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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 2886 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 2274 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870445.1534686-UTR-A-nodosum_M_contig947:112998..113031 | 1680870445.1534686-UTR-A-nodosum_M_contig947:112998..113031 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig947 112999..113031 + |
| 1680870445.209148-UTR-A-nodosum_M_contig947:118752..119331 | 1680870445.209148-UTR-A-nodosum_M_contig947:118752..119331 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig947 118753..119331 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870445.167643-CDS-A-nodosum_M_contig947:113031..114249 | 1680870445.167643-CDS-A-nodosum_M_contig947:113031..114249 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig947 113032..114249 + |
| 1680870445.1793091-CDS-A-nodosum_M_contig947:117289..117529 | 1680870445.1793091-CDS-A-nodosum_M_contig947:117289..117529 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig947 117290..117529 + |
| 1680870445.1915336-CDS-A-nodosum_M_contig947:117936..118752 | 1680870445.1915336-CDS-A-nodosum_M_contig947:117936..118752 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig947 117937..118752 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig947.5.1 >prot_A-nodosum_M_contig947.5.1 ID=prot_A-nodosum_M_contig947.5.1|Name=mRNA_A-nodosum_M_contig947.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=758bp
MAGAEVSTVGVQPSRTANTAVSHHVIQRSRALMKDVSPLSCVPLSCTQIE KMPPNRKCGWLALGRDRCDGELDDRDLSELEKAGREVKVEILQDIMVWLG LGELHDESNNRELTKDEVESLCSIDVRLDRLPHTSASVRRLLHTMKEPSV WMPLPFCAFASDILGATITVWEPCGDGTHVRLYQNGYTNGFFPTSDATNE PIHLLYSGGSRVDGKGFLVRDPCVSEQERFITKVGACNHFDRIYFRPDQV IWKHLGFAQMSSCWNFSTGARLRGRPWKRQPSKTAPLKNPSKEPADPRLQ SSGSNPTGGNLCGATFASGKKRGQCCGATQNPPGSGVCSRHVGAVGTASR ASKKVRMVLTGAGSGEEGQRSGDSGEEDEGGVENWCDKEAARETKAAKSA ESLMKQVHNDEGQARPRESELHMMRKAREERELQPSPFALERLPRLRKED LPLFEEDVGAFAFRFFDLMFFDLMFPREASEIIPTKTNDYHVFCTTQGSG AEARHLKKTSVLGFAKYKDLDDDAVLSMMGVVMQMELTKLPRHNCHWNKD LDFNFMRIRESMSRDLFTSTFLLRRMWVEVTNEKVNKELESIGPESPLYT AVVSGEARGMTKAELLRCRETCERINHIDKEVWDRKLSQYLMAKRRRGNQ ASSARQRYSVGPGGAKWEKPLKRNRPCDNPGCKRETRGACRCSVCGKSGV VMCMACFMTPKKHREAADHRRNTFRNPPRSTELKRHRAKKCIPWENLAEQ PLSGENP* back to topmRNA from alignment at A-nodosum_M_contig947:112999..119331+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig947.5.1 ID=mRNA_A-nodosum_M_contig947.5.1|Name=mRNA_A-nodosum_M_contig947.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6333bp|location=Sequence derived from alignment at A-nodosum_M_contig947:112999..119331+ (Ascophyllum nodosum dioecious) GTATCCATCTTCTCCCGTTCGCGAGCTACCGTCATGGCAGGTGCCGAAGT
TTCCACGGTTGGTGTTCAACCTTCACGCACTGCAAATACTGCTGTATCAC
ACCATGTGATACAACGCTCCCGGGCACTTATGAAAGATGTCTCTCCACTT
TCTTGTGTACCTCTCAGTTGTACACAGATAGAGAAAATGCCGCCAAACAG
GAAGTGTGGATGGTTAGCGTTGGGCAGAGATCGCTGCGACGGAGAGCTGG
ATGACCGAGATCTCTCCGAGCTGGAAAAAGCTGGACGTGAAGTAAAAGTC
GAGATTCTTCAGGATATCATGGTTTGGTTGGGTCTGGGGGAGCTTCACGA
CGAAAGCAACAATAGAGAGCTTACAAAGGACGAAGTTGAGAGCCTGTGTA
GCATTGATGTAAGACTGGACCGACTTCCCCACACGTCGGCGAGTGTAAGA
CGGCTTCTACACACGATGAAGGAGCCCAGCGTTTGGATGCCCCTACCATT
CTGCGCTTTTGCGTCTGACATCTTGGGAGCTACGATCACTGTGTGGGAAC
CATGCGGTGATGGGACGCATGTTCGTCTATACCAGAACGGATATACAAAC
GGATTTTTCCCCACATCCGACGCGACAAACGAACCGATACACTTGCTGTA
TTCTGGAGGTTCGCGTGTGGATGGCAAGGGATTCCTCGTGCGAGATCCAT
GCGTTTCTGAACAAGAGCGGTTTATTACGAAGGTCGGAGCGTGTAACCAC
TTCGACCGCATATATTTTCGGCCCGACCAAGTGATCTGGAAACACTTGGG
TTTCGCGCAGATGAGCTCTTGTTGGAACTTTTCAACAGGGGCAAGACTGC
GGGGCAGACCGTGGAAGAGGCAACCGTCAAAGACGGCTCCGCTAAAAAAC
CCGTCCAAGGAACCAGCAGATCCGCGATTACAAAGCTCAGGCTCTAATCC
CACAGGCGGGAACCTCTGCGGTGCGACGTTCGCCAGCGGGAAAAAAAGGG
GGCAATGTTGTGGTGCGACGCAGAACCCGCCTGGCAGTGGTGTATGCAGT
CGACACGTTGGGGCCGTTGGGACCGCAAGCCGTGCGAGTAAAAAAGTTCG
AATGGTTCTAACAGGCGCGGGATCTGGAGAAGAGGGACAGCGTAGCGGTG
ATTCTGGCGAGGAGGACGAAGGAGGAGTGGAGAACTGGTGTGATAAGGAG
GCAGCGCGAGAAACAAAGGCTGCGAAGTCGGCGGAGAGCTTGATGAAGCA
GGTGAAAGAGATCGAGGACCCTTACAACCGGGATTGTTTCCTGCGAGATC
ACGAATTCCACAACGCGGTAAGGTTGTTGATCACTTTTACAGTCTCGAAT
TATGTGTATTGACCGGTACGTCATGTACTTCCTCGCATCTGTAGAAATTG
TGTACCAGTGATTGATGTCGAAAAACCTTAGGCCAATCGTTATAGGACCA
CAAAAATCGGTCCTATCAATAGCACAGAAATTTGAAAACTTCTTTGCGGA
CGTTTCTGTGTTCCTGCCGTTATGGCCCACAAAATTTGATTTCTGTGCCG
TAAAATTTCTGCGCTCGTGACAAAAGCAAGTTTCTGGGGATTGGAAAACC
TGGGAAACACAGTACAGAAAATGAAAGTTATAACGCCTTCCCAGGGAGAT
ACTACATTGCCTAACAGTCCCTTCGACAGCTATAAAGGTAACTACTTTTA
CCTCCAAGTCTTAGGCCTCGGAAAACGCAGCGGGTCAACTCAACCACACT
GAGATCAAGATGGTTTCTTCAAAGTGTTCCAATCGGAGGCATGTTTTCTT
CAGCGTCTACCCAATCAGAGGCCTGTTTATTTTTTTGGAACAGTGCCGGC
GATGGAATAAACACTAAACACGTATACCTGTAGGCCAAGTTTTTCCCTCA
CTAGAAAGCAATAAAATAAAGCGAAGCGGGTCAACTCAACCCCTCTGAGA
TGAAGATGTTTTCTTCGGCGTCTACCCATTCAGCGCACACCTACCCAATC
AGAGGCCTGTTTATTTTTTTGCAACAGTGCCGGCGATAGAATAAACACTA
CGATGGGCTTCTCCCCGACATTGTACTGTTGACCCTATGTTATTACCATC
GGGGAACCCGTTCAAGTGACATGAAAGAAGTTTTGTATTTGCAGCCTTTG
ATCCCACCTAAACGTTTTGACATTTCCCCCCCCTGACTGGGGGATGCTCA
GAAGGTCTAGGCGCGTTCTGATTTTTCTTTAAACATTAAAAATGTTCCAC
ACACAACCCAGCAGCGATATTTTAACCCATTCAAATGCCATGAAAGAGGT
TTTGTATTTGCAGCCTTTGATCCCACCTAGACGTTTTGACATTTTTTCCC
CCTGACTGGGGGGTGCTCAGAATTCTAGGCGCGTTCTGATTTTTCTTTAA
ACATTAAAAATGTTCCACACACAACCCAGCAGCGATATCACAATGAGGCA
GCTCGGCAGGAGTTTGGGTCTGTTCGTAACACCTTAACTTTCCGGTTAGT
TCGTGCGTACCGCTCGATCGAAACACAAAACACCTCCTCGCACTCTAGGA
CGGGAGGCCTCACGTCGTAGCCACTTCGTATGCAGCTCGTGCGTACCGCT
CAATCGAAACACAAAATAAACCTCCTCGCACTCTCAACGGAGGGCGGAGG
GCCTTACGTCGTGGCCACTTGGTATGTAGTATTAATAGTATGCCGGTCGC
CCCGGTAGCTCAGAGGTACCTCGTAACCCTCTGACACGTTGGGACGTGAG
TTCGACCCCGGCAAACGGGATTTTTCTTACTAAAAAAAATAAAAAATAAA
AACAAAAATAAAAATGCCCAACAGGTGGAGAACGATTAAATCGTTAGTAC
ACAAAGTTCGACTTCACGGTCGACGAGGGAAAGGATTGGCTGGATCCTTC
TCGCGAGAAAAATTAAGGCACGCACCGCAGAAAGAAGGTGGATGAAAAAT
CCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACGAACT
TGATGTCCAGAATGAATGGGAAGAAAACACACACACACACACACAGTTCG
TGCGTACCGCTCAGTTCAAACGCAAACACCTCCTCGCACTCTCCACGGAG
GACGGGGGGCCCCCAGGCCCCCGCGCCCGGAGCCCTTGTGAAATATACTC
CTAGTCCTGTATACAATACATCTTCTCGCCCTTTGTGTGTGTTGTCATGG
TCGATGCACAGCAGTAATATGTATGTTGTGTACAACTACCAAGTATAAGG
TATCAGCTGACAAGGTTAGGTAGCTGATCTGGCGACAGTCAGCTTGTTGT
CTGCCCGCAGCAGTTGCTGTACATACCCAACCACCCAACGTCTGCAGTTG
TTTCGTTCGTCTCCACATGTACTTGTAGCTAGACTACTATTCATCGTGCA
TAGACACTTGTTGACTGTTTTTACCCTCGGCGTGCGGCTTGTCTGCTGTT
CGAGTAGCTCTACATCTACATATATATGATCGGTCACCAATCAATAATTG
ATACTGGTAGGTACAGCCAGCGGTAATACACAGCAGCTGCGTCGCCGCGT
CGCCTGTGTTTTGCCTGCCGCCAGGCCAGAGTATACGCACGTGCGTAAGC
ACCCGCTCTTGCCTGTCCATAAGGTTGTGCCCGTACAACAGTATTGAAGT
GTGTTTTTCATGCCCCCTTCTCGTCAAAGTTTGTTATTAATACTAATATT
AATACTAATACTAGGTATTAATAGGGTTTGATGAACAAGTAAGTGCGAGG
CGTATGCGGCGTCTTGGCGAGGTGACTGTTTCCGTAAGCAATGCTCTTGT
CTGCACGCCGGAGAGGAACTCTTCTTCGGCATTGATATTGATTGATAGGT
AATACTGTACTGTACTGTACTGTAATAGTTAGATCTGCTCAAAAGCTGGG
AACGACGCACGGTGACCGTGTGTGCATAGAACGGCCACATAGTCTGGCGA
AACTTGAAGCAATTGTACTGAGAGGCGAGTTTTAATTCAAAAATCGAGAT
CGGTGAGATGATGTGACATGGAAGGCCGCAGAGGAGAGAAGCCTAAGCTC
TGCAACCCCCGTTTTTTCATGTGGCCCGTAGCGGCCGTCAGAAAATGTGA
GCCCATAAATTTTTCTGGGTCTTTTCGAGCACGGACATGAACACATTTCT
GTGTTCAAAATTTTTGTGCACCGTTTTCCCATAACGATTGGTCTCAGCTC
ATTAGTGTTATGGTGTCGCCTGGAAAGGTAGACGGAATGTTGCGATGCTT
CCACGCGATAATGCAGCTCAACATTTTGTGAAAATGTTTAGGTTCATAAT
GACGAAGGCCAAGCGAGGCCGCGAGAGAGTGAGCTCCACATGATGCGCAA
GGCGAGAGAAGAGCGGGAGCTACAACCATCACCTTTTGCGTTAGAACGTC
TGCCACGACTTCGGAAGGAAGACCTGCCGCTTTTCGAAGAAGATGTTGGC
GCATTCGCATTCAGGTTCTTCGACTTGATGTTCTTTGACTTGATGTTCCC
ACGGGAGGCGAGCGAAATAATTCCGACGAAGGTGGGGCGCGGCATTAATA
TCAGTACTTGTAGGCTCGATAGGGATGGTTTAAGGTGACTGTAGATGAGT
CGCAGATGCCCGCGAATGTGTAGTTCATAAATTCGTTGTAGCATCTGTTT
TCTCAGGAGTTGGTCGGTCAGGTAACGTGGCCCACGGACAAACACCACAA
CCTAACGTTTGCCCCACGCATGCTCATGTGCACTAATAAATTATGTCGTG
TATCAACATGGTTTGCTTCTTTGTCCATATTGGTGATATTGTCGTGTTTA
CTCCAGTGGCGAACGATACAGCGTATTTGCCCTCGTGTGTTCTTTGGCTT
GGTGAATAACCCCCTTTCTCTCCTTCACGGCCCCCACTTTTTTTGTCAAT
ATTGTTTTTGTAATATTGAAACTTGGAATGGGTCGAAGACAAACGACTAC
CACGTCTTTTGTACAACACAAGGGAGTGGTGCAGAAGCGCGGCACCTGAA
AAAAACGTCGGTTCTAGGCTTCGCCAAGTACAAGGACTTGGACGACGATG
CCGTGTTGAGCATGATGGGGGTTGTCATGCAAATGGAGCTGACGAAACTT
CCCAGACACAACTGCCACTGGAACAAAGATCTCGACTTCAACTTCATGCG
TATCCGTGAAAGTATGTCTCGGGATCTGTTCACCAGCACTTTCCTTCTCC
GGCGGATGTGGGTGGAGGTCACCAACGAGAAAGTAAACAAGGAGTTGGAG
AGCATAGGGCCTGAAAGCCCGCTGTACACGGCGGTCGTGTCTGGCGAAGC
AAGGGGAATGACGAAGGCCGAGCTCCTGAGATGCCGCGAGACTTGCGAGC
GCATCAACCACATCGACAAGGAGGTATGGGACCGGAAACTCAGCCAGTAC
CTGATGGCCAAACGCAGGAGAGGAAACCAGGCATCTTCCGCGCGACAGCG
GTACAGCGTCGGGCCTGGAGGAGCCAAGTGGGAGAAACCGCTGAAAAGGA
ACCGACCTTGCGACAACCCAGGCTGCAAACGAGAAACGCGAGGGGCATGT
CGATGCTCTGTGTGCGGGAAGAGTGGGGTCGTCATGTGTATGGCGTGTTT
TATGACACCGAAGAAGCACCGCGAGGCGGCCGACCACCGGCGGAATACTT
TCCGAAACCCGCCTCGATCTACCGAGCTGAAGCGACACCGTGCCAAAAAA
TGCATCCCATGGGAAAACCTCGCGGAACAACCTCTTTCGGGCGAAAACCC
ATAAGTGGGAACGGGGGGAGACACAGAGGATGTAGGAGGGGGATGTCGAC
TGATTGTGATAGAGACGAACACCTGATTGGTACGAAACGAACGTAAAAGT
TGGATCATGTCTGTTGCGAAGGCCTATCTCAGGGAGTTGGATAGGTTGTC
TCGGAACCCACTTTCTCACGTTAAAAAAAAAATGAACCGCACCTCAACCT
TCCGAGTATCCACCCGGTCAGGGGGGAAAGTTGTCAGAATGTTTAGGTGC
GAAAAAGGTTGCAAGAACAAAACACCTTCAAGGGGTTTTATAGTATTCCC
CAATGATATTGTATAGAGCTAGTAGCATAGGGTTATGCCCTCGTTCTTGT
TCCAGTGCAATGTGTGTGTGTGTGCATGTGTTGTCATCCCATTTGTTCTG
GACGTCAGACTTGTGGACACACCAGCCGGGGTCACATAGGAGAAAGGTCA
CACAGGATTTCCTTCTGCGGTGCTTGCCTTAATTTTTCTCGCGAGAAGGA
TTCAGCCGTCACTTTCCCTCGTCGACCGTGAAGTCGAATGTTGTGTACCC
ACGAATGAATCGCTCTCCACTTGTTGGGCATGA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig947:112999..119331+ >mRNA_A-nodosum_M_contig947.5.1 ID=mRNA_A-nodosum_M_contig947.5.1|Name=mRNA_A-nodosum_M_contig947.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2274bp|location=Sequence derived from alignment at A-nodosum_M_contig947:112999..119331+ (Ascophyllum nodosum dioecious) ATGGCAGGTGCCGAAGTTTCCACGGTTGGTGTTCAACCTTCACGCACTGC AAATACTGCTGTATCACACCATGTGATACAACGCTCCCGGGCACTTATGA AAGATGTCTCTCCACTTTCTTGTGTACCTCTCAGTTGTACACAGATAGAG AAAATGCCGCCAAACAGGAAGTGTGGATGGTTAGCGTTGGGCAGAGATCG CTGCGACGGAGAGCTGGATGACCGAGATCTCTCCGAGCTGGAAAAAGCTG GACGTGAAGTAAAAGTCGAGATTCTTCAGGATATCATGGTTTGGTTGGGT CTGGGGGAGCTTCACGACGAAAGCAACAATAGAGAGCTTACAAAGGACGA AGTTGAGAGCCTGTGTAGCATTGATGTAAGACTGGACCGACTTCCCCACA CGTCGGCGAGTGTAAGACGGCTTCTACACACGATGAAGGAGCCCAGCGTT TGGATGCCCCTACCATTCTGCGCTTTTGCGTCTGACATCTTGGGAGCTAC GATCACTGTGTGGGAACCATGCGGTGATGGGACGCATGTTCGTCTATACC AGAACGGATATACAAACGGATTTTTCCCCACATCCGACGCGACAAACGAA CCGATACACTTGCTGTATTCTGGAGGTTCGCGTGTGGATGGCAAGGGATT CCTCGTGCGAGATCCATGCGTTTCTGAACAAGAGCGGTTTATTACGAAGG TCGGAGCGTGTAACCACTTCGACCGCATATATTTTCGGCCCGACCAAGTG ATCTGGAAACACTTGGGTTTCGCGCAGATGAGCTCTTGTTGGAACTTTTC AACAGGGGCAAGACTGCGGGGCAGACCGTGGAAGAGGCAACCGTCAAAGA CGGCTCCGCTAAAAAACCCGTCCAAGGAACCAGCAGATCCGCGATTACAA AGCTCAGGCTCTAATCCCACAGGCGGGAACCTCTGCGGTGCGACGTTCGC CAGCGGGAAAAAAAGGGGGCAATGTTGTGGTGCGACGCAGAACCCGCCTG GCAGTGGTGTATGCAGTCGACACGTTGGGGCCGTTGGGACCGCAAGCCGT GCGAGTAAAAAAGTTCGAATGGTTCTAACAGGCGCGGGATCTGGAGAAGA GGGACAGCGTAGCGGTGATTCTGGCGAGGAGGACGAAGGAGGAGTGGAGA ACTGGTGTGATAAGGAGGCAGCGCGAGAAACAAAGGCTGCGAAGTCGGCG GAGAGCTTGATGAAGCAGGTTCATAATGACGAAGGCCAAGCGAGGCCGCG AGAGAGTGAGCTCCACATGATGCGCAAGGCGAGAGAAGAGCGGGAGCTAC AACCATCACCTTTTGCGTTAGAACGTCTGCCACGACTTCGGAAGGAAGAC CTGCCGCTTTTCGAAGAAGATGTTGGCGCATTCGCATTCAGGTTCTTCGA CTTGATGTTCTTTGACTTGATGTTCCCACGGGAGGCGAGCGAAATAATTC CGACGAAGACAAACGACTACCACGTCTTTTGTACAACACAAGGGAGTGGT GCAGAAGCGCGGCACCTGAAAAAAACGTCGGTTCTAGGCTTCGCCAAGTA CAAGGACTTGGACGACGATGCCGTGTTGAGCATGATGGGGGTTGTCATGC AAATGGAGCTGACGAAACTTCCCAGACACAACTGCCACTGGAACAAAGAT CTCGACTTCAACTTCATGCGTATCCGTGAAAGTATGTCTCGGGATCTGTT CACCAGCACTTTCCTTCTCCGGCGGATGTGGGTGGAGGTCACCAACGAGA AAGTAAACAAGGAGTTGGAGAGCATAGGGCCTGAAAGCCCGCTGTACACG GCGGTCGTGTCTGGCGAAGCAAGGGGAATGACGAAGGCCGAGCTCCTGAG ATGCCGCGAGACTTGCGAGCGCATCAACCACATCGACAAGGAGGTATGGG ACCGGAAACTCAGCCAGTACCTGATGGCCAAACGCAGGAGAGGAAACCAG GCATCTTCCGCGCGACAGCGGTACAGCGTCGGGCCTGGAGGAGCCAAGTG GGAGAAACCGCTGAAAAGGAACCGACCTTGCGACAACCCAGGCTGCAAAC GAGAAACGCGAGGGGCATGTCGATGCTCTGTGTGCGGGAAGAGTGGGGTC GTCATGTGTATGGCGTGTTTTATGACACCGAAGAAGCACCGCGAGGCGGC CGACCACCGGCGGAATACTTTCCGAAACCCGCCTCGATCTACCGAGCTGA AGCGACACCGTGCCAAAAAATGCATCCCATGGGAAAACCTCGCGGAACAA CCTCTTTCGGGCGAAAACCCATAA back to top
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