prot_A-nodosum_M_contig94.71.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig94.71.3
Unique Name	prot_A-nodosum_M_contig94.71.3
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	429

Homology

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A6H5KCC9_9PHAE (PSII_BNR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCC9_9PHAE)

HSP 1 Score: 600 bits (1546), Expect = 1.560e-212
Identity = 309/420 (73.57%), Postives = 348/420 (82.86%), Query Frame = 0

Query:    8 STCAFIAS---AGAFVPQAHLPLRASLLCRGSRHQ-ARASSCRQLLMGKDGNSESREGFLKDSAAGVVAGAIAVAASTGVVQPASAAAIKAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPDANTDAKFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFGGDKGFALGAEGVLLKYIPNQL 423
            S CA +A+     AFVP          +  G  H+   A+S R + M  D  SESR GFLKDSA G+  GA+AV ASTG    A AA + AWE IQLPV++VLYDIAFDP HPDHGLVVGA+GTFLETFDGG KW VRTFG LD EEEINYRFQKVS+Y+DEIF++GKPPILLHSKD G +WERV L+PKLPGEPSNIVA+G  KAEMTTS+GAIYYTKNAG+N+ AQVKETVDATLNRISSSGVSGASYF+GSIIGTTRAED GSYLAVSSRGNFYLTWSPGQDFW PHNRG SRRIQNMGF+RGR+A+GLWMTLNGG MQ +   P+   D  F++  IKSGGYGIIDVAWK+DNEAWAVGGGGSLWYSTDGG+TFK+SSGATN+ A NLY+VKFFGGDKGFA+G++GVLLKYIP+QL
Sbjct:    6 SGCALLAALAGVSAFVPHGLTKTAQQQVKGGFGHEHTSAASSRPMRMSLDDVSESRGGFLKDSALGLAVGAVAVGASTGAPPAAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLVVGAQGTFLETFDGGYKWSVRTFGNLDEEEEINYRFQKVSMYNDEIFIIGKPPILLHSKDAGKTWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAED-GSYLAVSSRGNFYLTWSPGQDFWIPHNRGTSRRIQNMGFVRGRAAEGLWMTLNGGAMQMSKTLPEGTNDPVFSETAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGETFKFSSGATNIGA-NLYDVKFFGGDKGFAIGSDGVLLKYIPDQL 423

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A836CNS8_9STRA (Photosynthesis system II assembly factor YCF48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS8_9STRA)

HSP 1 Score: 482 bits (1241), Expect = 3.080e-166
Identity = 250/369 (67.75%), Postives = 284/369 (76.96%), Query Frame = 0

Query:   57 ESREGFLKDSAAGVVAGAIAVAASTGVVQPASAAA----IKAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQ--RTLEKPDANTDAKFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFGGDKGFALGAEGVLLKYI 419
            ESR  F K S+A +V GA AVA   GV  P++A A    +KAWE I LPV+T LYDIAFD     HG VVGAKGTFLET DGG  W  RTFG LD EEEINYRF+KVS  D E F++GKPPILLH+KD G SWERV L+PKLPGEPSNIVA+G+GKAEMTTSTGA+YYT NAGLN+ AQVKET+DATLNRISSSGVSGASYF+GSIIGT R +  G+YLAVSSRGNFYLTW PGQDFW PHNRG SRRIQNMGF+ G    G+WMTLNGGVMQ  ++ +     TD  F  V IK+GGYGIID AWKD  EAWAVGGGG+LW S DGGKT+KY   A  +   NLY +KFF  + GF LG++GVLL+Y+
Sbjct:   50 ESRRDFFKSSSA-LVGGAAAVAGLAGVTAPSAAEAAPVKVKAWEQIALPVATTLYDIAFDTADTQHGFVVGAKGTFLETRDGGKTWDPRTFGNLDAEEEINYRFEKVSFVDGEAFIIGKPPILLHTKDKGESWERVPLSPKLPGEPSNIVALGSGKAEMTTSTGAVYYTNNAGLNWKAQVKETIDATLNRISSSGVSGASYFTGSIIGTLR-DKSGAYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVEGDINKGVWMTLNGGVMQISKSGDSLSVATDPTFEPVDIKTGGYGIIDAAWKDAKEAWAVGGGGNLWVSMDGGKTYKYDKVADKIPG-NLYTIKFFSPESGFVLGSDGVLLRYL 415

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A7S2XVG6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVG6_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 9.740e-150
Identity = 230/366 (62.84%), Postives = 277/366 (75.68%), Query Frame = 0

Query:   54 GNSESREGFLKDSAAGVVAGAIAVAASTGVVQPASAAAIKAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPD-ANTDAKFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFGGDKGFALGAEGVLLKY 418
            G+++ RE FL +SA    AGA A++A  G    ASAA  +AW  ++LP ST L+D+ FD   P+HG +VG+KGTFLETFD G  WGVRTF  LD EEEI YRF+KVS  D E +++GKP ILLHSKD G +WER+ L+PKLPGEP +IVA G   AEMTTS GAIYYT NA  NF AQVKET+DATLNRISSSGVSGASYF+GSIIGT R +  G+YLAVSSRGNFYLTW PG DFW PHNRG SRRIQ MGF++   + GLWMTLNGGV+Q +    D +N+D +F    IK+GGYGI DVAWKD+NE WAVGGGG+++ S DGGK F +++ A ++   NLYNVKFF   KGF LG++G+LLKY
Sbjct:   54 GSADRRE-FLVNSAKVATAGA-AISALPG---SASAARSQAWTAVELPASTTLFDLDFDTKDPNHGFLVGSKGTFLETFDAGETWGVRTFSQLDAEEEITYRFEKVSFLDGEAWIIGKPSILLHSKDEGRNWERIPLSPKLPGEPCDIVATGAETAEMTTSAGAIYYTSNAARNFKAQVKETIDATLNRISSSGVSGASYFTGSIIGTIR-DSTGAYLAVSSRGNFYLTWQPGDDFWIPHNRGTSRRIQQMGFVQDDLSKGLWMTLNGGVLQISKTGQDVSNSDVEFKAANIKTGGYGITDVAWKDENEVWAVGGGGTMFVSVDGGKNFVFNNAADDIPG-NLYNVKFFKNGKGFVLGSDGILLKY 412

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A7S3XNC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNC3_HETAK)

HSP 1 Score: 434 bits (1116), Expect = 5.850e-147
Identity = 229/384 (59.64%), Postives = 282/384 (73.44%), Query Frame = 0

Query:   40 ARASSCRQLLMGKDGNSESREGFLKDSAAGVVAGAIAVAASTGVVQPASAAAI---KAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPDAN--TDAKFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFGGDKGFALGAEGVLLKY 418
            +RASS   +  G    SE    F+  SAA  V G +A   ++G+  P+  AA    KAWE ++LP    L+DI FD  +PDHG +VGAKGTFLETF+GG  WGVRTF  LD +EEINYRF+KVS  D E +++GKPPILLH++D+G SWER+ L+PKLPGEPS I+A GN +AEMTTSTGAIYYT N   N+ AQ+KET+DATLNR+SSSGVSGAS+FSG+I    R + +G+YLAVSSRGNFYLTW PGQDFW PHNRG  RRIQNMGFI+    +G+WM+LNGG++Q T    + N   DAKF D  IKSGGYGI+D  WKD+ E WAVGGGG+++YS DGG  FK+ S A  +   NLY  KFFG +KGF LG++GVLL+Y
Sbjct:   65 SRASSQLNMAEGDISRSE----FITKSAA--VGGTVA---ASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKR-DVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPG-NLYTCKFFGPNKGFVLGSDGVLLRY 437

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A7R9U3Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Z4_9STRA)

HSP 1 Score: 422 bits (1084), Expect = 1.090e-142
Identity = 231/403 (57.32%), Postives = 283/403 (70.22%), Query Frame = 0

Query:   25 LPLRASL-----LCRGSRHQARASSCRQLLMGKDGNSESREGFLKDSAAGVVAGAIAVAASTGVVQP-ASAAAIKAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPD-ANTDA-KFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFGGDKGFALGAEGVLLKYI 419
            LPL A+      L R SR   R S+   +  G     +SR G L+ +A   V  A+        V+P AS A    W  + +  +  LYDI+FDP  P HG++VGAKG+F E+FDGG  W  R+F ALD +EEI YRF++VSL   E +++GKP ILLH+KD+G SWERV L+PKLPGEPS I+ +G+G AEMTTSTGAIYYT N GLN+ AQVKET+DATLNRISSSGV GASYFSGSI  T R +D G YLAVSSRGNFYLTW PGQDFW PHNRG SRRIQNMGFI+G   +G+WM+LNGG +Q T   PD A+TD   F  V + SGGYGIID+AWK+D E WAVGG GS++ S DGG +F +   A  +   NLY+V FFG D+GF LG++GVLL+Y+
Sbjct:   13 LPLAAAFTAAPRLQRSSRELLRLSAAENVETG-----DSRRGALERAALAGVGAAL--------VRPEASEAGDAFWRRVDVGTTETLYDISFDPSDPKHGMLVGAKGSFFESFDGGKSWQPRSFSALDPDEEITYRFEQVSLNGGEAYIIGKPAILLHTKDSGKSWERVPLSPKLPGEPSTIIGLGSGNAEMTTSTGAIYYTTNGGLNWKAQVKETIDATLNRISSSGVKGASYFSGSIALTHR-DDQGKYLAVSSRGNFYLTWEPGQDFWIPHNRGTSRRIQNMGFIKGIQDNGVWMSLNGGEVQLTATAPDMASTDLIDFKKVNLNSGGYGIIDLAWKNDREVWAVGGSGSIFVSRDGGGSFSFDKSADKIPG-NLYSVSFFG-DQGFVLGSDGVLLRYV 399

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A7S2UBA7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBA7_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 7.660e-139
Identity = 219/385 (56.88%), Postives = 274/385 (71.17%), Query Frame = 0

Query:   39 QARASSCRQLLMGKDGNSESREGFL-KDSAAGVVAGAIAVAASTGVVQPASAAAIKAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPDANTDA-KFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFG--GDKGFALGAEGVLLKYI 419
            +A +S+    +   D  SE R  F+ K  +A  +A    V  S G+ QPA AAA K W+ IQLP    LYD+ FD   P HG +VGA+G F ET DGGN W  R+F  LD EEE+ YRFQ VS  D E +V+GKP ++LH+KD+G +WER+ L+PKLPGEP++I+A G GKAEMTTS+GA+Y T+NAG N+ AQVKET+DATLNRISSSGVSGASYFSGSII   R +D+G+YLAVSSRGNF+LTW PGQDFW PHNRG SRRIQ+MGF+ G    GLWMTLNGG +    +  D   D   F +  IK+GGYGI DVAW++ +E WAVGG  +++ S DGGK+FK+   A N+   NLYNVKFF    + G+A+G+ G+LLKYI
Sbjct:   26 RACSSTSTLSMSAADSGSEGRRTFVTKTGSAAAMASLATVTGSAGLPQPAEAAASKMWKQIQLPFEDTLYDVDFDS--PTHGYLVGARGAFAETNDGGNTWEARSFSNLDAEEEVTYRFQVVSFQDGEGWVLGKPTLMLHTKDSGKTWERIPLSPKLPGEPTSILAKGPGKAEMTTSSGAVYVTENAGRNWKAQVKETIDATLNRISSSGVSGASYFSGSIINQVR-DDEGAYLAVSSRGNFFLTWEPGQDFWIPHNRGQSRRIQSMGFVEGDIHKGLWMTLNGGKLLVANKDIDLKKDDFPFVEADIKTGGYGITDVAWRNTDEVWAVGGSNTMYVSFDGGKSFKFDKSANNIPG-NLYNVKFFKQFSNAGWAVGSNGLLLKYI 406

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A7S2SCF7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCF7_9STRA)

HSP 1 Score: 407 bits (1045), Expect = 8.520e-137
Identity = 219/381 (57.48%), Postives = 274/381 (71.92%), Query Frame = 0

Query:   41 RASSCRQLLMGKDGNSESREGFLKDSAAGVVAGAIAVAASTGVVQPASAAAIKAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPDANTDA-KFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFG--GDKGFALGAEGVLLKY 418
            R+ +C  L M  DG  E R  F+  +A+   A +IA + + GV  PA AAA K W   ++P    +YDI FD   P HG VVGA+G+  ET DGG  W  R+F  LD EEEI YRFQ VS  D E +V+GKP +LLH+KD+G SWER+ L+PKLPGEPS+I+A+G  KAEMTTS+GA+Y T NAG N+ AQVKET+DATLNRISSSGVSGASYF+GSII   R +DDG+YLAVSSRGNF+LTW PGQDFW PHNRG SRRIQNMGF+ G    GLWMTLNGG +  + + PD + DA +F +  IK+GGYG+ DVAW+++NEAWAVGG  +++ S DGGK F +   A N    NLY+V+FF    + G+ALG+ G+LL+Y
Sbjct:   26 RSKTCTNLFMAADGV-EDRRAFVGKTASATAALSIA-SVTGGVAAPAEAAASKMWTKSKVPFEETVYDIDFDS--PTHGYVVGARGSLAETNDGGLTWEPRSFSNLDAEEEITYRFQVVSFKDGEGWVLGKPALLLHTKDSGKSWERIPLSPKLPGEPSSILALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVR-DDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTSRRIQNMGFVEGDIHKGLWMTLNGGKVFVSPKDPDLSQDAFEFFEADIKTGGYGVTDVAWRNENEAWAVGGSNTMYVSMDGGKKFNFDKSANNFPG-NLYSVRFFKEYNNMGWALGSNGMLLRY 400

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A7S2S971_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S971_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 2.220e-135
Identity = 204/325 (62.77%), Postives = 251/325 (77.23%), Query Frame = 0

Query:   95 WEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPDANT-DAKFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFGGDKGFALGAEGVLLKY 418
            W  +   V T L+DIAFD   P HG VVGA+GTFLET DGG  W  R+F  LD E+EINYRFQ VS  ++E +++GKP ILLHSKD G +WERV L+PKLPGEP+ IVA+G GKAEMTTSTGAIYYT+NAG N+ AQVKET+DATLNR+SSSGVSGASYF+GSI    R +  GSYLAVSSRGNFYLT+ PG +FW PHNRG SRRIQ+MGF   +  +GLWM+LNGG+++ + +  D N+ + +F    IK+GGYGIIDVAW++ NE WAVGGGG++  S DGGKTFK+ + A ++   NLY+VKFF  D GF LG++GVLL+Y
Sbjct:  133 WTQVDAGVDTTLFDIAFDTADPSHGYVVGARGTFLETVDGGKSWFPRSFTNLDAEDEINYRFQTVSFENNEAWIIGKPAILLHSKDAGKNWERVPLSPKLPGEPNGIVALGPGKAEMTTSTGAIYYTENAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGSISSIER-DSSGSYLAVSSRGNFYLTYRPGDEFWIPHNRGTSRRIQSMGFANEKLEEGLWMSLNGGLLEVSNKNTDLNSQEPEFDPSSIKTGGYGIIDVAWRNKNEVWAVGGGGTMHVSKDGGKTFKFDNSADDIPG-NLYSVKFFK-DTGFVLGSDGVLLRY 454

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A7S3PV43_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV43_9STRA)

HSP 1 Score: 393 bits (1009), Expect = 2.730e-131
Identity = 209/380 (55.00%), Postives = 262/380 (68.95%), Query Frame = 0

Query:   42 ASSCRQLLMGKDGNSESREGFLKDSAAGVVAGAIAVAASTGVVQPASAAAIKAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPDANTDA-KFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFG--GDKGFALGAEGVLLKY 418
            A++   L+   D N E R  F+  S     A ++A   S     PA AAA K W  + +P    +YDI FD   P HG +VGA+G+F ET DGG  W  R+F  LD EEEI YRFQ VS    E +V+GKP +LLH+KD G SWER+ L+PKLPGEP++++A+G  KAEMTTS+GA+Y T+NAG N+ AQV+ET+DATLNRISSSGVSGASYFSGSII   R + DG+Y+AVSSRGNF+LTW PGQDFW PHNRG  RRIQNMGF+ G    GLWMTLNGG +    +  D + DA  F +  IK+GGYG+ DV ++ DNE WAVGG  +++ S DGGK F +   A N +  NLYNVKFF   G+ G+ALG+ G+LL+Y
Sbjct:   27 ATNTATLMSATDDNCEDRRAFVSKSVTAGAAASLATMGSAVNPAPAEAAASKLWSRVAIPFEDTVYDIDFDS--PTHGYLVGARGSFAETNDGGKTWEPRSFSNLDAEEEITYRFQVVSFEGGEGWVLGKPTLLLHTKDAGKSWERIPLSPKLPGEPTSVLALGPSKAEMTTSSGAVYITENAGRNWKAQVQETIDATLNRISSSGVSGASYFSGSIINQHR-DADGAYIAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVNGDIHKGLWMTLNGGKLLINSQDVDLSKDAFDFAEADIKTGGYGLTDVGYRTDNEVWAVGGSNTMYVSFDGGKKFSFDKSA-NDIPGNLYNVKFFKDYGNMGWALGSNGLLLRY 402

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BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Match: A0A7S4WJL8_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4WJL8_9STRA)

HSP 1 Score: 388 bits (997), Expect = 4.520e-129
Identity = 198/334 (59.28%), Postives = 246/334 (73.65%), Query Frame = 0

Query:   88 SAAAIKAWEPIQLPVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEEEINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSNIVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRSADGLWMTLNGGVMQRTLEKPDANTDA-KFTDVPIKSGGYGIIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKFFG--GDKGFALGAEGVLLKY 418
            +AAA K W  + LP    LYDI FD   P HG +VGA+G F ET DGG  W  R+F  LD EEE+ YRFQ VS  D E +V+GKP ++LH+KD G +WER+ L+PKLPGEP++++A+G  KAEMTTS+GA+Y T NAG N+ AQVKET+DATLNRISSSGVSGASYF+GSII   R +DDG+YLAVSSRGNF+LTW PGQDFW PHNRG  RRIQNMGF+ G    GLWMTLNGG +  +   P+ ++D+ +F +  IK+GGYGI DVAW+  NE WAVGG  +++ STD GK F +   A N +  NLYNVKFF    + G+ALG+ G+LL+Y
Sbjct:  103 NAAASKMWTQVSLPFEDTLYDIDFDS--PTHGYLVGARGAFAETNDGGQTWEARSFSNLDAEEEVTYRFQVVSFKDGEGWVLGKPTLMLHTKDAGKTWERIPLSPKLPGEPTSVLALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVR-DDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVEGDIHKGLWMTLNGGKLFVSPTDPNLSSDSFEFNEANIKTGGYGITDVAWRTANEVWAVGGSNTMYVSTDNGKNFSFDKSA-NSIPGNLYNVKFFKEYDNMGWALGSSGLLLRY 432

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig94.71.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KCC9_9PHAE	1.560e-212	73.57	PSII_BNR domain-containing protein n=2 Tax=Ectocar...	[more]
A0A836CNS8_9STRA	3.080e-166	67.75	Photosynthesis system II assembly factor YCF48-dom...	[more]
A0A7S2XVG6_9STRA	9.740e-150	62.84	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S3XNC3_HETAK	5.850e-147	59.64	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7R9U3Z4_9STRA	1.090e-142	57.32	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S2UBA7_9STRA	7.660e-139	56.88	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A7S2SCF7_9STRA	8.520e-137	57.48	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S2S971_9STRA	2.220e-135	62.77	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3PV43_9STRA	2.730e-131	55.00	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S4WJL8_9STRA	4.520e-129	59.28	Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028203	Photosynthesis system II assembly factor Ycf48/Hcf136-like domain	PFAM	PF14870	PSII_BNR	coord: 89..418 e-value: 2.9E-116 score: 388.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 87..404 e-value: 2.2E-9 score: 38.6
None	No IPR available	PANTHER	PTHR47199	PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC	coord: 55..418
None	No IPR available	SUPERFAMILY	110296	Oligoxyloglucan reducing end-specific cellobiohydrolase	coord: 94..419

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig94	contig	A-nodosum_M_contig94:665323..671978 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig94.71.3	mRNA_A-nodosum_M_contig94.71.3	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig94 664524..672151 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig94.71.3 ID=prot_A-nodosum_M_contig94.71.3|Name=mRNA_A-nodosum_M_contig94.71.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=429bp
MASTVVISTCAFIASAGAFVPQAHLPLRASLLCRGSRHQARASSCRQLLM
GKDGNSESREGFLKDSAAGVVAGAIAVAASTGVVQPASAAAIKAWEPIQL
PVSTVLYDIAFDPVHPDHGLVVGAKGTFLETFDGGNKWGVRTFGALDVEE
EINYRFQKVSLYDDEIFVVGKPPILLHSKDNGNSWERVSLNPKLPGEPSN
IVAMGNGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSG
ASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRR
IQNMGFIRGRSADGLWMTLNGGVMQRTLEKPDANTDAKFTDVPIKSGGYG
IIDVAWKDDNEAWAVGGGGSLWYSTDGGKTFKYSSGATNVVATNLYNVKF
FGGDKGFALGAEGVLLKYIPNQLSPQTA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028203	PSII_CF48-like_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf