prot_A-nodosum_M_contig947.26.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig947.26.1
Unique Nameprot_A-nodosum_M_contig947.26.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length339
Homology
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BLAST of mRNA_A-nodosum_M_contig947.26.1 vs. uniprot
Match: D7FVV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV8_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 1.690e-69
Identity = 150/314 (47.77%), Postives = 193/314 (61.46%), Query Frame = 0 
Query:   47 MRLRVATVVKETIEKRLAGTATDERGRGQGPGSNGPAAGNMQQQQMEDPSVTSYLQALQSAIMTKVKSMCDVQDDREQREAEELMREIIEFDDEMLAARERLDATRARVARLAAETCRDSLRLAEAADNRAVAALEAKIEQARKERDERGTLLL------------PHGPLGAVEDVDAAATGVYAGIIGDVLEPKVSLLIGKLSELPGPLKSVLQEIPELTASLAKMVQKVEETMTVRDSRTEKLLGKAPPTPLP--KGNAA--------AAGATGSRHPPEEIRETARKARLEQARKEWETAGDGLLGGMFS 338
            MR RV+TVV ET +K LAG  +            G +AG       +D + T+YL+A Q+A+  KV+ +C+VQD RE RE +EL+ EI +F  ++ AAR RL ATRARVARL+A+TCRD+LR++EAAD+RA A LEA    AR+E +  G L L                            G++ G+   V+EPKVS LIGK++ELPGPLKSVLQEIPELTASLA  VQ+ E  +    SRTE LLGKAPPTPL   KG  A        A      R+PPE+ R  AR+AR++QARKEWE  G G++GG+F+
Sbjct:    1 MRYRVSTVVDETTKKSLAGKKS------------GSSAGVAVVAPAQDAATTAYLRAFQAAVADKVRDLCEVQDARESREEDELVGEIFQFSHDLRAARSRLYATRARVARLSADTCRDALRVSEAADDRACAVLEASTAHARRESETGGPLPLRIDDAAXXXXXXXXXXXXXXXXXXXXXXGIFQGLETGVVEPKVSALIGKMAELPGPLKSVLQEIPELTASLAVSVQEAEAAIKAGQSRTEALLGKAPPTPLSSKKGKGAXXXXXXXXANVVEDERYPPEDARAAAREARVQQARKEWEAIGVGVVGGIFN 302
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig947.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVV8_ECTSI1.690e-6947.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..161
NoneNo IPR availableCOILSCoilCoilcoord: 171..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig947contigA-nodosum_M_contig947:237465..238481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig947.26.1mRNA_A-nodosum_M_contig947.26.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig947 237394..239557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig947.26.1 ID=prot_A-nodosum_M_contig947.26.1|Name=mRNA_A-nodosum_M_contig947.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=339bp
MSAQDDKRTPVSSSRKRKAGAMSSASFPRVGPVHKLVPATNDGLTEMRLR
VATVVKETIEKRLAGTATDERGRGQGPGSNGPAAGNMQQQQMEDPSVTSY
LQALQSAIMTKVKSMCDVQDDREQREAEELMREIIEFDDEMLAARERLDA
TRARVARLAAETCRDSLRLAEAADNRAVAALEAKIEQARKERDERGTLLL
PHGPLGAVEDVDAAATGVYAGIIGDVLEPKVSLLIGKLSELPGPLKSVLQ
EIPELTASLAKMVQKVEETMTVRDSRTEKLLGKAPPTPLPKGNAAAAGAT
GSRHPPEEIRETARKARLEQARKEWETAGDGLLGGMFS*
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