prot_A-nodosum_M_contig931.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig931.3.1
Unique Nameprot_A-nodosum_M_contig931.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length82
Homology
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 3.270e-7
Identity = 28/74 (37.84%), Postives = 39/74 (52.70%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+D+LWAEAM++ACE  N    ++    +SPYE+W    P      PF    Y R  +P   L P+G  C  +G
Sbjct:  226 KTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVG 297          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A4Y2V589_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2V589_ARAVE)

HSP 1 Score: 54.3 bits (129), Expect = 1.170e-6
Identity = 29/74 (39.19%), Postives = 39/74 (52.70%), Query Frame = 0
Query:    9 LWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLGIDTI 82
            +WAEA+N A  +SNRY T +L  G +PYEL+    P   +   FG   Y    KP H  + R  K I +G+  I
Sbjct:   62 MWAEAVNTANYLSNRYPTKALS-GKTPYELFNEIVPNVSYFKTFGCTAYCLDNKPSHKFSARSKKGIFVGLTLI 134          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.650e-6
Identity = 28/74 (37.84%), Postives = 39/74 (52.70%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+D+LWAEAM++ACE  N    ++    +SPYE+W    P      PF    Y R  +P   L P+G  C  +G
Sbjct:  446 KTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 517          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.690e-6
Identity = 28/74 (37.84%), Postives = 39/74 (52.70%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+D+LWAEAM++ACE  N    ++    +SPYE+W    P      PF    Y R  +P   L P+G  C  +G
Sbjct:  112 KTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 183          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.710e-6
Identity = 28/74 (37.84%), Postives = 39/74 (52.70%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+D+LWAEAM++ACE  N    ++    +SPYE+W    P      PF    Y R  +P   L P+G  C  +G
Sbjct:  379 KTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 450          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 3.200e-6
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+D+LWAEAM++ACE  N    ++     SPYE+W    P      PF    Y R  +P   L P+G  C  +G
Sbjct:  858 KTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVG 929          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 3.200e-6
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+D+LWAEAM++ACE  N    ++     SPYE+W    P      PF    Y R  +P   L P+G  C  +G
Sbjct:  565 KTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVG 636          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5KWE4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE4_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 3.640e-6
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+DRLWAEAM++ACE  N    ++     SPYE+W     +     PF    Y R  +P   L P+G  C  +G
Sbjct:  112 KTDRLWAEAMHWACEAINHTACSANPDSKSPYEMW-HGEASHARPYPFLKPAYCRWQRPS-KLLPKGEACFYVG 183          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 4.320e-6
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+DRLWAEAM++ACE  N    ++     SPYE+W     +     PF    Y R  +P   L P+G  C  +G
Sbjct:  764 KTDRLWAEAMHWACEAINHTACSANPDSKSPYEMW-HGEASHARPYPFLKPAYCRWQRPS-KLLPKGEACFYVG 835          
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 8.070e-6
Identity = 27/74 (36.49%), Postives = 38/74 (51.35%), Query Frame = 0
Query:    5 KSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLIPFGAVGYLRRPKPEHNLAPRGAKCIMLG 78
            K+D+LWAEAM++ACE  N    ++    + PYE+W    P      PF    Y R  +P   L P+G  C  +G
Sbjct:  324 KTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 395          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig931.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KVR5_9PHAE3.270e-737.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y2V589_ARAVE1.170e-639.19Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JV76_9PHAE1.650e-637.84Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KKK1_9PHAE1.690e-637.84Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE1.710e-637.84Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JBA7_9PHAE3.200e-637.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE3.200e-637.84Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWE4_9PHAE3.640e-637.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE4.320e-637.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3Y0_9PHAE8.070e-636.49Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig931contigA-nodosum_M_contig931:185997..186242 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig931.3.1mRNA_A-nodosum_M_contig931.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig931 185997..186587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig931.3.1 ID=prot_A-nodosum_M_contig931.3.1|Name=mRNA_A-nodosum_M_contig931.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=82bp
MTAGKSDRLWAEAMNYACEMSNRYTTTSLKPGVSPYELWVRHRPTFGHLI
PFGAVGYLRRPKPEHNLAPRGAKCIMLGIDTI
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