mRNA_A-nodosum_M_contig94.66.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA) HSP 1 Score: 296 bits (758), Expect = 3.310e-100 Identity = 148/192 (77.08%), Postives = 167/192 (86.98%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL AGGRRVGHK R P S NVYL LLVKL+RFL+RRTDS F KVVLKRLYMS+TNR PLS+SRL R+M++K+E TAVIVGTVTDD RLLEVPK+SVCAL+FTETARARIL +GGEC+T DQLALR PKGS TVLLRGPK RE KHFGHR+T ++ THD VKPYVRSKGRKFE+ARGRR++NGFK+
Sbjct: 1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA) HSP 1 Score: 294 bits (752), Expect = 2.720e-99 Identity = 148/192 (77.08%), Postives = 169/192 (88.02%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL AGGRRVGHKVR +P+SKNVYL LLV+L+RFL+RRTDS F KVVLKRLYMSKTN P+S+SRL RYM+ KE+ TAVIVGTVTDD RLL++P L VCALKFTE ARARIL AGGE +T DQLAL+ PKG+ TVLLRGPK+AREAV+HFGHR+T++++HTH VKPYVRSKGRKFEKARGRR S GFKV
Sbjct: 1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA) HSP 1 Score: 288 bits (736), Expect = 7.430e-97 Identity = 145/192 (75.52%), Postives = 165/192 (85.94%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDLVAGGRRVGHK R AP+S NVYLGLL KL++FL+RRT+S F VLKRLYMSKTNR PL L RL ++M K+ TAV+V TVTDD RLLEVPK++VCAL+FTE+AR+RI+AAGGEC+T DQLAL+ P GSN VLLRGPK+AREA +HFGHRTTV N HTH+ VKPYVRSKGRKFEKARGRR SNGFKV
Sbjct: 1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN) HSP 1 Score: 284 bits (726), Expect = 2.480e-95 Identity = 141/192 (73.44%), Postives = 163/192 (84.90%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGID+VAGGRRVGHK R +S+NVYL LLVKL+RFL+RRTDSAF K VLKRL+MS+TNR PLSLS L R+MR K++ AV+VGT+TDD R+L VPK++VCAL+FTETARARI+ AGGEC+T DQLALR PKGSNTVLLRGPK ARE HFGHR+T ++ TH VKPYVR+KGRKFEKARGRR S GFKV
Sbjct: 1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA) HSP 1 Score: 280 bits (717), Expect = 5.620e-94 Identity = 142/192 (73.96%), Postives = 163/192 (84.90%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL +GGRR GHK R AP+S NVYL LLVKL+RFL+RRTDS F V+LKRL+MSK NR P+++SRLVR+M+ KE TAVIVGT+TDD R+LEVPKLSV ALK T TARARIL AGGE +T D+LALR PKG+N VLLRGP D REA+ HFGHR+TV N+HTHD+VKPY RSKGRKFEKARGRRRS GFK+
Sbjct: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A8D0ZR79_PIG (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8D0ZR79_PIG) HSP 1 Score: 274 bits (701), Expect = 4.480e-92 Identity = 140/157 (89.17%), Postives = 150/157 (95.54%), Query Frame = 1
Query: 106 FLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
FL+RRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVR NKE +TAV+VGTVTDD+RLL VPKLSVCAL+FTETARARILAAGGECIT DQLALR PKG+NTVLLRGPK+AREAV+HFGH+TTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFK+
Sbjct: 2 FLTRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVR---NKETSTAVLVGTVTDDVRLLAVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHKTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKI 155
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A7S2BC13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BC13_9STRA) HSP 1 Score: 273 bits (699), Expect = 4.810e-91 Identity = 144/194 (74.23%), Postives = 161/194 (82.99%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEEN--TAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDLVAGGRRVGHKVR AP S NVYL LLVKL+ FL+RRT S F K V KRL+MSKTN+ P+S+S++ +YM +E TAVIVGTVTDDIRL E+P L VCAL+FTE ARARI+ AGGEC+T DQLAL PKGSN VLLRG + REA+KHFGHR TV NLHTHD+VKPYVRSKGRKFEKARGRRRS GFKV
Sbjct: 12 MGIDLVAGGRRVGHKVRTAPVSDNVYLKLLVKLYAFLARRTGSDFCKTVTKRLFMSKTNKPPISVSKIAKYMTPQEGKGKTAVIVGTVTDDIRLSELPALRVCALRFTEGARARIVKAGGECLTFDQLALEAPKGSNCVLLRGSMN-REALKHFGHRCTVKNLHTHDNVKPYVRSKGRKFEKARGRRRSTGFKV 204
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A1Z5KDV2_FISSO (Large subunit ribosomal protein L18e n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDV2_FISSO) HSP 1 Score: 270 bits (691), Expect = 5.280e-90 Identity = 141/193 (73.06%), Postives = 160/193 (82.90%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVR-KAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL AGGRRVGHK K ++ N Y LL+KL++FLSRRTDS F VLKRL+MSK N+ P+ L+RL R M NK++ TAVIVG VTDD+R+L+ PKLSVCAL FTETAR RI+AAGGECITLDQLALR PKG NTVLLRGPK +R A+ HFGHRTTVNN HTH+ VKPYVRSKGRKFE+ARGRRRS GFKV
Sbjct: 1 MGIDLKAGGRRVGHKSSMKKVKTLNPYNRLLIKLYKFLSRRTDSKFCATVLKRLHMSKVNKPPIGLNRLARCMTNKDDKTAVIVGKVTDDVRMLDCPKLSVCALGFTETARKRIVAAGGECITLDQLALRAPKGKNTVLLRGPK-SRAALAHFGHRTTVNNPHTHNGVKPYVRSKGRKFERARGRRRSRGFKV 192
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A7S2W9J6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9J6_9STRA) HSP 1 Score: 270 bits (691), Expect = 7.170e-90 Identity = 138/192 (71.88%), Postives = 162/192 (84.38%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
MGIDL AGGR+V HK RKAP+S+NVYL LLVKL+ FLSRRTDS F KVVLKRLYMSK N+ P+S+S++ R+M E+ AVIVG VTDD+RL E+PKL VCAL+FT ARARIL AGGEC+T DQLAL P GS TVLLRG K+ REA+KHFGH+T+V + HTHD+VKPY+R+KGRKFE+ARGRRRSNGFKV
Sbjct: 11 MGIDLKAGGRKVHHKERKAPKSQNVYLKLLVKLYSFLSRRTDSKFCKVVLKRLYMSKLNKPPISVSKIARFMGAHEDKIAVIVGPVTDDVRLTELPKLRVCALRFTAGARARILKAGGECLTFDQLALVAPSGSKTVLLRGSKN-REALKHFGHKTSVASPHTHDNVKPYIRAKGRKFERARGRRRSNGFKV 201
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A5D6XV36_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XV36_9STRA) HSP 1 Score: 268 bits (684), Expect = 8.620e-89 Identity = 134/191 (70.16%), Postives = 159/191 (83.25%), Query Frame = 1
Query: 4 GIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 576
GIDL+AGG+ VG K R AP+S+NVYL LLV+L+RFL+RRT+S F +VL+RLY S TN+AP+S+ R+ RYM E AVIVGTVTDDIRLL VPK+SV AL FTETARARI AGGEC++ DQLALR PKG+NTVLLRG + ARE +HFGH++TVN++HTHD VKPYVRSKGRKFE ARGRR+S GFKV
Sbjct: 12 GIDLIAGGKVVGKKNRTAPKSENVYLNLLVRLYRFLARRTNSKFNSIVLRRLYQSNTNQAPMSIGRVARYMTGHEGKLAVIVGTVTDDIRLLNVPKVSVVALAFTETARARITNAGGECLSFDQLALRAPKGANTVLLRGRRTAREVYRHFGHKSTVNSVHTHDHVKPYVRSKGRKFEMARGRRKSRGFKV 202 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig94.66.1 >prot_A-nodosum_M_contig94.66.1 ID=prot_A-nodosum_M_contig94.66.1|Name=mRNA_A-nodosum_M_contig94.66.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=192bp MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLback to top mRNA from alignment at A-nodosum_M_contig94:620873..628775+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig94.66.1 ID=mRNA_A-nodosum_M_contig94.66.1|Name=mRNA_A-nodosum_M_contig94.66.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7903bp|location=Sequence derived from alignment at A-nodosum_M_contig94:620873..628775+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig94:620873..628775+ >mRNA_A-nodosum_M_contig94.66.1 ID=mRNA_A-nodosum_M_contig94.66.1|Name=mRNA_A-nodosum_M_contig94.66.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=576bp|location=Sequence derived from alignment at A-nodosum_M_contig94:620873..628775+ (Ascophyllum nodosum dioecious)back to top |