prot_A-nodosum_M_contig93.42.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig93.42.2
Unique Nameprot_A-nodosum_M_contig93.42.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length701
Homology
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: D7FJ93_ECTSI (Signal recognition particle subunit SRP72 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ93_ECTSI)

HSP 1 Score: 844 bits (2180), Expect = 3.990e-300
Identity = 470/704 (66.76%), Postives = 561/704 (79.69%), Query Frame = 0
Query:    1 MDADGMEESVLTPSQKVWRRVQECLRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREG--GRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKRFPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGID-AISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLELGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKKRNKFVGAQGSGDGAAKDAAKLDAHAKAQSRRDMPEKI-VLPPGIVIGKRAGKRR 700
            M+ DG+ E V+T SQ+VWR V+ CL+NEDFDKA+QLCN+VRSKSPDD+DAIRVKCLCLI+QD Y+KALQS SGK KA+LSPERAYC+FRLGRLEEAL+V+R G  G S  GD++R  ALRHLEAQALYRLG H +AAE+Y  +   EDE+R     GFP VSVN+AAAYA AG   +AL    VE+ MEEEGA WELLYNLGTAL+QR G  G      +   AE+CL+QAEE C E   A+  ++ +AADEAS+V SQLAYA + AGK AAA E+L Q+VRSRPSD AV+LVST NLA LGG+KD QEALKRL +AMSE +E+GLL KQLEACRFNKCLLLLQCGKTEEC++EL AVR  YP+SDL PRIEAALLSK+GK  EAS+VL+A L + +  GS  +V SL+LC+AQL A+  DL  AAETLEG+  A+SGTPAA++ALA LY+ MG  EKA  VV  A EAA RG+H LEG+ +A+ALLGMADW   +G + +AA+TY K+L LG ELDG+ R+QAQA+LVIAYSYFDS KSEEEASKLPYN D GS E +DP+ LEMTELP SS+ +KLVLVDKASQ+ ERR+  ++D EA+L++RA     YIAKL+ +G+IDP KPVPKPDPERWIPRSHR+YGKRG+KRNKFVGAQGSGDGAAKD AKLDA A+AQ+++   EK  VLPPG+ IGKR GKRR
Sbjct:    1 MEVDGVAEVVVTESQRVWREVRACLQNEDFDKAVQLCNTVRSKSPDDIDAIRVKCLCLIHQDKYDKALQSASGKHKAVLSPERAYCLFRLGRLEEALEVSRAGESGVSGGGDSKRARALRHLEAQALYRLGRHGEAAEVYCSI--AEDEERRTGGGGFPPVSVNVAAAYAGAGCGEKALGALSVEEAMEEEGAPWELLYNLGTALVQRRGGAGD-----DTAAAESCLQQAEEACRESLVALGHSDAEAADEASMVRSQLAYAASRAGKTAAAAEQLNQVVRSRPSDPAVSLVSTANLAALGGYKDQQEALKRLKAAMSEKSEKGLLSKQLEACRFNKCLLLLQCGKTEECRDELEAVRSAYPNSDLGPRIEAALLSKRGKGGEASSVLKAHLAKAKP-GSKEEV-SLKLCVAQLYATENDLTLAAETLEGVGGAVSGTPAAASALAGLYLGMGDTEKAAAVVVRAAEAASRGDHDLEGDEQARALLGMADWLHDQGFHRQAADTYQKLLRLGAELDGDLRIQAQASLVIAYSYFDSGKSEEEASKLPYNADFGSIEGLDPLALEMTELPRSSKARKLVLVDKASQKAERRQ-NKRDPEAILKKRAXXXXXYIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRKRNKFVGAQGSGDGAAKDTAKLDALARAQAKQAASEKAAVLPPGVAIGKRGGKRR 694          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A7S2SJY1_9STRA (Signal recognition particle subunit SRP72 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJY1_9STRA)

HSP 1 Score: 262 bits (669), Expect = 4.990e-74
Identity = 239/689 (34.69%), Postives = 359/689 (52.10%), Query Frame = 0
Query:   31 DKAIQLCNSVRSKSPDDLDAIRVKCLC--LINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKRFPVEDVM-------------EEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIV-RSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPK-QLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALL-----SKQGKSAEASAVLEAR-----LKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLELGPELDG----EKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKD-------HEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RN-KFVGAQGSGDGAAKDAAKLDAHAKAQSRRD 679
            DK +++   +R     + DA   +C C  LI Q  +E+AL+ V+ +       E A+C+++L RL+EALDV       +  +T  ++   HL AQ LYR G    +A++Y ++  EE    G  +     V+ N  AAY AAG+  +A +   +++ +             EE  A +EL YN+  A +   G +  AE+          L QAE  C     A    E+   DE +I+ +Q AY  AI      A+   + +V  + P D +VA V+  NLA L   +      KRL  A ++      LP+ Q  + R N CLLLL   K  EC++E+  +   YP S   PRI AA+L     S +G  A  +A  + R     +K+ +E       + L L LAQL    GD+AAAA+ LE    +  +P A A  A +Y  +G+ E +  V++ A+++A   + G +   RA  L G+A     +G    AA+  S ++   PEL G      R+ + A L++A S+FD A +EE A  LP    +G A+ +D   LE T++P SSR ++L L+D+A +R ER+R   ++          VLR+R  RR+ Y++ L A G+ DP  P   PDPERWIP+  RSY KRG+K RN KF GAQG+G+GAAKDAAKLDA+A+AQ++++
Sbjct:   29 DKCLKIIAELRETLGGEQDACLDQCECVSLIRQHKFERALE-VARRSSGAFGFEEAFCLYQLKRLDEALDV-------LQAET--SDKALHLRAQVLYRKGDFDASAKVYQQL-VEEGTGSGVVEPN--EVTANAVAAYTAAGRGAQATEDLDLDEALINPGDPGDGEGAEEEATATFELTYNVACAHIAA-GCLAEAEI---------LLRQAERECRAALAADGCEEEDIQDEVAIIRAQRAYVLAILKHREEALGACEALVGEAWPKDRSVAAVTANNLACLHEDRHKASVQKRLKQASTDKDVLARLPRRQAVSLRCNYCLLLLALNKLGECRKEVDRLVQDYPDS-ARPRILAAVLDLKSASNKGAGAATAAASDLRGFAAGIKDQQER------SELELFLAQLDVDRGDVAAAAQALESAPGLRRSPNAIATAAAMYESLGRSEDSARVMEAALDSALHAD-GADPNARAALLRGVAAHRLSKGQLQGAADVLSALVS-NPELTGALASRDRLASIAQLIVASSWFDPAAAEEHAVSLP---PVGEADAVDVAALEFTDIPRSSRARRLALLDRAQKRNERKRAGAEEAGKASGPSPEVLRRRQMRREAYLSALTAAGKYDPKHPAT-PDPERWIPKKLRSYNKRGRKNRNAKFSGAQGTGEGAAKDAAKLDAYARAQAKKE 681          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A329S1T4_9STRA (Signal recognition particle subunit SRP72 n=25 Tax=Phytophthora TaxID=4783 RepID=A0A329S1T4_9STRA)

HSP 1 Score: 255 bits (652), Expect = 7.240e-72
Identity = 222/684 (32.46%), Postives = 360/684 (52.63%), Query Frame = 0
Query:   25 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVA-SLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQ-GEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 700
            L+ E++ +A+ +CN +RSK PDD+DA++VKC+ LI  + ++KAL+     +   LS E+AYC++RL + ++AL +  EGG   A  T    A  HL AQ  +R G + Q+  IY  + +     RG        +  NL AAYA+AG++ E   R  P++D        +E+ +N     +Q            + E AE  L  AE  C +   A   +E +  DE +++ +QLA+ + + G    A+   + +++ +  + AV  V++ N+ T+   +D  ++ KRL +  +      L P Q EA   N+ LLL    KTEEC+E L A++  +P S     I   L  K   +A A       +++L+     GDV+   RL LA +  + G +  AAE +  I+ ++ +P   A L  LY +      A  V++ A+     G++  E   +A  +     W++  +  Y  AA+ Y ++LE      LD + R+++ A+LV+A S+ D+  +E   + LP  ++ G    +DP ELE  ++P S+R+      D   ++ ER+R   K  EA+ R+RAKRR+ ++A L A  + + +  +  PDPERWIPR  RS+GKRG++ RN+FVGAQG+G G  KDA KLDA A+A  ++  D P  +V+  G  I K   K+R
Sbjct:   22 LKRENYSRAVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAV--KYEFLSTEKAYCLYRLKQDDDALKLL-EGGDLEAQST----AQLHLAAQLHFRKGNYDQSTRIYELLLS-----RGQEGDDLLELRTNLLAAYASAGRSHELKDREIPIDD-------GFEVAFNKSFVAIQSG----------DWEAAEELLLTAERLCRDTFVAEGASEAEIEDEVAVIKTQLAFVKQMRGDLDGALSDYRNVLKLKLRNRAVGAVASNNIVTIRKDRDVLDSFKRLKNIDASVLSDKLNPAQQEAILTNRALLLCLMNKTEECRESLEALKKQFPLSKSIADIVVLLAIKDQSAAGA-------IEQLQ-----GDVSVGGRLGLAHVYLTEGQVLKAAECIRSIEQLAHSPGTVATLVALYEQADDSASAQAVLESALTHHKAGDYTSE---QATKIREGDCWYKIQKKQYREAADAYLELLEGQTAGALDRDLRLRSMASLVVALSFCDAEAAEARCAMLPAVEESG----VDPSELEK-QVPRSTRLA-AKFADTGDKKSERKRA-AKSPEAIARKRAKRREAHLANLRARPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKDALKLDAAARAARKAESDKPAAVVVSSGSGIRKSKKKKR 654          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A8K1FG56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG56_PYTOL)

HSP 1 Score: 253 bits (646), Expect = 4.600e-71
Identity = 224/668 (33.53%), Postives = 348/668 (52.10%), Query Frame = 0
Query:   17 VWRRVQECLRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKAQSRRDM 680
            V+  +Q  L  E++ KAI++CN +RSK+P+D DAI++KC+ LI Q+ ++KAL+     +  +L+ ER YC++RL + +EAL +      S         A+ HL AQ  +R G + +A  IY E+ A  + K GD       +  NL AAY +AG+  E  +R  P +D       ++E+ +N           +  A  +++   AE  L ++E+ C E  +A   +  +  +E +I+ +QLA+ + + G    A+   + I++ + S+ AV  V++ N+ T+   +D  ++LKRL S  S      L P Q EA   N+ L+L    K EEC+E +  ++ ++P S     I   L  K    AEA A LE       +A +SG     RL LA L  + G +  AA+ +  I +I+ TP   A L  L+   G    A  V+Q+A+E     +         K   G   +   +  Y  AAE Y +++E      LD E R+Q+ A+LV+A S+ D   +E     LP   +     E+DPVELE      S    KLV  D   ++ ER+R   K+ E V R+RAKRR+ ++ KL +  + + +  +  PDPERWIPR  RSY KRG++ RN+FVGAQG+G G  KDAAKLDA A+A  + ++
Sbjct:    5 VFAELQAALGRENYAKAIEICNKIRSKNPEDEDAIKIKCVALIRQEKFDKALELAV--KYPVLASERVYCLYRLKKDDEALALLPAELNSATASP----AVLHLAAQLHFRKGDYERAIAIYEELLA--NAKDGD---DVMELQTNLLAAYTSAGRTQELAQRDIPTDD-------SFEVAFN--------KSFIAIASGDWQ--QAEELLTESEKLCREVLEADGASATEVENELAIIRTQLAFVKQMQGDVDGALSDYRNILKLKLSNQAVGAVASNNIVTIRADRDLFDSLKRLKSIESIVLSDKLAPAQQEAILANRALVLCLMNKIEECRESVATLKKLFPESRALSEITVFLALKDQNPAEAIAALET------DASTSG-----RLGLAHLYLAQGQVKQAAKCVASISSIAHTPGTVATLVALFEAAGDASSALQVLQDALEH--HKQLDFTSREAMKIREGDCAFKVQKKQYKAAAEAYLELMEGENAGALDPELRLQSLASLVVALSFSDPQAAEMRCGLLPAVPEC----EVDPVELEQQAKRSSRLASKLV--DAGDKKNERKRA-AKNPERVARKRAKRREAHLTKLRSRDDYNASIGLINPDPERWIPRKQRSYAKRGRRGRNRFVGAQGAGMGTDKDAAKLDAAARAAKKAEV 624          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A225VNP6_9STRA (Signal recognition particle subunit SRP72 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VNP6_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.280e-69
Identity = 216/683 (31.63%), Postives = 357/683 (52.27%), Query Frame = 0
Query:   25 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQ-GEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 700
            L+ E++ + + +CN +RSK PDD+DA++VKC+ LI  + ++KAL+     +   LS E+AYC++RL + +EAL+V   G   M     ++ A  HL AQ  +R G + Q+  IY  +++   E  GD       +  NL AAYA+AG++ E  +R  P+ED        +E+ +N     +Q            + + AE  L+ AE  C +   +   +E +  +E +++ +QLA+ + + G    A+   + +++ +  + AV +V++ N+ T+   +D  ++LKRL S  +      L P+Q EA   N+ LLL    K EEC+E L+ +R  +P S     I   L  K    A   A ++    ++   G  G        LA +  + G +  AAE +  I+ ++ +P   A L  LY + G    A  V++ A+     G++  E   +A  +     W++  +  Y  AA  Y ++LE      LD + R+++ A+LV+A S+FD+  +E   + LP   + G    +DP ELE  + P S+R+      D   ++ ER+R   K   ++ R+RAKRR+ ++A L +  + + +  +  PDPERWIPR  RS+GKRG++ RN+FVGAQGSG G  KDA KLDA A+A  ++  D P  +V+  G  I K   K+R
Sbjct:   18 LKRENYARVVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAV--KYEFLSTEKAYCLYRLKKDDEALNVLVGGDLEM-----QSTAQLHLAAQMHFRKGDYDQSIRIYELLFSRAQE--GD---DLLELQTNLLAAYASAGRSQELKEREIPIED-------GFEVAFNKSFVAIQSG----------DWKMAEELLQTAERLCRDTFVSEGASEAEIDEEVAVIKTQLAFVKQMRGDLDGALSDYRNVLKLKLRNRAVGVVASNNIVTIRKDRDVLDSLKRLKSIDAAVLSDKLNPEQQEAILTNRTLLLCLVNKVEECRENLQVLRKQFPESKSIADIVVLLAIKDQSPA---AAIDQLRGDMSVGGGLG--------LAHVYLTEGLVVKAAECIRSIEQLAHSPGTVATLVALYEQAGDSGTAEIVLETALAHHKAGDYTSE---QAMKIREGDCWYKIQKKQYREAANAYLELLEGETAGALDRDLRLRSMASLVVALSFFDAEAAEARCAMLPTVKESG----VDPSELEK-QAPRSARLA-TKFADTGDKKSERKRA-AKSPASIARKRAKRREAHLANLRSRSDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGSGMGTEKDALKLDAAARAARKAESDKPAAVVVSSGSGIRKSKKKKR 650          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: G5A3J2_PHYSP (Signal recognition particle subunit SRP72 n=2 Tax=Phytophthora TaxID=4783 RepID=G5A3J2_PHYSP)

HSP 1 Score: 247 bits (630), Expect = 9.940e-69
Identity = 216/683 (31.63%), Postives = 359/683 (52.56%), Query Frame = 0
Query:   25 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQ-GEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 700
            L+ E++ +A+ +CN +RSK PDD+DA++VKC+ LI  + ++KAL+     +   LS E+AYC++RL + ++AL +   GG  +  +T+ T  L HL AQ  +R G + Q+  IY  + +     RG        +  NL AAYA+AG++ E   R  P++D        +E+ +N     +Q +          + E AE  L  AE  C +   A   +E +  +E +++ +QLAY + + G    A+   + +++ +  + AV  V++ N+ T+   +D  ++ KRL +  +      L P Q EA   N+ LLL    KTEEC+E L A++  +P+S     I   L  K            A +++L++  S G     RL LA +  + G +  AAE +  I+ ++ +P   A L  LY + G    A  V++ A+     G +  E   +A  +     W++  +  Y  AA+ Y ++LE      +D + R+++ A+LV+A S+ D+  +E   + LP  ++ G    +DP ELE  + P S+R+      D   ++ ER+R   K  E++ R+RAKRR+ ++ KL +  + + +  +  PDPERWIPR  RS+GKRG++ RN+FVGAQG+G G  KDA KLDA A+A  ++  D P  +V+     I K   K+R
Sbjct:   22 LKRENYSRAVDICNKIRSKLPDDVDAVKVKCVALIRLEKFDKALELAV--KYDFLSTEKAYCLYRLKQDDDALKLL--GGGDL--ETQSTAQL-HLAAQLHFRKGDYDQSIRIYELLLS-----RGPEGDDLLELQTNLLAAYASAGRSQELKDREIPIDD-------GFEVAFNKSFVAIQSS----------DWEAAEELLLTAERLCCDTFVAEGASEAEIEEEVAVIKTQLAYVKQMRGNLDDALSDYRNVLKLKLRNRAVGAVASNNIVTIRQDRDVLDSFKRLKNIDTAVLSDKLNPTQQEAILTNRTLLLCLMNKTEECRESLEALKKQFPASKSIADIVVLLAIKDQSPG-------AAIEQLQDDMSVGG----RLGLAHVYLTEGHVLKAAECIRSIEELAHSPGTVATLVALYEQAGDSASAQAVLERALIHHRAGNYTSE---QAMKIREGDCWYKIQKKQYREAADAYLELLEGETAGAMDRDLRLRSMASLVVALSFCDAEAAEARCAMLPAVEESG----VDPSELEK-QAPRSNRLA-AKFADTGDKKNERKRA-AKSPESIARKRAKRREAHLTKLRSRPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKDALKLDAAARAARKAESDKPAAVVVSSDSGIRKSKKKKR 654          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A2D4BMZ3_PYTIN (Signal recognition particle subunit SRP72 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMZ3_PYTIN)

HSP 1 Score: 242 bits (617), Expect = 4.980e-67
Identity = 225/662 (33.99%), Postives = 338/662 (51.06%), Query Frame = 0
Query:   21 VQECLRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALL----GMADWFQGEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA 674
            +Q  L  E++ +AI++CN +RSK+PDD DA+++KC+ LI  + ++KAL+ ++ K  AL + ERAYC++RL R ++AL +   G  S       T A RHL AQ  YR G +AQA ++      +E   RG+       +  NL AAYA+AG++ E   R  PV+D       +WE+ +N     ++  G   AA+           L  AE  C E  +A   +  +  +E + V  Q A+ + + G   AA+   + +++ + ++ AV  V+T N+  +   +D  ++LKRL +  +      L P Q EA   N+ LLL    K EEC+  L+ ++  +P + LA  I   L  K      A   +EA    L   G        RL LA L  +    A AAE LE I  I  TP   A L  LY   G    A  V+Q A++      H    + R+ + +    G   +   +  Y  AA+ Y ++LE      +D + R+ + A+LV+A S+ D+A +E  +  LP   +     E DP ELE      S    KL   D   ++ ER+R   K+ E + R+RAKRRD ++ KL +  + +P   +  PDPERWIPR  RSY KRG++ RN+FVGAQG+G G  KDAAKLDA A+A
Sbjct:   10 LQAALSRENYARAIEICNKIRSKTPDDQDAVKIKCVALIRLEKFDKALE-LAVKYPALAA-ERAYCLYRLKRDDDALQLL--GAAS-------TPAQRHLAAQIHYRKGQYAQAIDLLL----QEATGRGE---DLTELHANLLAAYASAGRSQELEHRDIPVDD-------SWEVAFNKSFTAIE-TGDWSAADAH---------LSDAERLCREMLEADGVSAAEMENELAPVRVQKAFVKQMQGDHDAALAEYRAVLKLKLTNQAVGAVATNNIVAIRNDRDLLDSLKRLKALDAVVQSDKLTPVQQEAILANRALLLALLNKPEECRAALQTLQAQFPHARLASEITVLLAVKDHH---ADGAIEALQGNLSLGG--------RLGLAHLYLAQRQPARAAECLESIAEIQHTPGTVATLVALYDAAGNSASAQRVLQRALD------HHRAVDFRSPSAMKIREGDCSYKIQKKQYQAAADAYLELLEGESAGAMDPDLRLHSLASLVVALSFCDAAAAEMRSVLLPPVPEC----ETDPAELEQQAQRSSRLASKLA--DVGDKKNERKRA-AKNPERIARKRAKRRDAHLEKLRSRPDYNPTIGLINPDPERWIPRKQRSYAKRGRRGRNRFVGAQGAGMGTDKDAAKLDAAARA 612          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A3F2RYS3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYS3_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.850e-66
Identity = 221/686 (32.22%), Postives = 354/686 (51.60%), Query Frame = 0
Query:   25 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTR-RTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVA-SLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMAD-WFQ-GEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 700
            L+ E++ +A+ +CN +RSK PDD+DA++VKCL LI  + ++KAL+     +   LS E+AYC++RL + +EAL +       + GD   +T A  HL AQ  +R G + Q+  IY  + +   E  GD       +  NL AAYA+A ++ E   R  P++D        +E+ +N     +Q +G   AAE           L  AE  C E   A   +E +  +E +++ +QLA+ + + G    A+   + +++ +  + AV  V++ N+  +    D  ++ KRL +  +      L   Q EA   N+ LLL    KTEEC+E L  ++  +P S     I   L  K    A A       +++L+     GDV+   RL LA +  + G +  AAE +  I+ ++ TP   A L  LY E G    A  V++  +E     ++  E  ++ +      D W++  +  Y  AA+ Y ++LE      LD + R+++ A+LV+A S+ D+  +E   + LP  ++ G    +DP ELE  E P S+R+      DK ++R+       K  E++ R+RAKRR+ Y+  L A  + + +  +  PDPERWIPR  RS+GKRG++ RN+FVGAQG+G G  KDA KLDA A+A  ++  D P  +V+  G  I K   K+R
Sbjct:  310 LKRENYSRAVDICNKIRSKLPDDVDAVKVKCLALIRLEKFDKALELAV--KYDFLSTEKAYCLYRLKQDDEALAL-------LNGDLETQTTAQLHLAAQLQFRKGDYDQSIRIYELLLSHAQE--GD---DLLELQTNLLAAYASADRSEELKDREIPIDD-------GFEVAFNKSFVAIQ-SGDWAAAE---------DLLATAERLCRETFAAEGASEAEIEEEVAVIKTQLAFVKQMRGDLDGALSDYRNVLKIKLRNRAVGAVASNNIVAIRKDHDVLDSFKRLKNIDTAVLSEKLSLTQQEAILTNRTLLLCLLNKTEECRESLETLKKKFPESKSIADIVVLLAIKDQSPAVA-------IEQLQ-----GDVSVGGRLGLAHVYLTEGHVLKAAECIRSIEQLAHTPGTVATLVALYEEAGDSASAQTVLKSTLEHHRASDYTSEQAMKVRE----GDCWYKIQKKQYREAADAYLELLEGETAGALDRDLRLRSMASLVVALSFCDTEAAEARCTMLPTVEESG----VDPSELEK-EAPRSNRLAVKFAEDKKNERKRA----AKSPESISRKRAKRREAYLTNLRARPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKDALKLDAAARAARKAESDKPAAVVVTSGSGIRKSKKKKR 939          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A0P1ATR4_PLAHL (Signal recognition particle subunit SRP72 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATR4_PLAHL)

HSP 1 Score: 235 bits (600), Expect = 1.780e-64
Identity = 215/683 (31.48%), Postives = 345/683 (50.51%), Query Frame = 0
Query:   25 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYP-SSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 700
            ++ E + +A+ +CN +RSK PDD+DA++VKCL LI  + ++KAL+     +   L  E+AYC++RL +  EAL    EG    +  T     + HL AQ  +R  M+ Q+  IY  + ++  E     +     +  NL AAYA+A ++ E   R  PV++        +E+ YN     +Q            + + AE  L  AE    +  +A   +  +A +E +I+ +QLAY + + G    A+   + I++S+  + AV LV++ N+ T+   +D  ++LKRL S  +      L P Q EA   N+ LLL    KTEEC+E L  ++  +P S  +A  +    ++ Q  +          +++L+   S G     RL LA +    G +  AAE +  ID ++ TP   A L  +Y ++G    A  V++ A+  A       + E   K   G   +   +  Y  A + Y ++LE      +D + R+++ A+LV+A SY+D+  +E   + LP          MD  ELE +  P S R+      D   +R ER+ +  K  EA+ R+RAKRR+ ++A L A  + +    +  PDPERWIPR  RS+GKRG++ RN+FVGAQG+G G  KDA KLDA A+A  ++  D P  +++     I K   K+R
Sbjct:   22 IKGEHYSRAVDICNKIRSKFPDDMDAVKVKCLALIRMEKFDKALELAV--KYEYLDTEKAYCLYRLKQDAEALKTI-EGRDIQSLSTE----MLHLAAQLYFRNEMYDQSIRIYELLLSQAKENDNLLE-----LRTNLLAAYASASRSKELKSRQIPVDE-------GFEVAYNKSFVFIQLQ----------DWDKAEELLLTAERFGRDALEADGISGSEAEEEMAIIKTQLAYVKQMRGNLDEALSDYRDILKSKLRNRAVGLVASNNIVTIRKDRDVLDSLKRLKSIDTYMLTEKLNPAQREAILTNRALLLCLSNKTEECRESLEKLKKQFPMSKSIADIVVLLAINDQSPTV--------AIEQLQNDASVGG----RLGLAHVYMVEGHVLKAAECIRSIDQLAHTPGTVATLVAMYEQVGDSASAQAVLESAL--AYHKTLDYKSEYAMKIREGDCWYKIQKKQYREATDAYMELLEGVTAGAMDRDLRLRSIASLVVALSYYDAEAAEARCAMLP----AVKESSMDASELE-SRAPRSIRLA-TKFTDTGDKRNERK-VAAKSPEAIARKRAKRREAHLANLRARPDYNAFIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKDAIKLDAAARAARKAESDKPTAVLVTSSSGIRKSKKKKR 654          
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: K3X5P8_GLOUD (Signal recognition particle subunit SRP72 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5P8_GLOUD)

HSP 1 Score: 234 bits (597), Expect = 4.470e-64
Identity = 207/663 (31.22%), Postives = 335/663 (50.53%), Query Frame = 0
Query:   25 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMY--AEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKRFPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKAQSRRDMPE 682
            L+ E++ KA+++CN +RS+ PDD+DA+++KC+ LI  + ++KAL+  +  +   LS E+AYC++RL + EEAL +   G +  +        L HL AQ  +R G +     IY  +   A+E E   +       +  NL AAYA+AG+A +      V++V       +E+ +N     ++            + + AE  L +AE+ C E   A   +E +  +E +++ +QLA+ + + G    A+   + +++ +  + AV  V+  N+ T+   +D  E+ KRL +   E     L   Q EA   N+ L+L    KT+EC+E++  ++  +P S     I   L  K    A       A ++ L++  S G     RL LA +  S G  A AA+ +  I+ I+ TP   A +  LY   G    A   +  A+  A             K   G       +  Y  A E Y  +LE      LD E R+++ A+LV+A S+ D+  +E  +  LP         +++P ELE   L  +  + KLV  D   ++ ER+R   K+ E++ R+RAKRR+ ++A L A  + +    +  PDPERWIP+  RS+GKRG++ RN+FVGAQG+G G  KDAAKLDA A+A  + D+PE
Sbjct:   17 LKRENYAKAVEICNKIRSRYPDDVDAVKIKCVALIRMEKFDKALELAA--KYDYLSTEKAYCLYRLKKDEEALALLPSGLQGHSAT------LLHLAAQLNFRKGNYETCIRIYEHLVSIAQEGEDLME-------LQTNLLAAYASAGRARD------VDEVSIPTDDNYEVAFNKSFISIEAG----------QWDAAEAHLIEAEKLCRETFAAEGSSEAEIDNEVALIKTQLAFVKQMKGDLDGALSDYRNVLKLKLRNQAVGAVAANNIVTIRNDRDLFESFKRLKNINDELLSDKLTVSQQEAILANRALVLCLMNKTDECREQVAQLKKRFPESKTISDIIVFLALKDQSPA-------AAIELLQDDASVGG----RLGLAHVYLSQGQPAKAAKCINSIEEIAHTPGTVATVVSLYEAAGDAAAAQATLDRAI--AFHKARDYSSSHAMKIREGDCSHKIQKKQYQAATEAYLDLLEGENAAALDPELRLRSLASLVVALSFCDAKAAETRSVMLP----AVMESDVEPSELERLALKSNRLLTKLV--DAGDKKNERKRA-AKNPESIARKRAKRREAHLANLRARPDYNATIGLLNPDPERWIPKKQRSHGKRGRRGRNRFVGAQGAGMGTEKDAAKLDAAARAAKKADIPE 628          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ93_ECTSI3.990e-30066.76Signal recognition particle subunit SRP72 n=2 Tax=... [more]
A0A7S2SJY1_9STRA4.990e-7434.69Signal recognition particle subunit SRP72 n=2 Tax=... [more]
A0A329S1T4_9STRA7.240e-7232.46Signal recognition particle subunit SRP72 n=25 Tax... [more]
A0A8K1FG56_PYTOL4.600e-7133.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225VNP6_9STRA1.280e-6931.63Signal recognition particle subunit SRP72 n=1 Tax=... [more]
G5A3J2_PHYSP9.940e-6931.63Signal recognition particle subunit SRP72 n=2 Tax=... [more]
A0A2D4BMZ3_PYTIN4.980e-6733.99Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A0A3F2RYS3_9STRA2.850e-6632.22Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A0P1ATR4_PLAHL1.780e-6431.48Signal recognition particle subunit SRP72 n=1 Tax=... [more]
K3X5P8_GLOUD4.470e-6431.22Signal recognition particle subunit SRP72 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 664..680
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 399..548
e-value: 3.5E-7
score: 32.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 216..391
e-value: 3.6E-6
score: 28.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 14..177
e-value: 5.8E-33
score: 115.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 371..532
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 82..205
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 257..396
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 22..357
IPR026270Signal recognition particle, SRP72 subunitPIRSFPIRSF038922SRP72coord: 3..693
e-value: 6.1E-85
score: 284.0
IPR026270Signal recognition particle, SRP72 subunitPANTHERPTHR14094SIGNAL RECOGNITION PARTICLE 72coord: 14..676

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig93contigA-nodosum_M_contig93:244043..256001 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig93.42.2mRNA_A-nodosum_M_contig93.42.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig93 243907..256153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig93.42.2 ID=prot_A-nodosum_M_contig93.42.2|Name=mRNA_A-nodosum_M_contig93.42.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=701bp
MDADGMEESVLTPSQKVWRRVQECLRNEDFDKAIQLCNSVRSKSPDDLDA
IRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVA
REGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRG
DADRGFPAVSVNLAAAYAAAGKAVEALKRFPVEDVMEEEGAAWELLYNLG
TALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADE
ASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLG
GFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQ
EELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSS
GDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEM
GKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAA
ETYSKVLELGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDL
GSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLR
QRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKKRNK
FVGAQGSGDGAAKDAAKLDAHAKAQSRRDMPEKIVLPPGIVIGKRAGKRR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR026270SRP72