prot_A-nodosum_M_contig947.21.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig947.21.1
Unique Nameprot_A-nodosum_M_contig947.21.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length227
Homology
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BLAST of mRNA_A-nodosum_M_contig947.21.1 vs. uniprot
Match: D7FVV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV8_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 4.010e-33
Identity = 88/212 (41.51%), Postives = 120/212 (56.60%), Query Frame = 0 
Query:    1 MRHRVALVVDKTMQNRLVKTEEDEIGKGQEGGSNGPAASKKQQQQVQDPTVAAYLQALQSAIMTKVESMCDVQDDHE-QPEAQLIREIIEFEEEISAARERLVATRARIARLAAEICRDSLRFSEAADDRAIINLEANIEQPRKEKDEGGTLLLLSDGPSDAVEDVAATT------------GVFAGIDGDVLEPKISLLIGKLSELPGPLK 199
            MR+RV+ VVD+T +  L             G  +G +A        QD    AYL+A Q+A+  KV  +C+VQD  E + E +L+ EI +F  ++ AAR RL ATRAR+ARL+A+ CRD+LR SEAADDRA   LEA+    R+E + GG L L  D  +                      G+F G++  V+EPK+S LIGK++ELPGPLK
Sbjct:    1 MRYRVSTVVDETTKKSLA------------GKKSGSSAGVAVVAPAQDAATTAYLRAFQAAVADKVRDLCEVQDARESREEDELVGEIFQFSHDLRAARSRLYATRARVARLSADTCRDALRVSEAADDRACAVLEASTAHARRESETGGPLPLRIDDAAXXXXXXXXXXXXXXXXXXXXXXGIFQGLETGVVEPKVSALIGKMAELPGPLK 200
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig947.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVV8_ECTSI4.010e-3341.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig947contigA-nodosum_M_contig947:212280..213001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig947.21.1mRNA_A-nodosum_M_contig947.21.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig947 212233..214295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig947.21.1 ID=prot_A-nodosum_M_contig947.21.1|Name=mRNA_A-nodosum_M_contig947.21.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=227bp
MRHRVALVVDKTMQNRLVKTEEDEIGKGQEGGSNGPAASKKQQQQVQDPT
VAAYLQALQSAIMTKVESMCDVQDDHEQPEAQLIREIIEFEEEISAARER
LVATRARIARLAAEICRDSLRFSEAADDRAIINLEANIEQPRKEKDEGGT
LLLLSDGPSDAVEDVAATTGVFAGIDGDVLEPKISLLIGKLSELPGPLKV
CSAGHSRAFGISSENGSDGRGNDDCP*
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