mRNA_A-nodosum_M_contig947.28.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig947.28.1
Unique NamemRNA_A-nodosum_M_contig947.28.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: A0A6H5KYG4_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYG4_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 9.170e-149
Identity = 202/230 (87.83%), Postives = 217/230 (94.35%), Query Frame = 1
Query:    1 STPHQSRGKMTAENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVEGRKKA 690
            ST   + G ++AE+VLK+PKWP+KWPFYEDDF+RMDESSDGDFYSQPRLVYHIDD+AV ALTKYY+KALPKGADVLDICSSWVSHFPK WEHGKRTGLGMN++ELSKN QL+EY VKDLNVD KFP+ DNSFDVVTCVVSVDYLNKPLEVF EIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGF+PP +HDISPNPGRSDPMYIVEGRKKA
Sbjct:   48 STALFASGGVSAEDVLKAPKWPEKWPFYEDDFSRMDESSDGDFYSQPRLVYHIDDSAVKALTKYYTKALPKGADVLDICSSWVSHFPKDWEHGKRTGLGMNEFELSKNVQLDEYRVKDLNVDAKFPFDDNSFDVVTCVVSVDYLNKPLEVFNEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFDPPVSHDISPNPGRSDPMYIVEGRKKA 277          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: A0A6V1S5I5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S5I5_HETAK)

HSP 1 Score: 356 bits (914), Expect = 1.400e-119
Identity = 161/222 (72.52%), Postives = 189/222 (85.14%), Query Frame = 1
Query:   22 GKMTAENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVEGRKK 687
            G + AE++LK+PKWP +WPF +DDF RMDE  D  FY   RLVYHIDD AV ALT++Y +  P+GADVLDICSSWVSHFP+GW+HG+R+G GMN+YELSKN QL++Y V+DLNV P+ PY D SFD+VTCVVSVDYLN+PL +F E+RRVLRPGG+A+MSMSNRCFPTKAI IW QTND+EH+FIVGSYFHYAGGF  PEA DISPNPGRSDPMYIV+  KK
Sbjct:   44 GGIKAEDILKAPKWPAEWPFTKDDFKRMDEEEDTVFYQDARLVYHIDDPAVGALTRFYKETFPEGADVLDICSSWVSHFPEGWKHGRRSGTGMNEYELSKNPQLDDYFVRDLNVRPELPYEDESFDLVTCVVSVDYLNQPLAIFDEVRRVLRPGGRAVMSMSNRCFPTKAINIWLQTNDLEHLFIVGSYFHYAGGFNAPEALDISPNPGRSDPMYIVQATKK 265          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: A0A835Z0P5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0P5_9STRA)

HSP 1 Score: 328 bits (840), Expect = 2.290e-108
Identity = 150/216 (69.44%), Postives = 181/216 (83.80%), Query Frame = 1
Query:   28 MTAENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVE 675
            +  E+VLK+PKWP+++PF   DF R DES D +FY  PRLV HIDDAAV ALT+YYSK LP+GADVLDICSSWVSHFP+ W+HGKR GLGMN+YELS+N+QL+EY V+DLNV+P FP+ D+SFDV+TCVVS+DYL    +VF E  RVLRP GK I+SMSNRCFPTKA ++W  TND EH+FIVG++FHY+G F+P +AHDISPNP RSDPMYIVE
Sbjct:   49 LGIEDVLKNPKWPEQYPFKPADFKRQDESVDTEFYEYPRLVLHIDDAAVKALTEYYSKTLPEGADVLDICSSWVSHFPQNWKHGKRVGLGMNEYELSQNKQLDEYVVRDLNVNPAFPFPDSSFDVITCVVSIDYLVTLDKVFAEAARVLRPNGKFIISMSNRCFPTKAWKLWLSTNDFEHVFIVGAFFHYSGAFQPAQAHDISPNPSRSDPMYIVE 264          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: B8C942_THAPS (Methyltransf_11 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C942_THAPS)

HSP 1 Score: 326 bits (835), Expect = 2.770e-108
Identity = 152/222 (68.47%), Postives = 179/222 (80.63%), Query Frame = 1
Query:   25 KMTAENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVEGRKKA 690
            K  AE VL +PK+P +WP+   DF R DES DG FY QPRLVYHIDD+AV+ALT+YY+ A  +G DVLDICSSWVSHFPK W+ G   GLGMN+YELS+NEQL  + VKDLN DP FP+GD  FD VTCVVSVDYLN+P ++FKEI RVLRPGG+ I+SMSNRCFPTKA +IW QTND+EHIFIVGS+FHYAG F+     DISPNPGRSDP++IV+  KK+
Sbjct:    2 KELAEKVLTNPKFPPQWPYSPSDFQRSDESDDGIFYDQPRLVYHIDDSAVSALTQYYTDAFNEGEDVLDICSSWVSHFPKEWKGGNVVGLGMNEYELSQNEQLSSFVVKDLNKDPTFPFGDEEFDKVTCVVSVDYLNQPEKIFKEIARVLRPGGECIISMSNRCFPTKAFRIWLQTNDLEHIFIVGSFFHYAGQFDAATCEDISPNPGRSDPLFIVKAAKKS 223          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: A0A1E7ELA4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ELA4_9STRA)

HSP 1 Score: 317 bits (812), Expect = 9.730e-105
Identity = 150/219 (68.49%), Postives = 182/219 (83.11%), Query Frame = 1
Query:   34 AENVLKSPKWPDKWPFYED-DFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVEGRKK 687
            AE VL++PK+PD+WP+ +D DF+R DES D  FY  PRL YHIDD AV+ALTKYYS+ L +G DVLDICSSWVSH+PK ++ GK  GLGMN+YELS+N QL ++ VKDLN DP FP+ D+SFD VTCVVSVDYLNKPL+VFKEI RVLRPGG+ ++SMSNRCFPTKA +IW QT+D+EHIFI GS+FHY+  F+ P   DISPNPGRSDP+YIV+G +K
Sbjct:    9 AEKVLENPKFPDEWPYSDDTDFSRQDESKDTIFYDTPRLCYHIDDDAVSALTKYYSENLKEGDDVLDICSSWVSHYPKDFKGGKVVGLGMNEYELSQNPQLTDFVVKDLNADPVFPFEDSSFDKVTCVVSVDYLNKPLQVFKEIGRVLRPGGECLISMSNRCFPTKAFKIWLQTSDLEHIFITGSFFHYSDLFDVPSCSDISPNPGRSDPLYIVKGVRK 227          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: B5Y3G7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3G7_PHATC)

HSP 1 Score: 317 bits (812), Expect = 1.010e-104
Identity = 146/218 (66.97%), Postives = 173/218 (79.36%), Query Frame = 1
Query:   34 AENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVEGRKK 687
             E VL++PKWP +WP+  +DF R DES D  FY  PRLVYHIDDAAV ALT+YY++    G DVLDICSSWV H+P  W+ GK  GLGMN+YELS+N  L+ Y VKDLN +P  P+ DNSFD VTCVVSVDYLNKPLEVF+EI RVLRPGG+ I+SMSNRCFPTKA +IW QT+D+EH+FI GS+FHYA  F+PP   DISPNPGRSDP++IV+  KK
Sbjct:   11 TEKVLQNPKWPPEWPYSAEDFARQDESDDELFYESPRLVYHIDDAAVGALTQYYAEEFKDGDDVLDICSSWVCHYPNQWKGGKVVGLGMNEYELSQNPVLDSYVVKDLNKEPTIPFDDNSFDKVTCVVSVDYLNKPLEVFQEIGRVLRPGGECILSMSNRCFPTKAFRIWLQTSDLEHVFIAGSFFHYAEKFDPPSGKDISPNPGRSDPLFIVKAAKK 228          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: L1JA50_GUITC (Methyltransf_11 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JA50_GUITC)

HSP 1 Score: 317 bits (812), Expect = 1.040e-104
Identity = 149/227 (65.64%), Postives = 181/227 (79.74%), Query Frame = 1
Query:   25 KMTAENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEH--GKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPG----RSDPMYIVEGRKK 687
            +++ E+VLK+PKWP  WP+   DF+R DES D  FY  PRLVYHIDD A+ ALT YY+K +P+ +D+LDICSSWVSHFPK +    GKR GLGMNQ+ELSKNEQL E+ V++LN +PKFP+ DNSFDVVTCVVSVDYL KPLE+F+E+ RVLRPGG+ I+S SNRCFP+KAI+IW  TND+EHIFI+GSYFHYAGGF P +A DISP        SDPMYI++  KK
Sbjct:    2 RVSVEDVLKNPKWPQSWPYSSKDFSRTDESEDEYFYDTPRLVYHIDDKAIAALTDYYAKTIPEKSDILDICSSWVSHFPKDFPQKMGKRVGLGMNQFELSKNEQLSEFVVQNLNKNPKFPFPDNSFDVVTCVVSVDYLIKPLEIFQEVSRVLRPGGRFIISQSNRCFPSKAIRIWLDTNDLEHIFIIGSYFHYAGGFNPAQAFDISPKKSIFSPPSDPMYIIQAEKK 228          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: A0A7S1B511_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B511_9STRA)

HSP 1 Score: 316 bits (809), Expect = 2.090e-103
Identity = 140/223 (62.78%), Postives = 175/223 (78.48%), Query Frame = 1
Query:   19 RGKMTAENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVEGRKK 687
            RG+  AE VL++P+WP++WPF E+DF R DESSD  FY  PRL +HID+ AV A+TKYYS+   +G DVLDICSSWVSH+PK W  G   GLGMN+YEL +N  L  Y+V+DLN +P FPY DNSFDVVTCVVS+DYL  P ++F EI RV+RPGGKAI+S+ NRCFPTK  Q+W QTND+EHIF++GS+FHY+G FEPP+  D+SPNPG SDP+Y++    K
Sbjct:   65 RGESIAEKVLENPQWPEEWPFTEEDFRRQDESSDDIFYDSPRLCFHIDEPAVEAVTKYYSEVFEQGQDVLDICSSWVSHYPKDWSGGNVVGLGMNEYELRENPVLTSYDVRDLNKNPNFPYDDNSFDVVTCVVSIDYLIDPRKIFAEIGRVIRPGGKAIISIGNRCFPTKVFQLWLQTNDLEHIFVIGSFFHYSGLFEPPKCIDMSPNPGLSDPLYVITATAK 287          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: A0A7S0BE51_9RHOD (Hypothetical protein n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BE51_9RHOD)

HSP 1 Score: 314 bits (804), Expect = 4.600e-103
Identity = 150/224 (66.96%), Postives = 177/224 (79.02%), Query Frame = 1
Query:   16 SRGKMTAENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVEGRKK 687
            +R   +  ++LK PK+P +WPF   DF R DE +D  FY QPRLVYH+DDAAVNALTK+Y+K++P+ AD+LDICSSWVSH P  ++ G+  GLGMN  EL  N++L E+ VKDLN DP  P+ D SFDVVT VVSVDYLNKPLEVFKEI RVLRPGGKAIMS SNRCFP+KAI IW  TND EHIFIVG YF+YAGGFE  E+ D+SPNPGRSDPMY+V+  KK
Sbjct:   34 TRMAYSVADILKDPKFPAEWPFSSMDFKRQDEMTDSMFYYQPRLVYHVDDAAVNALTKFYAKSIPENADLLDICSSWVSHLPDSFKGGRVAGLGMNADELKANKRLTEFTVKDLNKDPVLPFDDASFDVVTNVVSVDYLNKPLEVFKEINRVLRPGGKAIMSFSNRCFPSKAINIWLSTNDFEHIFIVGCYFNYAGGFEKLESIDLSPNPGRSDPMYVVQAYKK 257          
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Match: A0A7S2SKG7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SKG7_9STRA)

HSP 1 Score: 312 bits (799), Expect = 6.140e-102
Identity = 143/216 (66.20%), Postives = 171/216 (79.17%), Query Frame = 1
Query:   37 ENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVNALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNEQLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAHDISPNPGRSDPMYIVEGRK 684
            E VL++PKWP  WP+ ++DF+RMDES D  FY  PRLVYHIDD AV ALT+YY + +  G DVLDICSSWVSH+PK ++ G   GLGMN+YELS+N+QL  + VKDLN DP FP+ D+SFD VTCVVSVDYLNKP E+F EI RVLRPGG  ++SMSNRCFPTKA +IW  TND+EHIFIVGS+F Y G F PP   DISPNPGRSDP++I++  K
Sbjct:   68 EKVLQNPKWPPSWPYSDEDFSRMDESDDSVFYESPRLVYHIDDPAVGALTEYYKENIKDGEDVLDICSSWVSHYPKHFKGGNVVGLGMNEYELSQNKQLSSFVVKDLNEDPVFPFDDSSFDKVTCVVSVDYLNKPKEIFNEIGRVLRPGGTCLLSMSNRCFPTKAFRIWLNTNDLEHIFIVGSFFQYTGLFGPPSCDDISPNPGRSDPLFIIKATK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig947.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYG4_9PHAE9.170e-14987.83Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A6V1S5I5_HETAK1.400e-11972.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z0P5_9STRA2.290e-10869.44S-adenosyl-L-methionine-dependent methyltransferas... [more]
B8C942_THAPS2.770e-10868.47Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A1E7ELA4_9STRA9.730e-10568.49S-adenosyl-L-methionine-dependent methyltransferas... [more]
B5Y3G7_PHATC1.010e-10466.97Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
L1JA50_GUITC1.040e-10465.64Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7S1B511_9STRA2.090e-10362.78Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0BE51_9RHOD4.600e-10366.96Hypothetical protein n=6 Tax=Rhodosorus marinus Ta... [more]
A0A7S2SKG7_9STRA6.140e-10266.20Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig947contigA-nodosum_M_contig947:280554..284054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVV9
PFAMsMethyltransf_11
Model size1161
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.66e-150
EggNOG OGs28JTZ@1|root,2QS7X@2759|Eukaryota
Ec32 ortholog descriptionMethyltransferase type 11
Ec32 orthologEc-01_002330.1
DescriptionMethyltransferase domain
Cds size666
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig947.28.1prot_A-nodosum_M_contig947.28.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig947 280581..283586 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870447.4073484-UTR-A-nodosum_M_contig947:280553..2805801680870447.4073484-UTR-A-nodosum_M_contig947:280553..280580Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig947 280554..280580 +
1680870447.5013943-UTR-A-nodosum_M_contig947:283586..2840541680870447.5013943-UTR-A-nodosum_M_contig947:283586..284054Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig947 283587..284054 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870447.4242237-CDS-A-nodosum_M_contig947:280580..2807131680870447.4242237-CDS-A-nodosum_M_contig947:280580..280713Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 280581..280713 +
1680870447.4375443-CDS-A-nodosum_M_contig947:281042..2811721680870447.4375443-CDS-A-nodosum_M_contig947:281042..281172Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 281043..281172 +
1680870447.44935-CDS-A-nodosum_M_contig947:281941..2820711680870447.44935-CDS-A-nodosum_M_contig947:281941..282071Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 281942..282071 +
1680870447.4600236-CDS-A-nodosum_M_contig947:282442..2825341680870447.4600236-CDS-A-nodosum_M_contig947:282442..282534Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 282443..282534 +
1680870447.4747827-CDS-A-nodosum_M_contig947:282877..2829451680870447.4747827-CDS-A-nodosum_M_contig947:282877..282945Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 282878..282945 +
1680870447.4867675-CDS-A-nodosum_M_contig947:283473..2835861680870447.4867675-CDS-A-nodosum_M_contig947:283473..283586Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 283474..283586 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig947.28.1

>prot_A-nodosum_M_contig947.28.1 ID=prot_A-nodosum_M_contig947.28.1|Name=mRNA_A-nodosum_M_contig947.28.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=222bp
MTAENVLKSPKWPDKWPFYEDDFNRMDESSDGDFYSQPRLVYHIDDAAVN
ALTKYYSKALPKGADVLDICSSWVSHFPKGWEHGKRTGLGMNQYELSKNE
QLEEYNVKDLNVDPKFPYGDNSFDVVTCVVSVDYLNKPLEVFKEIRRVLR
PGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFEPPEAH
DISPNPGRSDPMYIVEGRKKA*
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mRNA from alignment at A-nodosum_M_contig947:280554..284054+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig947.28.1 ID=mRNA_A-nodosum_M_contig947.28.1|Name=mRNA_A-nodosum_M_contig947.28.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3501bp|location=Sequence derived from alignment at A-nodosum_M_contig947:280554..284054+ (Ascophyllum nodosum dioecious)
TCTACTCCCCACCAATCAAGGGGCAAGATGACCGCGGAGAACGTGCTGAA GTCACCCAAATGGCCCGACAAATGGCCTTTTTACGAAGACGACTTCAACC GCATGGACGAGAGCAGCGACGGCGACTTCTACTCTCAGCCCAGGCTTGTG TACCACATCGGTGAGCCTGATTTCCATAACTTTGAAAGTCCCGCGCACAG CTATCAATAGATTAATAGATTCCCCGAGCCGAGAAGGGCATCGATCGGCC GAGTGCGGTATACAAACGTCGATCTCAGATGCTGTGCGGAGTAACCAAGC AGCGGGACTCGAGCCTTCCGAGGACGACATGATGGTGCTGACTTCGCGCG CCGCTTACCATACATCTCGTGTTGATTCGTGAACCCCGGGGTAACGATCG ATCCCGATGACGATAGCGTAGCTACAAAGCCGTCCGTGCCTTAGTACGAG CGTCTCGTCTCGCCATGTATCCGTTCAAAACCCAACCAGATGATGCCGCG GTCAATGCGCTCACGAAATACTACTCGAAGGCCTTGCCAAAAGGCGCGGA TGTGCTTGACATTTGCTCGTCGTGGGTGAGCCATTTCCCCAAGGGCTGGG AGCACGGCAAACGAACAGGGTAAGGCCGTATCTAATAAGAATTGGGTTGG AATGGGTGAAATGTTGTAGAATTTGTTTTGCGATCGTTCCTTTCTTTACC AGAAAAACCGATACTGTAGCAACATTGCTTTCATATGCCTTCGACCGAGG TGGATTGATGCAAACAAAGCTCAGGGTTGTAACCCTGCCGCAGCCTCGGA AGTAATCGCAGCTCAGTGAGAGATTCAAGCCAATTATTTTCTGTTGGAGC AGTTCTGACAACTCGTCTGGAATAGGCTGTCCGATTCCAAATCAGGTGGC CACAATGTCGGTTGAAACAATATATAGGGGCACTGACTGTGTGCAGCCAC TTTCAATTTTGAGGCATTTCTTGCATAAAATGTGGTCTGGGAGGCAAAGG GTTTTTCTTTCAATATTTCTGGGCCTGATGTGTTTAATGATATGTTATTG TTGAGGGGGACTATTAATAGTAATAGTTGGGCACCGTACGCACGCCTGGG GGGGGGGGTCGGATGGATCGATCCTGATTCTGCTCAACTGCGTTGATCGT CGTCCTTGCTTGTTGCGACAGCAGGGTCTTCATCGTGCCAGCTAGCTCCG AAAAGTTTCGAAAGCACGTGCGACCAACCAAGCACTCAACATCCCTTGTC TCACACGAAGAGCACGACTACTCCACGATTATCACCCGGTGTACAGTAGC TGAAGAAATTTCGCGAGCTCTTGGCCTAACGCCTTTCGCGCCTGCTCCCC CTTTTTTCGATTTTTTAACTGCTGTTCTCTCATCTAAGGTTGGGCATGAA CCAGTACGAGCTGAGCAAGAACGAGCAGCTTGAAGAGTACAACGTGAAGG ACCTCAACGTGGACCCCAAGTTTCCCTACGGGGACAACTCTTTCGACGTG GTGACCTGCGTGGTGTCGGTGAGCCGCGACAGCGCGCGCGAACCCTTCGA TCCTTGACTTGCTGGCACTGTCGAACCGGAGCAACACTCAGGCGTACGGG AACGGGCGCTGGGGGCGTATCAAGCCGCCGGGTGGGAGGGAAGCAACAGG GGATAGTTGTAACTGTTTTGACACCCGCGCTGGTTGCCCTAGTAGACGGC GTCGCTGAAGTGCTCTGCTGAAGAAGCGGATAGCGTTGGCGCGCGCGCGA ATGTCATTCCGCTTTTGGCTCTGCTTTGTAAGATGCGCATGATTTCCACG TGTCAGTTTTTTCATGCTTCGCCCGCCAGAATCACGGACAAGTCCCTCCA ATGTGCGCCTCATCCGTTCCCGCGATCGGGGCGAGACAGGTAGACTACCT GAACAAGCCGTTGGAGGTGTTCAAAGAGATCCGCAGGGTGCTGCGACCGG GGGGGAAGGCGATCATGTCCATGTCCAACAGGTATCAAGAATACAATCTC GTTCCCGTTGCCATGCACGTCTTCCCGAGCTCGAGTGTTCACCGGTGTAT CCTACGCCTCAAGGCATGTTCGTGTCCCCGCATGGCCCGTTTGTACGATC TCTTGCCTTGAATAATTCAGGCTCTTTGTCAAGTGATTCCACAAACTTTC CTCAGGGTTCGAGCGCTTGAGGGCGAACTCTTGTCGAGGACTGACGTGTC TTGTCATACGAACGTGTGATGGTACAGCGGACCTGCGGCGCCCCCTGATT TCGTCATTTTGATGCTATGCGTTGCAGTCCAGTTTACCTCTGTACTTCCG CATATCGTTTTTTTCACACCGCAGGTGCTTTCCGACGAAGGCGATTCAGA TTTGGAATCAAACAAATGATATGGAGCACATCTTCATCGTAGGTCAGTCC AGCCAAAGATGGCTCCTTTCTCTTTACGATCCAGGGCCCCTGGGACGCAG GCCCCCTCGCAGCTGCGCCCCCGTTTTCATATGTATGTTTATACACGGAA TCTCATGTATGTATGTGTCGTTGCTCGATGCTGAGCGTTCCTCAACAGTC CCACCGCTGCTGCATTTGGTATCGTTTGCGTGGGTTGGGGTGAACGGCGC GCGGAATCTTTCCCGAGAGAGCGAGGGATTTGGAGACTCAAAACCTGACA GTACTTTTGGAGGGTGGTAACCAAACGTGCGTGCTCGAGCTCTCCACCGT GAGCTCTGCAGTGGTGCGCAACTCCGCCGCGGCATCCGTGATGGTTAGTT AGTTCCACGGGGCCGTCTCTAGGATCAACATACAACGCTTGGCATCTTAG TATGTGCTCTGTGCAGTAGGTCTCGTCCTCTCGAGCAGCCCCAGATACCT TTTGACTTCAAGCAACATATCGCTCGATGTCGGCGGGCGGTCCAACCGTC GTGTTCGCTCTGCGCAACAGGTTCATACTTCCACTACGCGGGAGGTTTCG AGCCTCCTGAAGCGCACGACATCTCGCCCAACCCCGGCCGGTCGGACCCG ATGTACATCGTGGAGGGACGAAAAAAGGCGTGAAAGTGTAAACTCAAGAT CTGGCTCGCGGGGCAAGAGCGGAAGGCATTTTGGCATATGGGGAGGAACC CTTCCGCGTTATAGGTTGTGCCCTAGAGCTAGGGGAATGATCAGGGATTT ATACCATTGGAAGGCACCCATTTTAGCGTCGGCGGCTCGGGGTTTTGGTG AGGGCTGAATTTGTTTTCCCGCGTGTGAATACCAACGACTTGCGTAGTAG AGTAACGCGTTCTGGAGGAGCGCTTTTTTTTTACTTTATCTCTTACTACA AGGCTCCATTTTGTAGAATGTGTTTGTGTGGTTTTTTTGCCTTAAATTTC TGATCTATCCTGGGAAGGGCATGCTACTTTTGAGAGAGGGGAGGCGGTAA AGAGGGACCAACCCTATCCGACACCGCGGACAAGGACAAGGGCGAGGACA AGGAATATTTCGTGAGGCGAGGGTGAAAAGGTTGAAGAACTTGGAAAGAA G
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Coding sequence (CDS) from alignment at A-nodosum_M_contig947:280554..284054+

>mRNA_A-nodosum_M_contig947.28.1 ID=mRNA_A-nodosum_M_contig947.28.1|Name=mRNA_A-nodosum_M_contig947.28.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=666bp|location=Sequence derived from alignment at A-nodosum_M_contig947:280554..284054+ (Ascophyllum nodosum dioecious)
ATGACCGCGGAGAACGTGCTGAAGTCACCCAAATGGCCCGACAAATGGCC
TTTTTACGAAGACGACTTCAACCGCATGGACGAGAGCAGCGACGGCGACT
TCTACTCTCAGCCCAGGCTTGTGTACCACATCGATGATGCCGCGGTCAAT
GCGCTCACGAAATACTACTCGAAGGCCTTGCCAAAAGGCGCGGATGTGCT
TGACATTTGCTCGTCGTGGGTGAGCCATTTCCCCAAGGGCTGGGAGCACG
GCAAACGAACAGGGTTGGGCATGAACCAGTACGAGCTGAGCAAGAACGAG
CAGCTTGAAGAGTACAACGTGAAGGACCTCAACGTGGACCCCAAGTTTCC
CTACGGGGACAACTCTTTCGACGTGGTGACCTGCGTGGTGTCGGTAGACT
ACCTGAACAAGCCGTTGGAGGTGTTCAAAGAGATCCGCAGGGTGCTGCGA
CCGGGGGGGAAGGCGATCATGTCCATGTCCAACAGGTGCTTTCCGACGAA
GGCGATTCAGATTTGGAATCAAACAAATGATATGGAGCACATCTTCATCG
TAGGTTCATACTTCCACTACGCGGGAGGTTTCGAGCCTCCTGAAGCGCAC
GACATCTCGCCCAACCCCGGCCGGTCGGACCCGATGTACATCGTGGAGGG
ACGAAAAAAGGCGTGA
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