more]
A0A1E4TSA5_PACTA1.510e-4938.91Peptidase_M48 domain-containing protein (Fragment)... [more]
A0A4P9ZRH9_9FUNG1.760e-4938.78Peptidase family M48-domain-containing protein n=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig97contigA-nodosum_M_contig97:302101..315654 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FJA6
Preferred nameOMA1
PFAMsPeptidase_M48
Model size963
Max annot lvl2759|Eukaryota
KEGG koko:K09500
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006508,GO:0006515,GO:0006807,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0019538,GO:0019866,GO:0023052,GO:0030163,GO:0031090,GO:0031929,GO:0031966,GO:0031967,GO:0031975,GO:0035556,GO:0035694,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051603,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Exons9
Evalue3.33e-138
EggNOG OGsCOG0501@1|root,KOG2661@2759|Eukaryota
Descriptionnegative regulation of mitochondrial fusion
Cds size963
COG categoryO
BRITEko00000,ko03036,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig97.24.5prot_A-nodosum_M_contig97.24.5Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig97 302101..315654 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870490.6661701-CDS-A-nodosum_M_contig97:302100..3021751680870490.6661701-CDS-A-nodosum_M_contig97:302100..302175Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 302101..302175 -
1680870490.6803076-CDS-A-nodosum_M_contig97:302716..3028451680870490.6803076-CDS-A-nodosum_M_contig97:302716..302845Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 302717..302845 -
1680870490.692794-CDS-A-nodosum_M_contig97:303810..3038851680870490.692794-CDS-A-nodosum_M_contig97:303810..303885Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 303811..303885 -
1680870490.712363-CDS-A-nodosum_M_contig97:304232..3042851680870490.712363-CDS-A-nodosum_M_contig97:304232..304285Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 304233..304285 -
1680870490.7267897-CDS-A-nodosum_M_contig97:304753..3048141680870490.7267897-CDS-A-nodosum_M_contig97:304753..304814Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 304754..304814 -
1680870490.7374568-CDS-A-nodosum_M_contig97:313767..3138841680870490.7374568-CDS-A-nodosum_M_contig97:313767..313884Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 313768..313884 -
1680870490.7500887-CDS-A-nodosum_M_contig97:314261..3143871680870490.7500887-CDS-A-nodosum_M_contig97:314261..314387Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 314262..314387 -
1680870490.760406-CDS-A-nodosum_M_contig97:314688..3147771680870490.760406-CDS-A-nodosum_M_contig97:314688..314777Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 314689..314777 -
1680870490.7706928-CDS-A-nodosum_M_contig97:315416..3156541680870490.7706928-CDS-A-nodosum_M_contig97:315416..315654Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 315417..315654 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig97.24.5

>prot_A-nodosum_M_contig97.24.5 ID=prot_A-nodosum_M_contig97.24.5|Name=mRNA_A-nodosum_M_contig97.24.5|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=321bp
WTARVAPSREFSARGATGAGRGRSPKSRGTKKQGRGSQDAGRQIGVVGVA
SMVGGTMIYLSCQDKAPYTNRSRFMIVDRDGEFLKRMGASTWAEVKKQYG
PRILPKTHQASRTVERIGKRIADASGLEGCNWEFIVVKDDNMNAFALPGG
KVVVFTGLFEVTPNSDALASVLGHEVGHVVANHGGEKVSKGFLKEALLLM
LVVVTGYDYFDAARSIGSLVFDLPNSREMEREADYIGMQLTAKACFDPQE
MPETFARMNATAKKKRIMKGPAYLSTHPADEERIAKQREWMDSALQTRER
SGCSDLQQWGAAGNHRNQRW*
back to top

mRNA from alignment at A-nodosum_M_contig97:302101..315654-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig97.24.5 ID=mRNA_A-nodosum_M_contig97.24.5|Name=mRNA_A-nodosum_M_contig97.24.5|organism=Ascophyllum nodosum dioecious|type=mRNA|length=13554bp|location=Sequence derived from alignment at A-nodosum_M_contig97:302101..315654- (Ascophyllum nodosum dioecious)
TGGACGGCACGTGTTGCACCATCAAGGGAATTCAGCGCTCGAGGCGCTAC
CGGCGCAGGTCGAGGTCGATCGCCAAAGTCGAGAGGAACGAAAAAACAGG
GCCGAGGATCCCAGGATGCTGGCCGACAGATTGGAGTTGTAGGGGTGGCA
AGCATGGTTGGAGGAACAATGATTTATTTGAGCTGCCAGGATAAGGCGCC
GTACACGAACCGTAGCCGATTCATGATCGTAGACAGAGGTGAGCCTTGAC
AGTGGTATGAAGTCCCGGTTCTGAACAACTACCTGGTATAAAGTAATACG
ACTATTGTAGTGATACTGATTATTGCCGTTGTCGAATCTAATGTGATCGT
CATAGCCGGGTTGCTCAGGGATGGATTTTGAACGTATCTACGCCCAACGT
GTAAGAAATTAAGCAGGAACCACCCCGCAGAACGAACCATCTCTCTGAGC
CTGCAACAAACAAATGTGTCTTCTTCTGTTTCCTTTTTGAACATCATACG
AGAGCTAGTGGTGCCGAATAAGCGCTGCCTATAGAGCTAACATTTCAACG
AAGTAATGGGAGCATGCTGCGTTTGCGCGCGATAATCGTAAATACAAAAT
GCTGATGTGGTAAATACACAACGTTGTTTTACCCTCATGAAGCATTGCAA
ACCTACGATGCAGTTACGCGAGGGCTTCTAGCGACGTGCGTTGAGCCGTG
GTACTGTACGAGGTAGCTCTAGAGGTTGATACTTGGCTCGATAATACACT
ATGGTAGCAATCGTCACAACTTGGCTGGCGCATAAAATATGTTATCTCGA
GAACCATTGACATGTGATACGTTCGCTTTGTTGACGTATGGCTTGACTGT
ATCTTCTCTTCATATTTGGTAGTGCAGATGGTGAGTTCTTGAAACGAATG
GGTGCGTCCACGTGGGCGGAGGTGAAGAAGCAATACGGTCCTCGAATCCT
GCCCAAGACCCATCAGGTCAGAAGAAAGAAGTTTATTCGGAAACCTTTAG
GGAAAAAGTAAAGTACATTAAAACATTTGTTGAGGTGCTTCTGAATACAC
CCATCACCAGCTTTCATCAAATCGCTCGTATTTGACGATAATCCTTATCG
TACAGAGTGGAAGCGCTAATGTCTCAGGGGTAAGATGTAGGTTGTAGGGC
CATGAAGAATCGATCGAGGAAAGTATAGCCTCTTGCCATCTTGCCATGTG
ATTTTTGGGGAAGAAATGGATACTAGTGCTTGTGCTGTATGAACCAGTAT
AAAATTAAATTGTGCAGGCTTCAAGAACTGTGGAGCGAATCGGCAAGCGT
ATCGCAGATGCAAGTGGGCTGGAGGGCTGCAACTGGGAGTTCATCGTCGT
GAAAGACGACAATATGAATGCGTTTGCGCTCCCAGGAGGCAAGGTAGGGC
ATGACGAGGCAAAATAGGGCAAATAAGGCAAAGTAATGTAATTTAGGAAA
ATGTGAAGCTAAGTAAGGTAGGGTGATGCTAGGTGTTTTCTTAAGGCTAG
TAACAAAGTTCTAGTTTATCCAATCAAGAGATCCCATGCTTGCACACCAT
GCCTTGCCTTTCCATTTCATAGGAGAGTCCCAGAGAGCCTCATGAGCTTT
CTCCAGAAGCTGTGCGCTTACCCATCGGTGCGATCAGTGTCGCTCAGAAA
TGTACAGAATTGTTAGTTACTTGATTTGTCCGGGTTGGCGCACTGAAGAT
TTGTGAATGACGACTTACGTCTTGATTCATACCTGCATCGTGATTGTCAA
ACCGCGCGATTTTTGTTCAGGTCGTTGTGTTCACCGGACTTTTCGAAGTT
ACTCCGAACTCGGACGCGCTAGCCTCGGTCCTTGGGCACGAGGTGGGACA
CGTTGTGGCAAACCATGGAGGGGAGAAGGTTAGTAAGGTGAGACCATTCA
ACTTGAGTTGTCTATAAGTAATCCTTGTCGTGTTAAGGCTCGCTTTATGG
ACAAGCCTTCTCGTCCGCTGTTTTGAAGAACTGTCTGTTAGTTGTCAGCG
ATGCTATCCGCGTAGCCATGTAATTGACATACAGTATTTCATTCGCCATT
CGCCCTAATGCTGCTCTCGCTCCTTGGCCATGGGACAGAACTTACGTTTC
GACTGTTTTTTCACTTTATCACTACGTACAAGTGCTTATAGGTCATCTAA
TCTTCCAGCAGAGACTTTGCATTAGTTGTGTTTAAAGAAAAATCAGACCA
CACCTAGACCTTCTGAGCATCCCCCGGTTATGGGGAAAAAAATGTCAAAA
CGTTCAGGTGGGATCAAAAGGCTGCAAATACAAAACCACTTCATGGCATT
TAAACAGGTTCCCCGATGCAGATAACATTGGGTCCACAGTATAATGTCGG
GGAGAAACCCACCGTTATACTGTACATTTACATTAATTGCCATGTAGGGA
CACAAGAAAAGCATTAGTAGCAAACCAGAGACAATGTAGTACACCATCCC
ACATGGTAGTAGTAATATACTAGTACATTACAAAAGCTGTAAGTACAAAG
CCACTACATGGTATTTAACCGGGTTCCCCACTGGTAGTAACCTTGGGTCA
ACAGTATAATGTCGGGGAGAAACCCACCGTTATACTGTACACTTATATTA
ATCACCATGCACAGCCATCAATCATATCTCAACCTAACCACAATAATACA
TAGTTACGAGTGTAGTTCTACTATCGATATTAGTACCATGAGGACATACA
CGAATAGGGGCTTGGGTAAATAGCACATTAGTATACTGTATAATTTCCAT
ATTTGTCATACTGGGGTATTCAGAGGCTACAAGTATGAAACCACTTCCTG
GTATTTTGAAAACAGGTTATATTAATTACCATGCAATCCCCCCCCAAAAA
TAAATAAATAAATAAATCCCACCCAACATAACCACTATAATACTGTAAGA
TGATAGTATTAATGTCGATAATAGTAACATAGAGTCATGCACGAGTAAAG
GCTTGGGTAAACGATAAAATGTAGGGGAGAGATCCACTAGTACTATATTA
TACAGTACAGTACACGACCATTAATTATGGGGAGCTTGGTTTCCAACTTA
GTTTAAAGGAGAATAAAAAACGTACCGTTAGTTATAGGGAGAAGATCAGG
ACACATGGTATTTTAAACGGGTTCCCCGCAGGTAGAAACCTGGAGTTAAC
AGTAATTGTTGGCGAGAATCCTAGCACTATGATATTAATCATCATTCACA
ACCACCAATCATACCTCTACATAACCACAGTAATACAAACTCAGAAGGTC
TAGGTGTGGTCTGATTTAAGTTACAGGTATAATCCTACTATCGAAGTACC
ATCAAAACCACCCGGGATAGGGGTTTGGATAAATAGTAAAGTGTACACTT
GGGTACTAAAGTTTCCGTAATTATCATGCAAGGGTATTCAGAGTCTGCAA
GTACCAACCCTCTTCCTGGCATTTAGACTGGTACGTTTGGGTAAACAGTA
GTGTGGCCTGATTTTTCTGGGGGGGGCGTCCACTAGTATTATATTATACA
GTACTGTACACTACCATTAATTGTGGGAAGCTCGGTTTACAACTAGTTTA
GGGAACAAACACAGAATACACGGGAAGCTTGGGTTACACCTTGGTTTCAG
GTAATGGCAAAACATTTAGGTGGGATCAAAGGTTGCACCTCTAGGAACGG
GTAAGTGTCACTGAAAAGGTTTTTCAGGTGGTGTGTATGTAGACGTGATC
CTAGTACATATCAAAACACGCCTGGACCTTCTGGGCATACAAACGTTTAG
ATGGGATCAGAGGCTGGGCCGACAGTATAGTAACATTAATCATTATATTA
TACAGTACTGTACACTACCATCAATTATGGGAAGCTTGGTTTACAACTAG
TTTAGGGAACAAAGACAGAATACACGGGAAGCTTGGGTTACACAACAGTT
TCAGGTAATGGTAAAACATTTAGGTGGGATCAAAGGGTTTTTCAGGTAGT
GTGTATGTAGACGTGATTATGTAGACGTGATCCTAGTACATATCAAAACA
CGCCTGGACCTTCTGGGCATACAAACGTTTAGATGGGATCAGAGGCTGGG
CTGACAGTATAGTAACCTTAATCATCATGTTAAGTGCACAAGAAAAACAG
AAGCAATATAGTACCCCATCAAGCATGGTGTTTAAAGAAAAATCAGACCA
CACCTAGGCCTTCTGAGCATCCCCCCCGGTTATGGGGAAAAAATGATCAG
GTGGGATCAAAAGGCTGCAAATACAAAACCACTTCATGGCATTTAAACCA
GGTTCCCCGATGCAGATAACATGTTATAGAGATGGCTATATAGTCCAGTA
ACATTTTACCACATGTCTTGCCATTTGGGAACTTTTGAAAGAAAGAAAGA
AAATTCATTAGGGAACTTTATACAGTATTGTTCACTACCTGTTTCATTCT
TTTGATAGCAGGGTGATTACAACAAGACGAGTCCTACATCAAAAAGATTG
GAGATTACATATGATTTTGGTTAAAGGCTTGAAACGGGAAGGGTTGTTCT
AGGGTCGAATGGTATATATAATTTATTAGTGTACAGTCCTATGTATTCAG
TACAATTACAAATGATACGGATTAAGGGTTGAAACGAGGGGCAAGAGGAC
CCTGATGTAGATATCTTCAACATGAGCCAGAATGTACAAGACACCGTTAT
TCACCTGGAAGTAGACGAAGAGCAGTGGGCGATCACACAAGGAAGTAAGA
GGCAAGCCAGGTGGGTATGGTCCCCACGCACGATGTCAGGTCTACGGCTT
CCAGATACTCCTCATGCTCAACACCACAACGATCCACGCGTTTAGACCGG
AAACAAAAGAAGGAGTATCTAGCTAGCCCATGAATGACACACGTAGGCGT
TGCCTCAAACAAACCGAGGTGACCACACTTCCTAAAAAGTCCCCCATGAA
GATTCAGCTTCGATGAAGCCACCTCATCCAGAAAAATACTCTTTTATTCC
GAACTGTCGTGCCACACCGTCGGCCTTCTTCCATCTTCTTGCAGAGCGGG
ACTATGATTACACAATGCTTCATCATGTCCGTAGTCCCTCCGATCTTCCG
TGCCGATCTTCAATGTAGCGCGGGTTATATTATTAATATACTGTATTTTA
AAGAAAAATTTAATCAATACAGTATACTGTATTGTTTCTAAAGAAATGTA
TCGGAAACGTTTTTCTGTCCTTTGGTTTACCATTCTTACCATCCAGAATT
TGAATGCAAGCGTGTAAGATGGAGGGTCAGGGGTCTAATGATTTACTATA
ACGATACGAGAAGAATCAGGTGTGTTCTGATTAGGCCCTGGGTACGAGCA
GATGAATAGGTCAGTATTTTCAGGTTATCGTGCATAAAAGGTCGTGGTTC
TCATTAGCTGTATGAGATCGTATTTTGTATCGGAAAAGCTTTTCTGTCAA
CCAGAATTTGAATACAAAAGAACTTGAAAATAATATCTTCTAATAAGAAA
ATAATATCTTTTAAGAACGGTCATGACATCTAATAAGCTAATCATCTTTT
TAACAACCAGAATTTTCCATCTAGAACTAAGGTGTGTTCAGATTTTTCTA
CATACAAACGTTAAGACTTGAGCAACCCCCGGTTTAACCACGCAGCAGGT
GAACAGAGGAAAAAATCGATCTGTGTGTTCTCTCTGGGTCCAAACAACGA
TGAATAGGTCAGTATTTTCGGCTGGGTGCGTATTCGTTATCGTGCATAAA
AGGTCTTTCTCAAGAAAATAATATCTTTTAAGAACGGTCATGACATCTAA
TAAAGAATCATGTCTTTTAGTTTTCCATCTAGAACTAAAGGTGTGTTCAG
ATTTTTCTACATACAAACGTTAAGACTTGAGCAACCCCGGTTATGGGGGA
AAAATCGGTGTGTTCTCTCCTGGGTCCAAACAGATGAATAGGTCAGTATT
TTCAGGTTATCGTGCATAAAGGTCGTGGTTCTCATTAGCTATATGGGATC
GTATTTTGTATCGGAAAAGCTTTTCTGTCGTTGGATTTAACAACCAGAAT
TTGGATACAAAAGAACTTGAAAATAATATCTTTTTAAAACAAATAATATC
TTTTTAAACAACATGTACGATGTATGTCATGACATCTAATGAGTTTTTAA
GGACGAAGTATCATGTCTTTTATTTTTCCTCTAGAACTTAAAGGTGTGTT
CAGATTTTTCTACATACAAGAAGTTAAAAAAAAAAAAAAATGGGGCAATG
GTAGACCTTCTGAGCACCCCCGGTTATGGGGGAAATAAATAAATAAATAA
AAAATGTCAAAACGTTTAGTAAATAATGCTATAAGTAGGTGAGTAGTTGA
ACAAACAGTTCTTCATTATTCATTCATTCAGTACCCTTACCCTAGTGCAC
ACTTAACCCCTTATAATTCTACCCCAGAGCTCGAGTCGCATTATAATAGA
TGTCCGACGTTAGTATGTGCCAAAACATCCTACGGTCGTGTTTGGATGTT
GGAGCACCTAATATTTTACTCGTTTTCCAGAACGTACTTTGAAAATTGAA
CAGTTTTCGACGTAATAGTTTCAGGTCATACCCATTTGTATACATATCCC
TGATTAATCTAGACGCAGCTTCGATGAAATGCTGTCTCTGTGTACATCGA
TATGCGAAACGGCATAGTTGACTGTGTAGGACAGCATACTTGCATCTTAT
CGCTATAGTAGTCTCGATATGGGGGAACTTTCTATACGAAGCCAGGGTAG
GCATGTTATCCCGCTTATCATACATTTTAACCTCACAAACCCCCGGAAGT
GGTTGTATTATTTTCATATCCAAAAAATGCACACTAGGTCCAATTTGTTC
ACGAACAATCGAGATAGGTGAAGGCCGTACACTACCATCGAAATCACGAA
CCGTAGTCGGGTACATACCAGAGAAGACACCATCTTGTAAAATAATGTCT
TGTAACGTGGGTCCAATCGTATGACCAAGAGAGACCGTGATAATGTCATC
AATATACCGCTTAGTACTACCGGCGTATTGGGAAATGAACTCAAAAGGGT
AACGTCCTGGTCCATACTGTTTATACTCATTTACCATATGGGTAAGAAAA
CCGTACTCATGCCAAAACGCAAAATCATTCGCTAGTTCCGGGGCTGGAGA
GGTCCCCATGAACACTCCAGACGTCTGTCGGTACATGTAAGGGCCAAACT
GGACACAACCTTCATTAAGTACGCATTTCAACCATCTAAATATCGTATCA
GGTCCCACCCATACATGGCTTTTACTATTAGCTGTAATTGGTTGGGGTTG
CTTGGAGGACCAAGAAGCTTCACGAGCGACTGGACATGTATGATCATTAG
CATAACTCCAGCGTAGTTCTATTGAGCGTAGGCCATGTTGGCTTTGGTAC
TTAAAGGTAGACTCTAGCAACTTGAACATAGTCTCTTGCAAGTTCGCATC
AGGCAAGTTTGGGTATATAGCTTCAAAATCATACGTTTCAAACCTATGGT
GGTACTTCGTACCAAGGCGGGAATTAGCTGCAGCATCAGAGTTACGGACA
ATATCGATGATTTCTGAACCGGATGATGTAATCCAACATTCATCAGAGAA
GATACCAATCTCTACACATTTATCACGCCATAGGGCATGCATAACCGGTC
TAAGTGCCGCTAGGCAGGCGTTAACAATCTTGGCAACCCCGTCCATAGGG
GATCCACAGCATGCAGTAATCCCTCGAGTCGCAACCGGGTTCTTATGTAG
TTTCGCTGTAATGTAACGTACTGGTAGCCTATCCGTTGGGACTAATATAG
TCGCAGGGGGGTCCTCATCGCTCTGTTTGCGTACCAGTGGGATAGGCAAA
TGTTCCTGTCTTAGGAAGTCGGCCTTAATCGAGGCAAGGTCTACACCTTC
TATTCTAGAGTACCCTGGTCCCTCCATCTCATCTGTAGCAAGTTGTATAT
AGCACGACTTACACATGATACACAAACAGTTTGAAGCTTTGTCCACCCGG
GTGAAAACCAGGGATTTCTTCCATCTGCTAAAAGCATTAGTGGCTGATGC
AAAGTCTATCCAGCCAGTAAGAGGTTTTGATTCCAATCCCCCCTCGTGTT
CATTTAACCTCGTCCTAATTTCAAGGATTAGTTCCTTCCTCCAGGGTTGA
ATATCCGTATCATTTATATTAAAACGACTACATAGCGCCTTAGAATGGTC
AATAATCGAAAAGATAATCGAATCTTGGTATGATTTACCCGGTAAACAGG
GGGCAAACCCAAAGCGGAAACCTGCTTGCAGTTCAAGGATTGCCTGAGCA
TGAATGTTTTCAAGACAACTAGCGTCAGTAGTAATTACCATCCTGCGTCC
AGTCTTAGTCAGCTTTACATACGGTTGCCAGCGTGGCATGTGGCATATAC
AAGTAGATTGCTGGTCAGGGTTCCTACCTACGTTGGTAGTATTAATCACC
ATACGATCCATAGTTTCACCATAGAAGAATGCCGGGATAGTAGTGCGTAT
TGCATCTCTAAAGTCACCCTGCGGTAGGAGAGCAAGCAAGGACGGGTCGT
TGTATAACGCTCTCAGCGGTATAATATCAGCTAGTGTACTTGTGTAGCCT
ACGATATGAAGGCGGGGGGGGTGGAGACCTTAGGCACCGGGAATTTGCTC
AGGTACCGTTGTCTAAGAATTCCAAATATCTCTTTAAGACCGTCTTCCCA
ACGAATGCTAGACAAGTGCTTCAGGGTACGTTGGATTGTCCTACAATGCA
AGGAAGATATGTACTTCTCTACTTCGTTAGGTCTATTCTCCATCAGGTTC
TTAAGGTACGCCGTTCTCCTACTCCCTTCTTTAGTCAAGTAACGTGCTTG
TAAGTTTGGGATCTTGATACGGTCCGGTTGTCTCGATCTCTTGATGGGCA
AATCCATGGGGAGGGACTAGTGGGGCAGCAGGTTTAGCGATCTCTCGACG
CTTATTATACCCTGAATGTAAGGTATCTAATCGGGAAATCCATGAGGATT
CCCGTTCACGATACTCCTGGAAAACAGTACCCTTAGGGATTTTTTCAAGT
AGAAGGACTACAAATCTGTTAGGGTTGTCCCGTAGGGATCGTCCGAAATG
GCTAGTATCATCCATGACATGTTCCTGAAACCGTAAGAACGGGCTAGGTG
TAGTACGACCCACATACGCTCTTCCATTACTTAGGTTAACTATGGCATAA
ATACTCCACCATGATGGGGAAATCGGCCTAAGTCCTCTAGGACCTTTGCT
AGATACATACTGAGCAAGTACGTTATGCTTTTGTGCAATCAAAGCACCTG
GTGGTAGATGTGATCCACCCTCCCTTTTCACTAGCCATCGTTGGCGAATA
TCCATCATCCGAGCTAGGTTTGGGTGTGGTCGTTTTACGCTTAAGATCTT
CTTTGTCTTCTTGTACGCAGATCGCATGATGTCCGCAGGGGAGTTTTTCG
AGGGGGTCTTGTGAACGTAATCATGGGGTCGCTTCTTTTTACGCTTCATA
GGGTGTCCTAGTTGTACCAGAGGTGTGCCTAAAACATGGGATCATTGTTT
ACGAGTAGGAACGTTGGGTCAGCTTTGGGTCAGCATTATACTACGAGGGG
GAGGTGTTAATCTACCATACCAACTCGTTTAGGTGTTTAAGTTTGAAGGT
GTTTTAAGTTATCTTACGTGTTGATTATATGTCAGCATCATTATTCCTAG
ATAGGTCAGGTGTCGGTAATGGTACGAAGTCCAATACCGTACAGTACAGT
AATTTCATTGGTCCATCTGAGCTACCCTTAGTTATCTAGTTACAGGGATT
ACAGGTAATATATATATATATATATATAGCTATCATCGTGCATATCATTT
GGGTTCGGTATATTCTAATTAGCTAGCTCTTGCAAAAACATTGTCACAGC
CACCTGACACTATTTTTCCAGGAGCTAGATAGGGTGATTTTGATACAAGG
TAATAAAGAGAAACACATAACCACTATCCGTAGCGAGGCTGAGAGGGTCA
TAAACCACTCTCTACCAGTATGCCACCCCTTAACAAAAGTCATGGGCGTC
CAGCACTACAGACCTTACGAAGCATTCCTCTTGGGGTCGCATTCGTCGCT
TGTCGTGTTTAAAGAAAAATCAGCATTAGTTGTGTTGTTGTAGTTACAAG
GGCTTAACCATTAGATCTAGACTAGTCACTGCTCATTACTGGATTAGATT
AGCCCTGCTAACTACAACAAAATATATGCCTTGGACTCTCTGGCCTTTTT
CTGGTAGCGACAGTGATCTCCGGGGCGTCTCCCCTCGCCACTGACCGGCT
CCTTGACAAACAGACCTCGCGGCGGGTTTCGAGCTCACGAATTTTGTACA
TCTGTTCCCAAGGCGATACCCATAAGCTACTTCGTCACGTGACTGAGTAG
ACTCATGAGTTAGCTCTTCTAACTATAACAAATATATAACTTAGGCTCTC
TGGCCTTTCCCGGTAGCGAGAGTGACAGCGATCTCCGAGGCGCTCTCCTC
GCCACTGACCGGCTTCCTTGGCAAACAGTGCTCGTGACCTTTTTTTTTTC
TAGAATGCGACTTCCAGTAAGAGTAGAGCCGAGCTTCGAGAGACGAAGGG
TCACCTGCCAGAGAGCAGGGGGCAATAGCGGTTAGGGGAGATGCCCTAGA
GATTACTATCGCTACCGGGAAAATGTTAGAGAACTCAAGACATATCTTTT
GTTCGTTTGAAGGGCTTACCATTAGACTACTCTTCTTTAAAAAAAAATCA
GACTGTAACAAGATCCGTGGCACTACGTGTACATTTCGTTTCGTATCGTA
TCGTGCCTCTCACTCAAGTTGCTCTGAAGTTGCTCGTCCCTGCACCTCAC
CATTGTGTCCTTGTTATTGACTATACAAATTGCTTTGCAGGGCTTCCTGA
AAGAGGCGCTGCTCCTAATGCTCGTCGTCGTCACCGGTTACGACTACTTC
GGTACGTTTGTTGGTTGCCATCGACGATGTTCAAACTTCGGTAGGGTGAC
TATAATACTTCGGTTCGTTGATTGTCTCCCGCAATTCGATAAAAAATTGG
GTAGGTTGAGCTGGCAAGAAAGCTCTATCCTGATACCTTTCAGGCCAAGT
CTGTGGTTGTAGTTGACACCAAGGATCTCCAAGCCGTCGTTGGAAGAAGA
CTCATGGACCCCCCCCTCACAATCGAGGAAGGTGTGTCTCAAGTCGCGAA
ACAGTACATTACAGGCGTAATGCACGTAATGCACCCTCATCATTGAAGCG
TACACATGCTGCATGGCACCAAGGAAGTATTTAGTGGTGTAATTTACCCG
TTCTTGACACTTCGGCGTCCGTCTTCGTGATGCCTTGCTCCACTCTCAAG
CTTTCGCCAACGCGAGTTTCACGCGTGAATTACTATACTTGTACCTTTCT
GTGTTCCATTGTGCCCTAGATGCGGCAAGATCAATCGGGAGTTTGGTGTT
TGACCTGCCAAATTCGAGAGAGGTACGAAAGACATCGAGCTATCGACCTG
AGCATTTTTTTTTGTAGCAGACGTGCGCGGTTTCCGCGAGATTTCCAAAC
GTCGGTACAGTATAATACGATACAATGTAAAGAGTAGATTTTTTAAGCGT
GGGTCGTTCTACTATGAAGTTAACCTGTGCCATGTAGGGGCTATTATTGA
TAGTGGCTTAAGTGCTGGAGTTGTTTTGCGTTATGTGCTCAAACCTTGAG
CCTTGTCGTCATCTGCACGTGCTTCTGTGGCGTGCTCGTCACCATGTACC
TACATGACTCGCCAGAAACTCTTCATTTATATTACGTACTCATGGTAGCG
TTGATGGAATGATGGCCAGATGGAGCGCGAAGCGGATTACATCGGTATGC
AGCTCACGGCGAAGGCGTGCTTCGACCCACAAGAGATGCCTGAGGTATAC
CGACAGTATAGCAGCATTGTGGCCTTTCATCAGCGGCCACACTTCCGAGT
AAAAACCCATGCCTTATAGAGCTACGCAGTCCCGGAGGAGTATAATCCCC
TCATGACAAAGCGACGTGCTCGGTTGCGAAGTGTCTTAGAATTCTGGCGA
TGTAAATTACTAAAAGGAGATGACCGTGTGGGGCGGTGGCTTGCGGTTCT
CCGTTGCACGTACAACCCGCGACACCCCCCCCCCTCGCAACGTCGGAACA
AAGGAACGGGCCTTTGTTTCAGGTTTTGCCAAAAAACGCGTTAGACTCTA
CTCCACTTTTCCTCCGGTACTTTCAGCATGCCCACTTCGTACCAATAGTG
GGTGTGGGAAAAAGGAGGCGCACATTGATTGGTCCATGGTGATACCTGAA
AAGGCAGCACCCGTTACTTGAACTACCTTGAGAACTACTGGTTCTGTGCC
AGCGGACTCTCGGCAGTGAACGCCAACCGTACGCGATTTCGTGACCTGAT
AAACTCGGGACTGACCCGATGGCGTATGGCGGTATAAAGAAATGGACGCC
GCCGTGGAAATCGGGAGGAATCCCGTGAGTAAGCACCAGGTTCAGCCTGA
GCGTGAAGAATGAGCAGGCTGACGTGGGACGGGACGACCGAACTCGTCTC
GCGAGACCAAATTCTCAGGCGCGAACGGGGACAGAGAAATAGTCATTTTC
CCTGCTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTAATCCA
TACTCTATACTCTGCTGCATGTGATGACCATACATATTCTGCTATAAGTG
ATGACCATACATACTTGCTACAAGTGATGACCATACATACAGCATATTTT
AGTAGTATTCTTTCATTGAAGCGGTGGCTTTGCAAGCCGTGCACATAGCG
TGATGTCAAACTAACACATTTTAAATGTTTCTCGCCATAATAATTGCTTG
GTTTGCCAGACGTTTGCCCGCATGAATGCTACTGCCAAGAAGAAGCGTAT
TATGAAGGGACCGGCCTACCTGTCGACGCACCCGGCTGACGAGGAGCGGA
TCGCCAAACAGAGAGAGTGGATGGACTCGGCGTTGCAGGTATTGTAACAG
CCACAGTACTGTTTGTTCGTATGAAGTCAAATGGACGACGCGATACTTAT
GCATATTAATAGTAAACGTGAGAGTAACAGTGGCAGTGGCAGTGACGTCA
GAACGAGAGTTAGAGTCTGGTCGTCGGCGTCATGGCTCTGACTTGCTGTT
GGAAGCTATTAATGTTAACAAATATTAATCCTGATAACTAAAATGTTCGT
CTTTCCTCGCCCTTGACCTCGCCCGTGCCCTTTCCTTTTCACCGTTTTGT
TTGCTTAATCGGTTTCATCGCCTGCTTTATTGCTAACGACGGATGTCTGA
ATGGTCGTCGGTGGGACGGACGGATCCCGCTGTGCTGCTGTGATCGAATT
GGTCGCGGCTGTTGGTAACCATACTTGAACGGGCAATCTGCCCAACATAC
AACGACAACCCCAGACTCGCGAGCGGTCGGGTTGCTCCGACCTACAACAA
TGGGGGGCGGCGGGTAATCATCGCAATCAACGGTGGTAGATGGTGCAGTT
GTTCTTAAGTGAAGAGAACGCAACCCCAGACTCGCGAGCGGTCGGGTTGC
TCCGACCTACAACAATGGGGGGCGGCGGGTAATCATCGCAATCAACGGTG
GTAG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig97:302101..315654-

>mRNA_A-nodosum_M_contig97.24.5 ID=mRNA_A-nodosum_M_contig97.24.5|Name=mRNA_A-nodosum_M_contig97.24.5|organism=Ascophyllum nodosum dioecious|type=CDS|length=963bp|location=Sequence derived from alignment at A-nodosum_M_contig97:302101..315654- (Ascophyllum nodosum dioecious)
TGGACGGCACGTGTTGCACCATCAAGGGAATTCAGCGCTCGAGGCGCTAC
CGGCGCAGGTCGAGGTCGATCGCCAAAGTCGAGAGGAACGAAAAAACAGG
GCCGAGGATCCCAGGATGCTGGCCGACAGATTGGAGTTGTAGGGGTGGCA
AGCATGGTTGGAGGAACAATGATTTATTTGAGCTGCCAGGATAAGGCGCC
GTACACGAACCGTAGCCGATTCATGATCGTAGACAGAGATGGTGAGTTCT
TGAAACGAATGGGTGCGTCCACGTGGGCGGAGGTGAAGAAGCAATACGGT
CCTCGAATCCTGCCCAAGACCCATCAGGCTTCAAGAACTGTGGAGCGAAT
CGGCAAGCGTATCGCAGATGCAAGTGGGCTGGAGGGCTGCAACTGGGAGT
TCATCGTCGTGAAAGACGACAATATGAATGCGTTTGCGCTCCCAGGAGGC
AAGGTCGTTGTGTTCACCGGACTTTTCGAAGTTACTCCGAACTCGGACGC
GCTAGCCTCGGTCCTTGGGCACGAGGTGGGACACGTTGTGGCAAACCATG
GAGGGGAGAAGGTTAGTAAGGGCTTCCTGAAAGAGGCGCTGCTCCTAATG
CTCGTCGTCGTCACCGGTTACGACTACTTCGATGCGGCAAGATCAATCGG
GAGTTTGGTGTTTGACCTGCCAAATTCGAGAGAGATGGAGCGCGAAGCGG
ATTACATCGGTATGCAGCTCACGGCGAAGGCGTGCTTCGACCCACAAGAG
ATGCCTGAGACGTTTGCCCGCATGAATGCTACTGCCAAGAAGAAGCGTAT
TATGAAGGGACCGGCCTACCTGTCGACGCACCCGGCTGACGAGGAGCGGA
TCGCCAAACAGAGAGAGTGGATGGACTCGGCGTTGCAGACTCGCGAGCGG
TCGGGTTGCTCCGACCTACAACAATGGGGGGCGGCGGGTAATCATCGCAA
TCAACGGTGGTAG
back to top