prot_A-nodosum_M_contig944.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig944.8.1
Unique Nameprot_A-nodosum_M_contig944.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length150
Homology
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: D8LEU3_ECTSI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU3_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.850e-81
Identity = 120/150 (80.00%), Postives = 136/150 (90.67%), Query Frame = 0
Query:    1 MIVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDKKA-KKRPSGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 149
            MIVCIA++GR+NEPLFLRTYTDA+GEEEE DA  RLHNIVHSSLDVVG++K  +K  SG  D  TDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRE +LK+VF+++H+ YVN LRNPFSPLAKP+DSAKFRL+VDRQIN+YNS
Sbjct:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEE-DANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: A0A836CHF0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.000e-47
Identity = 81/153 (52.94%), Postives = 106/153 (69.28%), Query Frame = 0
Query:    1 MIVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDKKAKKRPSGVTD----ALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 149
            MIVC+AV+ + N PL +RTY D    E++ D T R H+IVH+SLDVV + +A  R          A  DMFLGHLCP+DEY VYGY+TST++K+LAVLE+    R+S+L  +  +IH  YVN   NPFSPL +PI S +F+LAVDRQ+N YN+
Sbjct:    1 MIVCLAVISKANAPLLVRTYVDPSLGEDQADTTIRFHHIVHTSLDVVQEARAGDRHVPACRRWCAATRDMFLGHLCPMDEYEVYGYVTSTQVKILAVLEETVTSRKSELAALLHTIHGFYVNYQLNPFSPLNQPIGSERFKLAVDRQVNGYNA 153          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: W7T3S0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3S0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.720e-36
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 0
Query:    1 MIVCIAVVGRKNEPLFLRTYT---DADGEEEEEDATHRLHNIVHSSLDVVGD--KKAKKRPSGVTDA---LTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYN 148
            MI CIAVVG+KNE L+L+ +    DA       D     H I HS+LD   +  K   +RPS    +     DMFLG+LCPI+E+RVYGY TST++K LA+L + N +RE+DLK VF  +H LYV+ L++PFSPL   I S +F   V+RQ+  YN
Sbjct:    1 MIACIAVVGKKNELLYLKPFLAQPDASS-----DYFLSFHFIAHSALDAFDERSKSVSRRPSPSFPSPASTNDMFLGYLCPIEEFRVYGYKTSTQIKFLAILTENNPVRENDLKSVFQGLHILYVSYLQSPFSPLTGKITSERFSKGVERQVVVYN 151          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: D0N1W2_PHYIT (Trafficking protein particle complex subunit 2-like protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0N1W2_PHYIT)

HSP 1 Score: 123 bits (308), Expect = 3.190e-33
Identity = 65/149 (43.62%), Postives = 96/149 (64.43%), Query Frame = 0
Query:    1 MIVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDKKAKKRPSGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 149
            MI C+AV+G  N PL++RT+    GEE E+      H I H SLDV+ +K    R +G+T +  DM+LG L PI++YRVYGY+T+T +K + VL+D   +RES+L+  FA +H LYVN + NPF+PL + + S  F   V   + ++N+
Sbjct:    1 MIACVAVIGAANSPLYIRTF----GEEGEDLG---FHYIAHVSLDVIEEKL---RGAGITSSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPLGERLTSQTFDKRVSNLVVQHNT 138          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: K3WRF7_GLOUD (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF7_GLOUD)

HSP 1 Score: 121 bits (304), Expect = 1.290e-32
Identity = 62/149 (41.61%), Postives = 97/149 (65.10%), Query Frame = 0
Query:    1 MIVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDKKAKKRPSGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 149
            MI C+AV+G  N PL++RT+      +EEED     H I H SLD++ +K    R +G+  A  DM+LG L PI++YRVYGY+T+T +K +A+++D + +RES+L+  FA +H +YVN + NPF+P+ + I S  F   V   + ++N+
Sbjct:    1 MISCVAVIGAANSPLYVRTF------DEEEDLG--FHYIAHVSLDIIEEKL---RSAGIMAAKDDMYLGFLGPIEDYRVYGYVTNTSIKFVAIMQD-SPVRESELRSFFAEMHKMYVNAMSNPFAPIGERITSQNFEKKVYNLVLQHNT 137          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: A0A8K1FMJ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMJ4_PYTOL)

HSP 1 Score: 121 bits (303), Expect = 1.770e-32
Identity = 64/149 (42.95%), Postives = 95/149 (63.76%), Query Frame = 0
Query:    1 MIVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDKKAKKRPSGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 149
            MI C+AV+G  N PLF+RT+        EED     H I H +LD++ +K    R +    A  DM+LG L PI++YRVYGY+T+T +KL+A+LED + +RES+L+  F+ +H LYVN + NPF+P+ + I S +F   V   + ++NS
Sbjct:    1 MISCVAVIGAANSPLFIRTF--------EEDEDLGFHYIAHVALDIIEEKV---RGASNIAAKDDMYLGFLGPIEDYRVYGYVTNTSVKLVAILED-SPVRESELRSFFSELHKLYVNAVSNPFAPIGERITSQQFDKKVYNLVLQHNS 137          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: A0A7S2WDT6_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDT6_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.570e-31
Identity = 65/154 (42.21%), Postives = 90/154 (58.44%), Query Frame = 0
Query:    2 IVCIAVVGRKNEPLFLRTYT------DADGEEEEEDATHRLHNIVHSSLDVVGDKKAKKRP-SGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRE--SDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINE 146
            I C++VVGR NEPLF+R Y       DA     E+DA  R H ++H+SLDVV +K    R  S      T MFLG+LCP+DE+ +YGY+T+T  KL+  LED        +D+  +F  IHDL +    NPF+PL K + S  F+  +D+ + E
Sbjct:   15 IACVSVVGRTNEPLFMRVYASEEAPFDALNPGSEQDAL-RFHYMIHASLDVVDEKHRPPRTESSPAPTKTSMFLGYLCPVDEFHLYGYVTNTHNKLIVALEDQAGTGGGIADMTGLFKRIHDLLIKQALNPFAPLGKVVASTNFQNGIDKLVQE 167          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: A0A7S0S3M5_9CHLO (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S3M5_9CHLO)

HSP 1 Score: 118 bits (295), Expect = 5.880e-31
Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 0
Query:    2 IVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDKKAKKRPSGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEY 147
            IVC AVVG++N+PL+L+TY  A+GE+       + H IVH SLD V +K   KRP+G    + D +LG L P +E++VYGY+T+T +KLL VL+D +  +E  + K    +H  YV+   NPF     PI SAKF   VD  +  Y
Sbjct:   26 IVCAAVVGQQNQPLYLKTYPAAEGEQ-----LLKFHYIVHCSLDAVEEKVLLKRPAG---EVPDPYLGLLYPTEEFKVYGYLTNTAIKLLVVLDDAS-AKEEAVTKALRRMHTAYVDTASNPFFAFGLPITSAKFDALVDAAVAGY 162          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: UPI0018AEA172 (trafficking protein particle complex subunit 2-like protein n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AEA172)

HSP 1 Score: 115 bits (288), Expect = 3.700e-30
Identity = 62/149 (41.61%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    1 MIVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDKKAKKRPSGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 149
            MIVC+AVVG +N P+FL+++TD+D      DA  +LH+IVH SLDV+ ++    + SG T  L D FLG L P+D+ +VYGY+T+T +K + V  D  D+++ DL+  F  +H  YV+ + NPF    K I S  F   V   +  + S
Sbjct:    1 MIVCVAVVGHQNNPVFLQSFTDSD------DAL-KLHHIVHCSLDVIDERVNNPKKSGPT--LNDTFLGVLYPMDDCKVYGYLTNTNVKFIMVTTDT-DLKDGDLRSFFKDLHSAYVDAVSNPFHIPGKKITSKSFAERVSSIVKSFRS 139          
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Match: A0A6P4AAA9_ZIZJJ (Trafficking protein particle complex subunit n=2 Tax=Rosales TaxID=3744 RepID=A0A6P4AAA9_ZIZJJ)

HSP 1 Score: 115 bits (287), Expect = 5.230e-30
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 0
Query:    1 MIVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDKKAKKRPSGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEY 147
            MIVC+AVVG +N PL+++++TDAD      DA  +LH+IVH SLDV+ +K    + SG T  L + FLG L P + Y+VYGY+T+T++K + V  D+ D++++D++  F S H  YV+ + NPF    K I S  F   V   +  +
Sbjct:    1 MIVCVAVVGHQNNPLYIQSFTDAD------DAL-KLHHIVHCSLDVIDEKVNNPKKSGPT--LNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDL-DVKDADVRNYFRSFHAAYVDAVSNPFHVPGKKITSKTFAERVTNIVKSF 137          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig944.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU3_ECTSI1.850e-8180.00Trafficking protein particle complex subunit 2-lik... [more]
A0A836CHF0_9STRA1.000e-4752.94Trafficking protein particle complex subunit 2-lik... [more]
W7T3S0_9STRA1.720e-3647.44Trafficking protein particle complex subunit 2-lik... [more]
D0N1W2_PHYIT3.190e-3343.62Trafficking protein particle complex subunit 2-lik... [more]
K3WRF7_GLOUD1.290e-3241.61Trafficking protein particle complex subunit 2-lik... [more]
A0A8K1FMJ4_PYTOL1.770e-3242.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2WDT6_9STRA3.570e-3142.21Trafficking protein particle complex subunit 2-lik... [more]
A0A7S0S3M5_9CHLO5.880e-3143.84Trafficking protein particle complex subunit 2-lik... [more]
UPI0018AEA1723.700e-3041.61trafficking protein particle complex subunit 2-lik... [more]
A0A6P4AAA9_ZIZJJ5.230e-3041.50Trafficking protein particle complex subunit n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.70coord: 1..148
e-value: 8.7E-34
score: 118.6
NoneNo IPR availablePANTHERPTHR12403:SF11TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2-LIKE PROTEINcoord: 1..145
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 7..142
e-value: 4.8E-25
score: 88.2
IPR006722Trafficking protein particle complex subunit 2PANTHERPTHR12403TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2coord: 1..145
IPR044760Trafficking protein particle complex subunit 2-likeCDDcd14854TRAPPC2Lcoord: 3..145
e-value: 5.71841E-52
score: 159.678
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig944contigA-nodosum_M_contig944:47033..51502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig944.8.1mRNA_A-nodosum_M_contig944.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig944 47033..52172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig944.8.1 ID=prot_A-nodosum_M_contig944.8.1|Name=mRNA_A-nodosum_M_contig944.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=150bp
MIVCIAVVGRKNEPLFLRTYTDADGEEEEEDATHRLHNIVHSSLDVVGDK
KAKKRPSGVTDALTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDI
RESDLKKVFASIHDLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006722Sedlin
IPR044760TRAPPC2L
IPR011012Longin-like_dom_sf