prot_A-nodosum_M_contig937.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig937.3.1
Unique Nameprot_A-nodosum_M_contig937.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length284
Homology
BLAST of mRNA_A-nodosum_M_contig937.3.1 vs. uniprot
Match: D7G4Y2_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y2_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 9.740e-56
Identity = 114/192 (59.38%), Postives = 130/192 (67.71%), Query Frame = 0
Query:    1 MAACLAIAYKFNEPVLMEGASKLPALWAFVDHEWQVSKKRVLEAEFGVLVKLCFDLHEDPRDIFHHFALLLKMVDSNASLYLGEDMMKLHHEALETF-REGGNDEVSATGGXXXGADK-----GSESPRIRSGSNALT--GDVRVDAVG-------SQGFSFMETSGWLQRRRAGSGSRWLAGWRGAIPEEN 177
            MAACLAIAYKFNE VL EG SKLPALWAF+D EWQVSKKRVLEAEFGVLV+L FDLHEDPRDIFHHF LLLKMV+SNA+LYLGE+MM LH E+LETF REG N++ + T              G +SP    G   ++  G    DA G        Q + F+ET  WLQRR     +RWLAGWR    +EN
Sbjct:  223 MAACLAIAYKFNEAVL-EGVSKLPALWAFIDQEWQVSKKRVLEAEFGVLVQLSFDLHEDPRDIFHHFVLLLKMVESNATLYLGEEMMGLHQESLETFFREGTNEDGARTVSGAAATXXXXXXXGQDSP---GGGRPVSDSGAAGADAAGRPRVHDSQQRYPFLETPAWLQRRPTNR-TRWLAGWRAGFAQEN 409          
BLAST of mRNA_A-nodosum_M_contig937.3.1 vs. uniprot
Match: A0A6H5JD09_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD09_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 5.690e-53
Identity = 113/195 (57.95%), Postives = 129/195 (66.15%), Query Frame = 0
Query:    1 MAACLAIAYKFNEPVLMEGASKLPALWAFVDHEWQVSKKRVLEAEFGVLVKLCFDLHEDPRDIFHHFALLLKMVDSNASLYLGEDMMKLHHEALETF-REGGNDE-------VSATGGXXXGADKGSESPRIRSGSNALTGDVRVDAVG------SQGFSFMETSGWLQRRRAGSGSRWLAGWRGAIPEENTAAG 181
            MAACLAIAYKFNE +L EG SKLPALWAF+D EWQVSKKRVLEAEFGVLV+L FDLHEDPRDIFHHF LLLKMV+SNA+LYLGE+MM LH E+LETF REG N++        +A      G D+ S         N   G    DA G      SQ   F+ET  WLQRR     +RWLAGWR    +++   G
Sbjct:  668 MAACLAIAYKFNEAML-EGVSKLPALWAFIDQEWQVSKKRVLEAEFGVLVQLSFDLHEDPRDIFHHFVLLLKMVESNATLYLGEEMMGLHQESLETFFREGTNEDGARTVSGATAAAAATAGVDQDSPGGGRPVSDNGAAG---ADAAGRPRVHTSQRSPFLETPAWLQRRPTNR-TRWLAGWRAGFAQDDPGTG 857          
BLAST of mRNA_A-nodosum_M_contig937.3.1 vs. uniprot
Match: A0A835YPH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 9.740e-26
Identity = 56/93 (60.22%), Postives = 71/93 (76.34%), Query Frame = 0
Query:   10 KFNEPVLMEGA-SKLPALWAFVDHEWQVSKKRVLEAEFGVLVKLCFDLHEDPRDIFHHFALLLKMVDSNASLYLGEDMMKLHHEALETFREGG 101
            +FNEP+ + G  SKLP LW+F+D EWQVSKK+VLEAEFGVLV+L F LHEDPR + +HF  LLKMV++NA  YLGE M+ +H  A+  F + G
Sbjct:  764 QFNEPLSISGYNSKLPGLWSFIDSEWQVSKKQVLEAEFGVLVQLGFCLHEDPRHVSYHFTRLLKMVETNAREYLGESMLGMHQRAVAMFSDDG 856          
BLAST of mRNA_A-nodosum_M_contig937.3.1 vs. uniprot
Match: A0A7S2RWQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWQ1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.510e-11
Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 0
Query:    1 MAACLAIAYKFNEPVLMEGASKLPALWAFVDHEWQVSKKRVLEAEFGVLVKLCFDLHEDPRDIFHHFALLLK--MVDSNASLYLGEDMMKLHHEALETFREG 100
            MAACL +AYKFNEP +     KL  L    D EW +   +V  AE GVLV+L F LH     + HHF  LLK  +V+ +A  YLGE++      ALE  + G
Sbjct:  435 MAACLLVAYKFNEPHVGTDP-KLGMLVELFDQEWSIQASQVHNAELGVLVELGFSLHAASEHVLHHFNRLLKSPLVNCSAREYLGEELHDTFLRALEDHQAG 535          
BLAST of mRNA_A-nodosum_M_contig937.3.1 vs. uniprot
Match: A0A4D9D598_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D598_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.200e-10
Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 0
Query:   18 EGASKLPALWAFVDHEWQVSKKRVLEAEFGVLVKLCFDLHEDPRDIFHHFALLLKMVDSNASLYLGEDMMKLHHEALETFREGGN-----DEVSATGGXXXGADKGSESPRIRSGSNALTGDVRVDAVGSQGFSF 147
            + + KL  L  ++D EW VSKK+VLEAEFGV + L F LH    ++ HHFA L K+V +    YLGED  + + E +    +  +     DEV+ T     G   G E        NA   D   +AV  + +++
Sbjct:  355 KNSCKLSRLLEWIDREWCVSKKQVLEAEFGVCINLKFALHVPACEVQHHFARLCKLVGATPRDYLGEDRFRAYTEVVTGHNKHSHPRRQEDEVTGTTRRRVGGGNGREK-------NANANDGCWNAVAEKRYTY 482          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig937.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4Y2_ECTSI9.740e-5659.38Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6H5JD09_9PHAE5.690e-5357.95Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YPH7_9STRA9.740e-2660.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RWQ1_9STRA1.510e-1144.12Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D598_9STRA2.200e-1034.81Cyclin N-terminal domain-containing protein n=2 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..283
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig937contigA-nodosum_M_contig937:102071..116744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig937.3.1mRNA_A-nodosum_M_contig937.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig937 101520..123933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig937.3.1 ID=prot_A-nodosum_M_contig937.3.1|Name=mRNA_A-nodosum_M_contig937.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=284bp
MAACLAIAYKFNEPVLMEGASKLPALWAFVDHEWQVSKKRVLEAEFGVLV
KLCFDLHEDPRDIFHHFALLLKMVDSNASLYLGEDMMKLHHEALETFREG
GNDEVSATGGGGGGADKGSESPRIRSGSNALTGDVRVDAVGSQGFSFMET
SGWLQRRRAGSGSRWLAGWRGAIPEENTAAGGTASTALQTASSVIDTRQT
SGKARSTFTVGKEPTEEQTKKRGRAVATNAVGSSSGGWRRAEGGSSSGSI
GKSSTPSFLARVSSRRPHTARSSIQPERALDSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf