mRNA_A-nodosum_M_contig960.2.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 675 bits (1742), Expect = 6.790e-228 Identity = 385/677 (56.87%), Postives = 472/677 (69.72%), Query Frame = 1
Query: 1 VLEDSEWLSIMEVEIMVVGDGSTRPPAXXXXX---------------TGDLEPVGLIPLPFIGSNARERERYQAKDNDMSTSWTCD----DSDNWNGDCKLIYDLFWHRHIKEVKIALSNGADAAIDMKIGTEWYSDDPYEMFVTTSGTTTDFETYEFDVFTRRIVIAG-YVTGDESISIAEVEFVEEVQAGEIPVGSFRTPYETGDGSTDNVMTNGFEWWSESDDAIDEELEFELNTWASLTAVGLQFPTGETYLFELHFYTEADGGYNPFTTLTDLESEDTAGWQTFDLQLDADQTVTEVRLVMKGTGSGASGFYLLNARFMGTRAANPTDTYYVGSPRIEEWYGRLYPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDDSPYETTLFLEDGAAGNTAIDAIIVVDGVTDAVISEVYIEGLYDPDTSNDMSAVAGLGSTAVSITNSLNIVCSDAWIGNMDGDAVVVRDSQMVSIDAGRFDDEYLPYRIASSRGIGLLVDGSENVYVRRHAIYDNGEAGIQIIDSTNFTFDATVGYE---ND---EGDGYVGSLDGQQPIEVIVESSTGVIFQDMSVRSANDPVMTVSADSSEVFFNNNGFSRVDAGTCVIQVGDPS-VVTADDDELVLVGSCYVKV 1950
VL+DSEWLSI+E EIM++ DG++ P XXXX TG L+PVGLIPL G + E+ Y KD DMSTSWTC ++D+ DC L +++F HRHIK+VKIAL +GA+ A+DM+I Y E+FVT+SGTT FET+EFD FT + IAG + +G +SISI+EVEFVEE+Q GE+ V F PY+ GDG T+ FEW SESD+A+D L F LN++A + AV LQFP GETY FEL Y D G +T T LES D+ GWQ F+L D VTEV ++MKGTGSGA GF L NARF+GT NP++T+YVGS +E W YPDFV EG DQ+AIMGAIC+VKKASFDGVDCVG D ATG V++ MGE++V+GNIFMKSGV L S DDSPY T + LEDGAAG T AIIV+DG++DA +SEV+I G YD +TSND AV GLGS +SIT S NI C A + + DGDA+VVRDS+MV+IDAG +D+EY P+ I SRG G++VD S++V++RR+ DNG AGI + S NFTF+AT+ E +D EG+G VGSLDGQQPIEVIVESST V FQDM V+S NDPVMTVS SS V F+N GFS V++GTCVIQ S V T DD EL L G+CYVKV
Sbjct: 481 VLDDSEWLSIIEAEIMLLEDGASPTPTTXXXXXXXXXXXXXXXXXSTTGTLQPVGLIPLASTGGTSLEK--YHIKDGDMSTSWTCSGDPQEADDPYYDCILQFNMFSHRHIKQVKIALPDGAERAVDMRIAAP-YDASFGEVFVTSSGTTDGFETFEFDYFTDVVSIAGVFTSGGQSISISEVEFVEEIQDGEVSVVDFDAPYDNGDGLWTGATTDAFEWSSESDEAMDRTLSFVLNSYALMEAVELQFPVGETYKFELTLY---DDGDEIVSTFTGLESVDSEGWQRFELGT-IDDPVTEVTIIMKGTGSGAPGFKLANARFLGTAIDNPSNTFYVGSTYVESWRSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVYLDASFSIDDSPYTTDIILEDGAAGKTDTAAIIVMDGISDARLSEVWIYGHYDSETSNDTPAVDGLGSVGLSITGSTNITCRYASVYSSDGDALVVRDSEMVNIDAGPYDEEYRPWTIGQSRGTGIVVDSSDSVWIRRYTTSDNGIAGIHVSGSNNFTFEATIADECWTDDCVLEGEGNVGSLDGQQPIEVIVESSTLVKFQDMKVQSVNDPVMTVSG-SSGVSFDNCGFSNVESGTCVIQTDATSEVTTGDDPELSLDGTCYVKV 1149
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 652 bits (1681), Expect = 4.120e-221 Identity = 375/679 (55.23%), Postives = 461/679 (67.89%), Query Frame = 1
Query: 1 VLEDSEWLSIMEVEIMVVGDGSTRPPAXXXXX---------------TGDLEPVGLIPLPFIGSNARERERYQAKDNDMSTSWTCD----DSDNWNGDCKLIYDLFWHRHIKEVKIALSNGADAAIDMKIGTEWYSDDPY--EMFVTTSGTTTDFETYEFDVFTRRIVIAGYVTGD-ESISIAEVEFVEEVQAGEIPVGSFRTPYETGDGSTDNVMTNGFEWWSESDDAIDEELEFELNTWASLTAVGLQFPTGETYLFELHFYTEADGGYNPFTTLTDLESEDTAGWQTFDLQLDADQTVTEVRLVMKGTGSGASGFYLLNARFMGTRAANPTDTYYVGSPRIEEWYGRLYPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDDSPYETTLFLEDGAAGNTAIDAIIVVDGVTDAVISEVYIEGLYDPDTSNDMSAVAGLGSTAVSITNSLNIVCSDAWIGNMDGDAVVVRDSQMVSIDAGRFDDEYLPYRIASSRGIGLLVDGSENVYVRRHAIYDNGEAGIQIIDSTNFTFDATVG---YEND---EGDGYVGSLDGQQPIEVIVESSTGVIFQDMSVRSANDPVMTVSADSSEVFFNNNGFSRVDAGTCVIQVGDPS-VVTADDDELVLVGSCYVKV 1950
VL+DSEWLSI+E EIMV+ DG++ P XXX TG L+PVGLIPL G + ER Y KD DMSTSWTC ++ + + DC L + +F HR+IK+VKIAL +GA+ A+DM+I + S+ E+FVT+SGTT FETY+FD FT + IAG T +SISI+EVEFVEE+Q GE+ V F TPY GD T+ F W SESD AIDE+L F L ++A + AV LQFP GETY FEL Y + D +T T ES D+ GWQ F+L D VTE+ +VMKGTGS A GF L NARF GT NP+DT+YVGS + EW YPDFV EG DQ+AIMGAIC+VKKASFDGVDCVG D ATG V++ MGE++V+GNIFMKSGV L S DDSPY T + LEDGAAG T A+IV+D +++A +S +I G YD +TSND V GLGS +SIT S NI C DA + + DGDA+VVRDSQM++ID+G +DD+YLP+ I SRG G++VD S++V+VRR+ YDNG AGI + S NFTF+AT+ + D EG+G VGSLDGQQPIEV+VESST V FQDM V+S NDPV+ VS SS V F+N GFS V+ GTCVIQ S V T DD EL L G+CYVKV
Sbjct: 294 VLDDSEWLSIIEAEIMVLEDGASPMPTTPXXXXXXXXXXXXXXXTSTTGTLQPVGLIPLASTGGTSLER--YHVKDGDMSTSWTCSGNPQETADTSYDCILQFSMFCHRNIKQVKIALPDGAERAVDMRIAAPYSSNSASFEEIFVTSSGTTDGFETYDFDHFTNYVSIAGVFTSSGQSISISEVEFVEEIQDGEVSVVDFETPY-YGDALWPGATTDAFVWASESDAAIDEKLSFVLKSYAVMEAVELQFPIGETYKFELTLYDDED---EIVSTFTGFESVDSEGWQRFELGT-IDDPVTEIAIVMKGTGSEAPGFKLANARFFGTAIDNPSDTFYVGSTYVTEWNSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVHLHAWFSIDDSPYTTDIILEDGAAGKTDTAAMIVMDNISNARLSNTWIIGNYDSETSNDTPTVHGLGSVGLSITGSTNITCIDASVYSSDGDALVVRDSQMINIDSGPYDDDYLPWTIGQSRGTGIVVDSSDSVWVRRYTTYDNGVAGIHVSGSNNFTFEATIADKCWGEDCVLEGEGNVGSLDGQQPIEVVVESSTLVKFQDMKVQSVNDPVIVVSG-SSGVSFDNCGFSNVETGTCVIQTDTTSEVTTGDDPELSLDGTCYVKV 964
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 645 bits (1663), Expect = 5.370e-216 Identity = 363/670 (54.18%), Postives = 459/670 (68.51%), Query Frame = 1
Query: 1 VLEDSEWLSIMEVEIMVVGD--------GSTRPPAXXXXXTGDLEPVGLIPLP-FIGSNARERERYQAKDNDMSTSWTCDDSDNWNGDCKLIYDLFWHRHIKEVKIALSNGADAAIDMKIGTEWYSDDPY----EMFVTTSGTTTDFETYEFDVFTRRIVIAG-YVTGDESISIAEVEFVEEVQAGEIPVGSFRTPYETGDGSTDNVMTNGFEWWSESDDAIDEELEFELNTWASLTAVGLQFPTGETYLFELHFYTEADGGYNPFTTLTDLESEDTAGWQTFDLQ--LDADQTVTEVRLVMKGTGSGASGFYLLNARFMGTRAANPTDTYYVGSPRIEEWYGRL--YPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDDSPYETTLFLEDGAAGNTAIDAIIVVDGVTDAVISEVYIEGLYDPDTSNDMSAVAGLGSTAVSITNSLNIVCSDAWIGNMDGDAVVVRDSQMVSIDAGRFDDEYLPYRIASSRGIGLLVDGSENVYVRRHAIYDNGEAGIQIIDSTNFTFDATVGYENDEGDGYVGSLDGQQPIEVIVESSTGVIFQDMSVRSANDPVMTVSADSSEVFFNNNGFSRVDAGTCVIQVGDPSVVT--ADDDELVLVGSCYVKV 1950
VL DSEWLSI+E I V D GST PA G+L VGL+PL G + + +KD D STSWTC +C L +DLF RHIK+VKIAL +GA+ A+DM+I Y D+ E +VT+SGTT +FETY+FDVFT I+I+G + + ++ISI+EVEF+EE+QAGEI + + TP D D T+ F+W ++SDDAI +EFEL +A + AV ++FP G+TY F+L + G T+T ES DTA WQ+FDL LDADQ +TE+ +V++GTGSGA GF +L+ R MGT NPTDT YVGS IE W G YPDFV EG DQ+ IM AIC+VKKASFDGVDCVG D ATGTV L G +YV+GNIFMKSGV L G S+D SPY T + LE+GAAG T IDA++V+DG+++A+ ++I G YDPDTSND AV GLGST +S+ S NI DA I +DGDA+VVRDS M+SIDAG +++ Y P+ +ASSRG GL+VD +++YVRRH +Y+NG AGI I+ + NFTFDAT+G E+ G+G VG+LDGQQPI+VI+ESST V F D+ V+S+NDP+M VS DSS V FNN G S V+A CVIQ DPS VT AD+DEL L GSCYVKV
Sbjct: 496 VLGDSEWLSIIETLIYVWPDTAPTPSTTGSTPAPAPITP-VGELTAVGLLPLADCTGCFGEDLPPFHSKDGDFSTSWTC----VGGTECTLRFDLFSWRHIKQVKIALPDGAERAVDMRIAGR-YDDELAAAFAEAYVTSSGTTDEFETYDFDVFTNEILISGVFTSASQTISISEVEFMEELQAGEIQISEWNTPL--ADARVDGPTTDAFDWTTDSDDAIGRTVEFELAWYAMVDAVEIKFPVGDTYKFDLELNDDQIRG-EILKTITGFESADTADWQSFDLSQHLDADQFLTEINIVVQGTGSGAPGFAMLDIRVMGTAIDNPTDTVYVGSTFIERWTGLTDRYPDFVAEGTGDQKIIMEAICTVKKASFDGVDCVGGDDAATGTVVLPQGSWYVDGNIFMKSGVFLDGSFSED-SPYFTGIILEEGAAGKTDIDAMVVMDGISNAMTDNIWIRGHYDPDTSNDTPAVPGLGSTGLSVVGSTNITLRDAEIRFLDGDALVVRDSNMISIDAGEYEELYSPWSLASSRGTGLIVDSCDSIYVRRHTLYENGVAGIHIVGTNNFTFDATIGEESTVGEGNVGNLDGQQPIDVIIESSTLVTFNDLRVQSSNDPIMMVS-DSSTVSFNNLGLSLVEADACVIQADDPSTVTIDADEDELTLDGSCYVKV 1154
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 610 bits (1573), Expect = 1.900e-202 Identity = 345/679 (50.81%), Postives = 446/679 (65.68%), Query Frame = 1
Query: 1 VLEDSEWLSIMEVEIMV---------VGDGSTRPPAXXXXX---------TGDLEPVGLIPLPFIGSNARERERYQAKDNDMSTSWTCDDSDNWNGD-------CKLIYDLFWHRHIKEVKIALSNGADAAIDMKIGTEWYSDDPYEMFVTTSGTTTDFETYEFDVFTRRIVIAG-YVTGDESISIAEVEFVEEVQAGEIPVGSFRTPYETGDGSTDNVMTNGFEWWSESDDAIDEELEFELNTWASLTAVGLQFPTGETYLFELHFYTEADGGYNPFTTLTDLESEDTAGWQTFDLQLDADQTVTEVRLVMKGTGSGASGFYLLNARFMGTRAANPTDTYYVGSPRIEEWYGRLYPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDDSPYETTLFLEDGAAGNTAIDAIIVVDGVTDAVISEVYIEGLYDPDTSNDMSAVAGLGSTAVSITNSLNIVCSDAWIGNMDGDAVVVRDSQMVSIDAGRFDDEYLPYRIASSRGIGLLVDGSENVYVRRHAIYDNGEAGIQIIDSTNFTFDATVGYEN-DEGDGYVGSLDGQQPIEVIVESSTGVIFQDMSVRSANDPVMTVSADSSEVFFNNNGFSRVDAGTCVIQVGDPSVVT--ADDDELVLVGSCYVKV 1950
VL+DSEWLSI+E EIMV +T PPA DL+PVGL PL IG N +RY KD D +TSWTC D C+L + L ++RH+K+VK+AL++GA+ ++DM++ +S E FVT+SGTT FETY+FD I IA + + ESISI+EVE +EEV GE P+ F TPY+ GDG + T+GFEW S S++AID+ L L + ++T + L FP G+TY F++ + DG +TT+T LES A+Q VT + + MKGTGSGA GF +L+A +GT+ NP+DT++VGS IE W G YPDFVG G DQ AI GAIC VKK ++DGV+CV D TATGTV LS G YYVNGNIFM+SGVLL+G S DD P+ T + LE+GA GNT IDAI+V+DG+ DA I +V+I+G YDP+T +SAV+GLGS +S+ NS NI C I GDA+VVRDS +V+IDAGR+D+EYLP+ I S G GL+VD S++++VRR Y+N AG+ I+ S NFTF+AT+ E EG+G VGS+DGQQPIEVIV +S+ V FQDM V+S NDPVMT++ DS+ V F N G+S V +GTC IQ DPS VT AD+DELVL G+CYVKV
Sbjct: 490 VLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPLPAADLQPVGLTPL-AIG-NESPLDRYATKDGDFTTSWTCTGDPTEPNDEGITYYQCELFFGLVYYRHVKQVKVALADGAERSVDMRLAGR-FSSSIAEEFVTSSGTTNGFETYDFDYKASYIRIAAVFSSPGESISISEVEIMEEVVEGEAPIDIFSTPYDNGDGLWNEPTTDGFEWSSNSNEAIDQSLTLSLAGYHTVTELQLMFPEGDTYKFDVTLFNNLDGTGEAYTTITGLESXXXXXXXXXXXXXXANQYVTSIGIEMKGTGSGAPGFAMLDALVLGTKIDNPSDTFHVGSTFIEYWGGDGYPDFVGSGSGDQNAINGAICGVKKGTYDGVNCVDVDDTATGTVDLSWGAYYVNGNIFMQSGVLLLG-SFGDDDPHTTDIVLEEGAEGNTDIDAIVVMDGIRDAWIEKVWIQGNYDPETDG-ISAVSGLGSACLSVVNSQNITCEGVDIRYCSGDALVVRDSTLVNIDAGRYDEEYLPWTIGLSGGTGLIVDTSDSIWVRRTTFYENAVAGLHIMGSNNFTFEATIASEEGSEGEGNVGSVDGQQPIEVIVGTSSLVTFQDMKVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQTDDPSTVTIDADEDELVLEGTCYVKV 1162
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 1.510e-153 Identity = 304/677 (44.90%), Postives = 392/677 (57.90%), Query Frame = 1
Query: 1 VLEDSEWLSIMEVEIMVVGDGSTRPP-----------------AXXXXXTGDLEPVGLIPLPFIGSNARERERYQAKDNDMSTSWTCDDSDNWNG-------DCKLIYDLFWHRHIKEVKIALSNGADAAIDMKIGTEWYSDDPYEMFVTTSGTTTDFETYEFDVFTRRIVIAG-YVTGDESISIAEVEFVEEVQAGEIPVGSFRTPYETGDGSTDNVMTNGFEWWSESDDAIDEELEFELNTWASLTAVGLQFPTGETYLFELHFYTEADGGYNPFTTLTDLESEDTAGWQTFDLQLDADQTVTEVRLVMKGTGSGASGFYLLNARFMGTRAANPTDTYYVGSPRIEEWYGRLYPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDDSPYETTLFLEDGAAGNTAIDAIIVVDGVTDAVISEVYIEGLYDPDTSNDMSAVAGLGSTAVSITNSLNIVCSDAWIGNMDGDAVVVRDSQMVSIDAGRFDDEYLPYRIASSRGIGLLVDGSENVYVRRHAIYDNGEAGIQIIDSTNFTFDATVGYENDEGDGYVGSLDGQQPIEVIVESSTGVIFQDMSVRSANDPVMTVSADSSEVFFNNNGFSRVDAGTCVIQVGDPSVVTAD--DDELVLVGSCYVKV 1950
VL+DSEWLSI+E EIMV PP + GDL+PVGLIPL + +R AKD D+STSWTC +C L++DL + RHIK+VKIAL++GA+ A+DM I + Y P E+ VT+SGTT ETY+ D T + I+G + + +SISI+EVEFVEEV GE+ + T+ F+ +++ N FEL + G P+ TLT LE TA +Q+ DL A Q VT + + ++G SG S F L++AR +GT+ NPTDT+YVGS I EWYG PDFVG+G DQ AI AIC+VKK ++DGVDCVG D +ATGTV L+ GEY+V+GNIFMKSGV L G DDSPY +FLE+GA GNT +DA+IV+DG++DA I +++I GLYDPDTSND AV GLGST VSI +S NI C+D W+ DGDA+VVR S +V+IDAG + DEY + G + + + IY VG + G VGSL+GQQPIEVIVE S+ + FQ+M VRS NDPVMT+S DS+ V F N+G V +GTC+IQ DPS VT D +DEL+L G+CYVKV
Sbjct: 371 VLDDSEWLSIIETEIMVWPQNVVTPPPTPATTAXXXXXQPATTSPIPTPVGDLQPVGLIPL--ATGDGSLLDRCAAKDGDLSTSWTCTGDPREVSPQGILYYECSLLFDLVYTRHIKQVKIALADGAERAVDMSI-SRGYGTTPEEL-VTSSGTTDGLETYDVDYRTSSVRISGDFSSPGQSISISEVEFVEEVVDGEVL-----------------LETSYFD-------------DYDWN-------------------FELSLFNRIGGTDEPYATLTGLEITGTAEYQSIDLTGFAGQYVTSIAVHVEG--SGGSEFPLIDARILGTKIDNPTDTFYVGSTFIPEWYGHGDPDFVGQGTGDQNAINAAICAVKKGTYDGVDCVGMDDSATGTVVLAFGEYHVDGNIFMKSGVFLKGRYRFDDSPYNIDIFLEEGAPGNTDVDAMIVMDGISDARIGDLWIHGLYDPDTSNDSPAVPGLGSTGVSIVDSQNITCADTWVDFCDGDAMVVRSSSVVNIDAGYY-DEY------KATGWRVCTSWTPTTLPSKPPIY--------------------VGSQ-----GQVGSLEGQQPIEVIVEGSSLINFQEMWVRSVNDPVMTIS-DSTAVSFTNDGSYSVASGTCIIQTDDPSTVTIDPDEDELILEGTCYVKV 959
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI) HSP 1 Score: 255 bits (651), Expect = 1.400e-73 Identity = 214/572 (37.41%), Postives = 282/572 (49.30%), Query Frame = 1
Query: 325 MKIG---TEWYSDDPYEMFVTTSGTTTDFETYEFDVFTRRIVIAG-YVTGDESISIAEVEFVEEVQAGEIPVGSFRTPYETGDGSTDNVMTNGFEWWSESDDAIDEELEFELNTWASLTAVGLQFPTGETYLFELHFYTEADGGYNPFTTLTDLESEDTAGWQTFDLQLDADQTVTEVRLVMKGTGSGASGFYLLNARFMGTRAANPTDTYYVGSPRIEEWYGRLYPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDD---SPYETTLFLEDGAAGNTAIDAIIVVDG--VTDAVISEVYIEGLYDPDTSNDMSAVAGLGSTAV--------SITNSL-NIVCSDAWIGNMDGDAVVVRDSQMVSIDAGRFDD-------EYLPY--RIASSRGIGLLVDGSENVYVRRHAIYDNGEAGI-QIIDSTNFTFDATVGYENDEGDGYVGSLDGQQPIEVIVESSTGVIFQDMSVRSANDPVMTVSADSSEVFFNNNGFSRVDAGTCVIQVGDPSVVT--ADDDELVLVGSCYVKV 1950
M++G T W + E FV +SGTT FETY+FD + IA + + E ISI+E T+GFEW S+S++AI L L + ++ E H D AG+Q+FDL ADQ VT + + MKGTGSGA GF +L+ +G + NP+DT+YVGS IE W G PDFVG G DQ AI GAIC+VKK +FDGVDC+ D TATGTV LS +V + S L SS + P E + I + G + D V++ + + + S + ++ V S+ N+L N+ C I GDA+VVRDS +VSIDAGR+D+ +Y P + SR +GL + S +V R + G+ Q +N EG G VGS+DGQQPIEVIVESS+ V FQD V+S NDPVMT++ DS+ V F N G+S V +GTC IQ DPS VT AD+DELVL G+CYVKV
Sbjct: 1 MRLGGRFTSWIA----EEFVMSSGTTDGFETYDFDYKASSVRIAAVFSSPGEFISISE-----------------------------EPTTDGFEWSSDSNEAISRTLFLSLAGY---------------FMAERHGRGVHDHH---------------AGFQSFDLTGFADQYVTSIGIEMKGTGSGAPGFAVLDPMVLGAKIDNPSDTFYVGSTFIEFWSGNGLPDFVGTGSGDQNAINGAICAVKKGTFDGVDCIDMDETATGTVDLS----WVRTSWTATSSCSLAFSSSANRRRVDPRELSSRDRHRQQSRRIWPRIDLPLGCELPDFVVARLTLMEMPVTAFSASLHSLPKASLCLVPSVPPLHRSMPNTLQNVTCEGVDIRYCSGDALVVRDSTLVSIDAGRYDEHEGVPSVDYRPKPRHRSDSRHVGLRL--SSPAHVTRQRRGGSPHHGLEQFYLRSNHR-------RGPEGAGNVGSVDGQQPIEVIVESSSLVKFQDKPVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQADDPSTVTIDADEDELVLEGTCYVKV 495
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: D7FSQ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI) HSP 1 Score: 156 bits (394), Expect = 5.980e-36 Identity = 184/699 (26.32%), Postives = 311/699 (44.49%), Query Frame = 1
Query: 28 IMEVEIMVVGDGSTRPPAXXXXXTGDLEPVGLIPLPF-IGS----NARERER----------------YQAKDNDMS--TSWTCD-----DSDNWNGDCKLIYDLFWHRHIKEVKIALSNGADAAIDMKIGTEWYSDDPYEMFVTT---SGTTTDFETYEFDVFTRRI-VIAGYVTGDESISIAEVEFVEEVQAGEI----PVGSFRTPYETGDGSTDNVMTNGFEWWSESDDAIDEELEFELNTW----------ASLTAVGLQFPTGETYLFELHFYTEADGGYNPFTTLTDLESEDTAGWQTFDLQLDADQTVTEVRLVMKGTGSGASGFY----LLNARFMGTRAANPTDTYYVGSPRIEEWYGRLYPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDDSPYETTLFLEDGAAGNTAI-DAIIVVDGVTDAVISEVYIEGLYDPDTSNDMSAVAGLGSTAVSITNSLNIVCSDAWIGNMDGDAVVVRDSQMVSIDAGRFDDEYLPYRIASSRGIGLLVDGSENVYVRRHAIYDNGEAGIQIIDSTNFTFD--ATVGYENDEGDGYVGSLDGQQPIEVIVE-SSTGVIFQDMSVRSANDPVMTVSADSSEVFFNNN-GFSRVDAGTCVIQV----GDPSVVTADDDELVLV-GSCYV 1944
I EVE+ V GD RP + L+P G++PL GS N RE Y KD DMS + WTC + + N DC L+ L + R++++++ A +G E Y++ E V++ SG +TD++T++ +V T I ++ + D+ I I E+ +E + G I PV + + GDG D+ +SD+ + EF + +++TAV L+FP+ ++F + Y E + T DT +TF L AD + G + Y +++ + +G +P + V + + W R+ PD +G+G SDQE IM IC K +FDG DCVGE ++ +++ G Y+++G +F+KSGV L G + P T L L + +T + DA+IV+DGVT + VYIE + + D++ LG+ + + S ++ ++ A DS+ +S+ R D EY G + VDG ++ + AG++I DS N A+ YE ++ G Q V++ +S+G++FQD S+ + D + + + +N G+ ++G C+I V GD +V + ++ G C+V
Sbjct: 324 INEVELRV-GDAPVRPVSEKAW----LQPTGMLPLAADTGSSGHPNFDNREPSAGGCDSPAHFEGCHVYYIKDGDMSDDSRWTCGPLAAGNLVSNNEDCHLMLSLNYFRYVRQIQFAFH----------MGDEQYNEFSIETVVSSAISSGDSTDYQTFDIEVHTNEIRLVPVFQRVDQWIGIKEMVILETKEMGFINGTLPVFDYSYWFPRGDGGDDDSS-------GDSDEDVPTRFEFHMPRPEDYFQFRVPPSTVTAVKLRFPSDRQFVFRVS-YDEIETDEEIVEEFTSAGGPDTM--ETFTLSAPADVERFVYITAVSGPTFESQPDYPTLRVIDFQIVGEIKKDPGH-FEVVTTTMTVW--RVVPDIIGDGVSDQEEIMTTICETKGGAFDGTDCVGELDDSSVHISMKNGHYFLDGPVFLKSGVTLSGGDYSYNEPSRTYLVLHN----HTRLEDAVIVIDGVTGGEVDSVYIE--HQTPMTGDITP-GTLGNLCLEVRGSQDLKLAEIDCHQARTGAARFVDSKNISVSVIR-DGEY-------ETGNFMEVDGVDDFHFEGIPEV----AGLRIEDSNNVVLQGGASNVYEVPTPV-FLPPTGGDQAASVVITGASSGIVFQDCSIYAGGDTAPVLMESTEPLTLDNILGYEAAESGDCIIDVPPESGDDLIVQLNSYAILSKDGDCWV 974
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: A0A6H5JDS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE) HSP 1 Score: 132 bits (333), Expect = 2.290e-28 Identity = 168/646 (26.01%), Postives = 288/646 (44.58%), Query Frame = 1
Query: 127 PLPFIGSNARERERYQAKDNDMSTSWTC------DDSDNWNGDCKLIYDLFWHRHIKEVKIALSNGADAAIDMKIGT-----EWYSDDPYEMFVTTSGTTTDFETYEFDVFTRRIVIA---GYVTGDESISIAEVEFVEEVQA----GEIPVGSFR-----TPYETGDGSTDNVMTNGFEWWSESDDAIDEELEFELNTWAS-LTAVGLQFPTGETYLFELHFYTEADGGYNPFTTLTDLESEDTAGWQTFDLQLDADQTV-TEVRLVMKGTGSGASGFYLLNARFMGTRAANPTDTYYVG--SPRIEEWYGRLYPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDDSPYETTLFLEDGAAGN-TAIDAIIVVDGVTDAVISEVYIEGLYDPDTSNDMSAVAG-LGSTAVSITNSLNIVCSDAWIGNMDGDAVVVRDSQMVS---------------IDAGRFDDEYLPYRIASSRGIGLLVDGSENVYVRRHAIYDNGEAGIQIIDSTNFTFDATVGYENDEGDGYVGSLDGQQPIEVIVES-STGVIFQDMSVRSANDPVMTVSADSSEVFFNNNGFSRVDAGTCVIQVGDPSVVTADDDELVLV 1929
P+ F G + + KD +M + WTC D ++W DC L + L + R+I++++IA G + I EW + P + +S +D++T++ V T I + G +T + I I E+ F+E+ + G IPV S R E DG+ ++ T FE+ D E ++N S +TA+ ++FP +++F + + DG FT+ ++ W+TF L A+ EV V T + L + + Y+ + IE W + PD +GEG S+Q+ +M AIC K ++FDG+DCVGE + T+ L G+YY++G IF+KSGV + GD +D+ P L L DG + T DA++VVDG T A + + DP + D+ V G +G+T +++ NS +I S+ + + DS+ +S ++ R DD + +R + G+L+D ++ G+ + F V G Q V+V S+G++FQ+ V + +P + V + N ++ + G C+++V + + D+D +V V
Sbjct: 383 PIHFEGCHV-----FYIKDENMDSRWTCGPLVAGSDRNSW--DCDLEFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAI---SSEDGSDYQTFDVAVHTNMIRLLPKFGQIT--DFIGIKELVFLEKRKKDFIEGTIPVFSTRIRSTSNDDEEEDGADVDIPTR-FEF-----DLQIEGNYIDMNVPPSTVTALRMRFPADRSFVFMVEY----DGIVEEFTSAGGPKT-----WETFTLSTPAEVDFGLEVVAVTGPTFDHIPDYPALRVVDLQVVGELRKEPGYIDVVTTTIETW--GVVPDVIGEGVSEQKTVMKAICEAKGSTFDGIDCVGELDDSEVTIKLQFGDYYIDGPIFLKSGVFIDGDW-KDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDP--TGDI--VPGTVGNTNLAVRNSQDIRFSEMGLFSGRNGGATFTDSRNMSAFIFYNGDGLETGNYMELTRVDDVH--FRALPNMS-GVLIDTCNDIVFE----------GVDEFAIPSAYFSPPV-------------AGGDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGT----DEDFVVQV 964
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Match: D8LG22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG22_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 5.270e-18 Identity = 89/329 (27.05%), Postives = 152/329 (46.20%), Query Frame = 1
Query: 949 VGSPRIEEWYGRLYPDFVGEGRSDQEAIMGAICSVKKASFDGVDCVGEDPTATGTVTLSMGEYYVNGNIFMKSGVLLIGDSSQDDSPYETTLFLEDGAAGN-TAIDAIIVVDGVTDAVISEVYIEGLYDPDTSNDMSAVAGLGSTAVSITNSLNIVCSDAWIGNMDGDAVVVRDSQMVSIDAGRFDDEYLPYRIASSRGIGLLVDGSENVYVRRHAIYDNGEAGIQIIDSTNFTFDATVGYENDEGDGYVGSLDGQQPIEVIVES-STGVIFQDMSVRSANDPVMTVSADSSEVFFNNNGFSRVDAGTCVIQVGDPSVVTADDDELVLV 1929
V + IE W + PD +GEG S+Q+ +M AIC K ++FDGVDCVGE + T+ L G+YY++G IF+KSGV + G+ QD+ P L L +G + T DA++VVDG T A E+Y + +G+T +++ NS +I S+ + + DS+ +S DE G + + ++V+ R +G+ + F+ + Q V+V S+G++FQ+ V + +P + V + N ++ + G C+++V + + D+D +V V
Sbjct: 157 VVTTTIETW--GVVPDVIGEGVSEQKNVMKAICEAKGSTFDGVDCVGELNDSEVTIKLHFGDYYIDGPIFLKSGVFIDGEW-QDEYPTFCWLVLYEGDSNTVTGEDAMVVVDGATGA---ELYGLAFVRKEEPTGDIVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNGGATFTDSRNMSAFIFYNGDEL-------ETGNYMELTRVDDVHFRALP----NMSGVLFDTCNDIVFEGVDDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNFVVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGT----DEDFVVQV 464 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig960.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig960.2.1 >prot_A-nodosum_M_contig960.2.1 ID=prot_A-nodosum_M_contig960.2.1|Name=mRNA_A-nodosum_M_contig960.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=641bp MEVEIMVVGDGSTRPPAPAPTPTGDLEPVGLIPLPFIGSNARERERYQAKback to top mRNA from alignment at A-nodosum_M_contig960:37424..43439+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig960.2.1 ID=mRNA_A-nodosum_M_contig960.2.1|Name=mRNA_A-nodosum_M_contig960.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6016bp|location=Sequence derived from alignment at A-nodosum_M_contig960:37424..43439+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig960:37424..43439+ >mRNA_A-nodosum_M_contig960.2.1 ID=mRNA_A-nodosum_M_contig960.2.1|Name=mRNA_A-nodosum_M_contig960.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1923bp|location=Sequence derived from alignment at A-nodosum_M_contig960:37424..43439+ (Ascophyllum nodosum dioecious)back to top |