prot_A-nodosum_M_contig932.13.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig932.13.2
Unique Nameprot_A-nodosum_M_contig932.13.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1208
Homology
BLAST of mRNA_A-nodosum_M_contig932.13.2 vs. uniprot
Match: A0A6H5K7H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7H2_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 1.460e-160
Identity = 437/953 (45.86%), Postives = 501/953 (52.57%), Query Frame = 0
Query:   58 VHPDCALEFSDKFVRRDIALAGRVQAVRLLRGSTNTVFSVVVRRGGFRALYGWLGDVWERVRAHKLPRTGPPDWRSVGGRLYVEDLLGVLGRVPISVDMLRETEIARVAKKFRRLAERHGIESMIAASNRLRAHLHAVVSRGVQEGLFFRNRVVGRSRAAGPGDHQRD------VLPSKHSVPYPDRRPRPWNSKNVLSWSASGGVAGGTGGFVGYGG-TRGRASGAFIENNEGASLADRQEASSN--GDYRGGGGAVVAGSTAPYHHPHHPRYLSRFRIEYPVPALRSARLRGWR-------------------------------------------------------------------RGQSDEGDVPRAGNGKS------------GGYPRG--------------GAGRVLV------------------SKTEPWAFDLSHSPGEEERRGRLAQQGSQRHTSWEGGRRQQRRAGGGV-DERWMRLQGVQQSDRGGGGRVFFP-WREEILSSASGKRASSTSLRTYGMEYPPEEGSWEGRLDWWRRPLSPLLSDGRNAYYSAGDVPGGASGGSSSASGQLGLGSQLPTVPTFEESGTRVSWADYRGHRLAEVHEIEPCYSREDFALPGHVGWVAETSRRDMSKKEEQLLSPEDHERLAAATRESDALRERVYGGGTGGGGDSEGTISDSENSTTGDPDAEFQNRGGGDTVGRDDGVDEERIIGESVVKTTTAKT---PEDSSNAPASSGGCRDVDNSSEGGIVGGARTCPGSGLTGHPQAGSRGGNLDDIPACRRQQNSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDSKHGAGGRESGGSESGSSSLHSPQRFFSLTEDETSPPVSPLGI------PTRRFTSPTGQRSPPGSPTVSSPGSSRSGSVADGN----EGEGGSTRRRDVVPCPTVARSTW 875
            VHPDCA EF+++FVRRDIALAGRVQAVRLL  STN++FSVVVR GGFRALYGWLGDVWERVRAHKL R GPP W+ VGGRLYVE LL VL RVPISVDMLRETEIARVAKKFRRLAERHG+ESM  ASN+LRAHLHAVVSRGVQEGLFFRNR  G + AAGP D+ R         PS  S+PYP RRP PWNSK   SW A+G V GGT GF  YGG TRGRA   +     G         S    GD RG GG    G+ +  +H   P   S   +    P LRS +L+GWR                                                                   +G+  +G+      G S            GG P                GAGR +V                  SKTEPW  DLS+S  E+E+R R A++ +    +  GG RQ +    GV   RW           GG  R+F P +REE    +  +   S +          E+GSWEG  DWW RP SP  +   + YY++GD   G     +S  G  G  S LP VPTFEESGTRVSWAD+RGH LAEVHEIEP YSR DFALPGHVG++ E  RRDMSKKEEQLLS EDHERLAAA  ESD LR R YG G GG  DSEGTISDSENSTTGD D  +Q+                                  P    N+        D D++SE  +   AR+       G  +A  R     + P    + NS +         XXXXXXXXXXXXXXXXXXXXXXX                   SS+HSPQR FS  E       SPLG       P RRFTSP+G+RSPP SP+VSSPGSSRSGSVADG+     GE      RD V  P +A + W
Sbjct:  362 VHPDCAFEFAERFVRRDIALAGRVQAVRLLYFSTNSIFSVVVRCGGFRALYGWLGDVWERVRAHKLARAGPPQWKGVGGRLYVEGLLCVLARVPISVDMLRETEIARVAKKFRRLAERHGLESMTKASNQLRAHLHAVVSRGVQEGLFFRNR--GSAAAAGPADYGRGGPLSQFQHPSGASMPYPVRRPEPWNSKEGESWRANGKV-GGTVGFREYGGPTRGRA---YAPGWRGGGRXXXXXXSGQLAGDPRGAGG----GNDSMSNHFDPPLPFSGMNLGN-RPGLRSVQLKGWRCRQGGGDDTSSRXXXXDAGSVRGEDDARASDEGKRSASNHSGSADGSPTREGARGELAGEGAGHQMKKGEKGQGEAQHGNGGNSRSNSNPAAAGALGGSPEPSSVPARRSGNRSAPGAGRAVVGTSGGRKGHPRRSSWRRASKTEPWVLDLSNSGREDEQR-RAARKHNSPQRAGYGGSRQGKSGDEGVGSSRW----------HGGENRMFRPLYREEAGRFSDFRHHPSNAS---------EDGSWEGTGDWWPRPRSPPPAGAADTYYASGDYDSGMY--MNSFPGPQGASSLLPAVPTFEESGTRVSWADHRGHNLAEVHEIEPGYSRGDFALPGHVGFITEACRRDMSKKEEQLLSLEDHERLAAAALESDVLRGRGYGSGAGG--DSEGTISDSENSTTGDLDGGYQSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLP----NSXXXXXXXXDGDDASETAV---ARSEDDKRKEGDARAKERSSLQQNGPRTSLKNNSGAPNNLSDSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------CSSIHSPQRCFSPMEGG-----SPLGAQSSAMAPQRRFTSPSGRRSPPRSPSVSSPGSSRSGSVADGHVMFESGESSDQSHRDTVCRPPLAHNPW 1259          
BLAST of mRNA_A-nodosum_M_contig932.13.2 vs. uniprot
Match: D8LTI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI8_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 6.390e-61
Identity = 200/411 (48.66%), Postives = 224/411 (54.50%), Query Frame = 0
Query:  475 EEGSWEGRLDWWRRPLSPLLSDGRNAYYSAGDVPGGASGGSSSASGQLGLGSQLPTVPTFEESGTRVSWADYRGHRLAEVHEIEPCYSREDFALPGHVGWVAETSRRDMSKKEEQLLSPEDHERLAAATRESDALRERVYGGGTGGGGDSEGTISDSENSTTGDPDAEFQNRGGGDTVGRDDGVDEERIIGESVVKTTTAKTPEDSSNAPASSGGCRDVDNSSEGGIVGGARTCPGSGLTGHPQAGSRGGNLDDIPACRRQQNSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDSKHGAGGRESGGSESGSSSLHSPQRFFSLTEDETSPPVSPLGI------PTRRFTSPTGQRSPPGSPTVSSPGSSRSGSVADGN----EGEGGSTRRRDVVPCPTVARSTW 875
            E+GSWEG  DWW RP SP  +   + YY++GD   G     +S  G  G  S LP VPTFEESGTRVSWAD+RGH LAEVHEIEP YSR DFALPGHVG++ E  RRDMSKKEEQLLS EDHERLAAA  ESD LR R YG G GG  DSEGTISDSENSTTGD D  +Q+                                                D++SE    G      G    G  +A  R     + P    + NS +         XXXXXXXXXXXXXXXXXXXXXXX                   SS+HSPQR FS  ED      SPLG       P RRFTSP+G+RSPP SP+VSSPGSSRSGSVADG+     GE       D V  P +A + W
Sbjct:   25 EDGSWEGTGDWWPRPRSPPPAGAADTYYASGDYDSGMY--MNSFPGPQGASSLLPAVPTFEESGTRVSWADHRGHNLAEVHEIEPGYSRGDFALPGHVGFITEACRRDMSKKEEQLLSLEDHERLAAAALESDVLRGRGYGSGAGG--DSEGTISDSENSTTGDLDGGYQSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDASETAXAGSE---DGKRKEGDARAKERSNPQQNGPRTSLKNNSGAPNNLSDSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------CSSIHSPQRCFSPMEDS-----SPLGAQSSTMAPQRRFTSPSGRRSPPRSPSVSSPGSSRSGSVADGHVMFESGESSDQSHGDTVCRPPLAHNPW 415          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig932.13.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7H2_9PHAE1.460e-16045.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTI8_ECTSI6.390e-6148.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 624..641
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 918..935
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1075..1092
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1106..1130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1176..1199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 731..774
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 819..849
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1031..1064
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 785..809
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 669..693
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 990..1013
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 594..611
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 918..1013
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 594..897
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1029..1207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 872..897

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig932contigA-nodosum_M_contig932:124072..131079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig932.13.2mRNA_A-nodosum_M_contig932.13.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig932 124049..132449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig932.13.2 ID=prot_A-nodosum_M_contig932.13.2|Name=mRNA_A-nodosum_M_contig932.13.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1208bp
MAVAAAGGVPGGAGEASNAGGRAGAKAGEVGAKAGSEAEAVAASAAAAAL
GEGDGWRVHPDCALEFSDKFVRRDIALAGRVQAVRLLRGSTNTVFSVVVR
RGGFRALYGWLGDVWERVRAHKLPRTGPPDWRSVGGRLYVEDLLGVLGRV
PISVDMLRETEIARVAKKFRRLAERHGIESMIAASNRLRAHLHAVVSRGV
QEGLFFRNRVVGRSRAAGPGDHQRDVLPSKHSVPYPDRRPRPWNSKNVLS
WSASGGVAGGTGGFVGYGGTRGRASGAFIENNEGASLADRQEASSNGDYR
GGGGAVVAGSTAPYHHPHHPRYLSRFRIEYPVPALRSARLRGWRRGQSDE
GDVPRAGNGKSGGYPRGGAGRVLVSKTEPWAFDLSHSPGEEERRGRLAQQ
GSQRHTSWEGGRRQQRRAGGGVDERWMRLQGVQQSDRGGGGRVFFPWREE
ILSSASGKRASSTSLRTYGMEYPPEEGSWEGRLDWWRRPLSPLLSDGRNA
YYSAGDVPGGASGGSSSASGQLGLGSQLPTVPTFEESGTRVSWADYRGHR
LAEVHEIEPCYSREDFALPGHVGWVAETSRRDMSKKEEQLLSPEDHERLA
AATRESDALRERVYGGGTGGGGDSEGTISDSENSTTGDPDAEFQNRGGGD
TVGRDDGVDEERIIGESVVKTTTAKTPEDSSNAPASSGGCRDVDNSSEGG
IVGGARTCPGSGLTGHPQAGSRGGNLDDIPACRRQQNSPSNSPQNSPQSS
PQMSPQNSSSQNSSQSSPQNSPIDSKHGAGGRESGGSESGSSSLHSPQRF
FSLTEDETSPPVSPLGIPTRRFTSPTGQRSPPGSPTVSSPGSSRSGSVAD
GNEGEGGSTRRRDVVPCPTVARSTWEQLSRTAHPCSPRESSSALSSRWKV
APVEARFTAGQRPNGIIRFDVRTEDGADAQDSRRSTSRDTVSGSAGPRGR
DGVGGDASGGALMSLPWKARRDALWKKGGRGGEGGRGGGEVVERFGEDNV
RAESLSLENDEEEHREELIGSRARAAILLRVNRTNASNATKSGSSSSSSG
GGVGSKTRKALSSPCTSAGGAEGRVACGRKRDRRERARTGRSTGRSIDNG
GGEGGGSESGTGSSSGGGKNRLTDATASSDGNLIVGKEPSAPWSGSWTAG
APLRRGDSDGVSSAVCAGSSPDNSRQRASARRRIDDHGGGRKEEESCPGE
GLGYGRV*
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