mRNA_A-nodosum_M_contig938.3.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: D7G718_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G718_ECTSI) HSP 1 Score: 283 bits (723), Expect = 2.610e-89 Identity = 135/199 (67.84%), Postives = 164/199 (82.41%), Query Frame = 1
Query: 313 HYQIRKVLEFKPEDPNRSWQVPRASASTPGLD-KHEFRSPAPNSQPQANVPNSDNPDLLYDITYYKRDTRRSAPREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 906
H +IR VLEFKP+DPNR WQVP A A+TPGL K+E+R+PAPNSQPQANVP SDNPDL YDI Y+KRDTRR APR+I++Y+AP+ R LADER KA LEL++ ++GP++ P PSQG K PAV+KYDPTGLR+TM+ +N+ W +SLKEYMP HNVKPWWWH+DVD VA+A+ KGLPPPPG+RM WEAP + VASW
Sbjct: 18 HEKIRNVLEFKPKDPNRGWQVPPAKAATPGLKAKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYFKRDTRR-APRQIHSYVAPSLRMLADERVKA-----LELISNELGPED--PAPSQGNKNPAVLKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKSSKVASW 208
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: W7TSB3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSB3_9STRA) HSP 1 Score: 135 bits (339), Expect = 5.540e-33 Identity = 77/196 (39.29%), Postives = 108/196 (55.10%), Query Frame = 1
Query: 322 IRKVLEFKPEDPNRSWQVPRASASTPGLDKHE-FRSPAPNSQPQANVPNSDNPDLLYDITYYKRDTRRSAPREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 906
IR F+P+D N + PR S PG+++ + +R PAP S+P+ NVP S++ D LYDI Y+ DTRR P E++++ P + +A P+ + S G K PAV+ YDPTGLR+ M+ +N+E EK+L MPNHNV+ W + IV E KGLP PPGKR ++ P A W
Sbjct: 33 IRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRR-PAEVFSW-----------------SPDFKRVALPDSPEPAKLMGSPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: A0A835YW15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW15_9STRA) HSP 1 Score: 100 bits (250), Expect = 9.590e-21 Identity = 72/195 (36.92%), Postives = 104/195 (53.33%), Query Frame = 1
Query: 331 VLEFKPEDPNRSWQVPRASASTPGLDKH-EFRSPAPNSQPQANVPNSDNP-DLLYDITYYKRDTRRSAPREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEP-SQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 906
VL F+P+ QVP A+ PG+ + +R PAP S+ NVP D P D YDIT Y RD R P + ++ P R KA L+ ++ P +G E +P+ S G K PAV++YDPTGLR+TM+ + E +KSL+ + P+H + W ++ +AEE GLPPP G+ ++ A W
Sbjct: 26 VLSFRPK-VLEMLQVPPANMRIPGVPRILGYRYPAPASREAPNVP--DMPADRHYDITRYPRDNRNIKPDNV-VFMPP--------RVKAYLETGSDVTHPLLGAGEPQPKKGSPGNKNPAVLRYDPTGLRSTMSATWAETDKSLELHRPHHLPRAEWVEDYDKMLKKAEENGLPPPIGRPLRMRYQRIIRTAHW 208
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: A0A2R5G086_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G086_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 9.260e-20 Identity = 64/188 (34.04%), Postives = 93/188 (49.47%), Query Frame = 1
Query: 322 IRKVLEFKPEDPNRSWQVPRASASTPGLDKHEFRSPAPNSQPQ-ANVPNSDNPDLLYDITYYKRDTRRSAPREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEKGLPPPPGKRMQWEAP 882
+ KV EF PNRS + + K +R P+P +Q Q A P +N + YD YY RDT R+ +Y + D A +L P+ G + R S G K PAV++YDP+G R+ M ++ + + LKE +P H W ++D+VA+A+ KG+PPPPGK W P
Sbjct: 34 VDKVKEFFMFAPNRSSYETFPDSKKSKIGKG-YRYPSPGTQSQGAFTPIKENDEDPYDTNYYTRDTARNMQEPLYIHN----------------DKAAQLHLPKAGEEPPR-SGSPGNKNPAVLRYDPSGTRSAMASTWEGLDSKLKENLPIHLPMAWSEWENIDVVAEAKAKGIPPPPGKPAPWTGP 203
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: D0NT33_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0NT33_PHYIT) HSP 1 Score: 90.5 bits (223), Expect = 3.230e-17 Identity = 62/199 (31.16%), Postives = 103/199 (51.76%), Query Frame = 1
Query: 322 IRKVLEFKPEDPNRSWQVPRASASTPGLDKHEFRSPAPNSQPQA-NVPNSDNPDLLYDITYYKRDTRRSA-PREIYTYIAPAHRQLADERAKASLDPALEL-LAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVK-PWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 906
+RK+L F + + QV ++ A + G +R P+P+ Q + +VP+SD+ D +Y+I YY RD RR P E+ + P++ + ++ D R P G K PAV++YDPTG R+ M+T+++ +K + ++ HNV+ W A+ +I+ E K LPP PG+ W+ P + V W
Sbjct: 27 LRKMLVFT--EATGTKQVHQSPAVSQG-----YRYPSPDKQAEGVSVPSSDSKDSIYNIQYYTRDIRRFPFPTEV------------------GMHPSIPMEKRAEIPADAKRGSP--GNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKEILEDLEAKNLPPTPGRPFVWDFPAQSRVMRW 198
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: A0A225X2X0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2X0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.990e-17 Identity = 60/198 (30.30%), Postives = 102/198 (51.52%), Query Frame = 1
Query: 322 IRKVLEFKPEDPNRSWQVPRASASTPGLDKHEFRSPAPNSQPQAN-VPNSDNPDLLYDITYYKRDTRRSA-PREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVK-PWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 906
+RK+L F + + QV ++ A + G +R P+P+ Q + VP++++ D +Y+I YY RD RR P E+ + P++ + P P + + S G K PAV++YDPTG R+ M+T+++ +K + ++ HNV+ W A+ +I+ E K LPP PG+ W+ P + V W
Sbjct: 27 LRKMLVFT--EATGTKQVNQSPAVSQG-----YRYPSPDKQAEGVFVPSNESKDSVYNIQYYTRDIRRFPFPTEV------------------GMHPSIPVETPAEIPADAK-RGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLIMQHASTHNVRFEWEGEAEKEILEDLEAKSLPPTPGRPFVWDFPAQSRVMRW 198
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: W2QS79_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QS79_PHYPN) HSP 1 Score: 90.1 bits (222), Expect = 1.600e-16 Identity = 63/198 (31.82%), Postives = 102/198 (51.52%), Query Frame = 1
Query: 322 IRKVLEFKPEDPNRSWQVPRASASTPGLDKHEFRSPAPNSQPQA-NVPNSDNPDLLYDITYYKRDTRRSA-PREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVK-PWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 906
+RK+L F + + QV ++ A + G +R P+P+ Q + +VP+SD+ + +Y+I YY RD RR P E+ H + E+ ++ D R P G K PAV++YDPTG R+ M+T+++ +K + ++ HNV+ W A+ DI+ E K LPP PG+ W+ P + V W
Sbjct: 89 LRKMLVFT--EATGTKQVNQSPAVSQG-----YRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEV-----GMHPSIPVEKRA------------EIPADAKRGSP--GNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: A0A0W8CKY2_PHYNI (Fibronectin type-III domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CKY2_PHYNI) HSP 1 Score: 86.7 bits (213), Expect = 3.250e-14 Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 1
Query: 322 IRKVLEFKPEDPNRSWQVPRASASTPGLDKHEFRSPAPNSQPQA-NVPNSDNPDLLYDITYYKRDTRRSA-PREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVK-PWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANV 897
+RK+L F + + QV ++ A + G +R P+P+ Q + +VP+SD+ + +Y+I YY RD RR P E+ H + E+ ++ D R P G K PAV++YDPTG R+ M+T+++ +K + ++ HNV+ W A+ DI+ E K LPP PG+ W+ P + V
Sbjct: 27 LRKMLVFT--EATGTKQVNQSPAVSQG-----YRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEV-----GMHPSIPVEKRA------------EIPADAKRGSP--GNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRV 195
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: A0A421F137_9STRA (Fibronectin type-III domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F137_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.310e-13 Identity = 60/197 (30.46%), Postives = 96/197 (48.73%), Query Frame = 1
Query: 322 IRKVLEFKPEDPNRSWQVPRASASTPGLDKHEFRSPAPNSQPQAN-VPNSDNPDLLYDITYYKRDTRRSAPREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVK-PWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 906
+RK+L F + + QV ++ A + G +R P+P+ Q + VP+SD D +Y+ YY RD RR + H + E+ ++ D R P G K PAV++YDPTG R+ M+T+++ +K + ++ HNV+ W A+ +I+ E K LPP PG+ W P + V W
Sbjct: 27 LRKMLVFT--EATGTKQVNQSPAVSQG-----YRYPSPDKQAEGVFVPSSDTKDSVYNTQYYTRDIRRMR----FPIEVGVHPSIPVEKRA------------EIPADAKRGSP--GNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFHWEGDAEKEIMDDTEAKDLPPVPGRPFVWNLPAQSRVMRW 198
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: H3GYT6_PHYRM (Fibronectin type-III domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYT6_PHYRM) HSP 1 Score: 84.7 bits (208), Expect = 1.340e-13 Identity = 60/195 (30.77%), Postives = 100/195 (51.28%), Query Frame = 1
Query: 322 IRKVLEFKPEDPNRSWQVPRASASTPGLDKHEFRSPAPNSQPQAN-VPNSDNPDLLYDITYYKRDTRRSA-PREIYTYIAPAHRQLADERAKASLDPALELLAPQVGPDETRPEPSQGRKIPAVMKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVK-PWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANV 897
+RK+L F + + QV ++ A + G +R P+P+ Q + VP+SD+ D +Y+ +YY RD RR P E+ + + ++ A+ A A S G K PAV++YDPTG R+ M+T+++ +K + ++ HNV+ W A+ +I+ E K LPP PG+ W+ P + V
Sbjct: 27 LRKMLVFT--EATGTKQVNQSPAVSQG-----YRYPSPDKQAEGVFVPSSDSKDSVYNTSYYTRDIRRFPFPTEVGVHPSIPVQKRAEIPADAKRG-------------------SPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEQEIIDDMEAKNLPPMPGRPFVWDLPAQSRV 195 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig938.3.1 >prot_A-nodosum_M_contig938.3.1 ID=prot_A-nodosum_M_contig938.3.1|Name=mRNA_A-nodosum_M_contig938.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=74bp MKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEKback to top mRNA from alignment at A-nodosum_M_contig938:4657..8581+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig938.3.1 ID=mRNA_A-nodosum_M_contig938.3.1|Name=mRNA_A-nodosum_M_contig938.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3925bp|location=Sequence derived from alignment at A-nodosum_M_contig938:4657..8581+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig938:4657..8581+ >mRNA_A-nodosum_M_contig938.3.1 ID=mRNA_A-nodosum_M_contig938.3.1|Name=mRNA_A-nodosum_M_contig938.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=222bp|location=Sequence derived from alignment at A-nodosum_M_contig938:4657..8581+ (Ascophyllum nodosum dioecious)back to top |