mRNA_A-nodosum_M_contig93.42.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: D7FJ93_ECTSI (Signal recognition particle subunit SRP72 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ93_ECTSI) HSP 1 Score: 844 bits (2180), Expect = 1.330e-298 Identity = 470/704 (66.76%), Postives = 561/704 (79.69%), Query Frame = 3
Query: 153 MDADGMEESVLTPSQKVWRRVQECLRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREG--GRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKRFPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGID-AISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLELGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKKRNKFVGAQGSGDGAAKDAAKLDAHAKAQSRRDMPEKI-VLPPGIVIGKRAGKRR 2252
M+ DG+ E V+T SQ+VWR V+ CL+NEDFDKA+QLCN+VRSKSPDD+DAIRVKCLCLI+QD Y+KALQS SGK KA+LSPERAYC+FRLGRLEEAL+V+R G G S GD++R ALRHLEAQALYRLG H +AAE+Y + EDE+R GFP VSVN+AAAYA AG +AL VE+ MEEEGA WELLYNLGTAL+QR G G + AE+CL+QAEE C E A+ ++ +AADEAS+V SQLAYA + AGK AAA E+L Q+VRSRPSD AV+LVST NLA LGG+KD QEALKRL +AMSE +E+GLL KQLEACRFNKCLLLLQCGKTEEC++EL AVR YP+SDL PRIEAALLSK+GK EAS+VL+A L + + GS +V SL+LC+AQL A+ DL AAETLEG+ A+SGTPAA++ALA LY+ MG EKA VV A EAA RG+H LEG+ +A+ALLGMADW +G + +AA+TY K+L LG ELDG+ R+QAQA+LVIAYSYFDS KSEEEASKLPYN D GS E +DP+ LEMTELP SS+ +KLVLVDKASQ+ ERR+ ++D EA+L++RA YIAKL+ +G+IDP KPVPKPDPERWIPRSHR+YGKRG+KRNKFVGAQGSGDGAAKD AKLDA A+AQ+++ EK VLPPG+ IGKR GKRR
Sbjct: 1 MEVDGVAEVVVTESQRVWREVRACLQNEDFDKAVQLCNTVRSKSPDDIDAIRVKCLCLIHQDKYDKALQSASGKHKAVLSPERAYCLFRLGRLEEALEVSRAGESGVSGGGDSKRARALRHLEAQALYRLGRHGEAAEVYCSI--AEDEERRTGGGGFPPVSVNVAAAYAGAGCGEKALGALSVEEAMEEEGAPWELLYNLGTALVQRRGGAGD-----DTAAAESCLQQAEEACRESLVALGHSDAEAADEASMVRSQLAYAASRAGKTAAAAEQLNQVVRSRPSDPAVSLVSTANLAALGGYKDQQEALKRLKAAMSEKSEKGLLSKQLEACRFNKCLLLLQCGKTEECRDELEAVRSAYPNSDLGPRIEAALLSKRGKGGEASSVLKAHLAKAKP-GSKEEV-SLKLCVAQLYATENDLTLAAETLEGVGGAVSGTPAAASALAGLYLGMGDTEKAAAVVVRAAEAASRGDHDLEGDEQARALLGMADWLHDQGFHRQAADTYQKLLRLGAELDGDLRIQAQASLVIAYSYFDSGKSEEEASKLPYNADFGSIEGLDPLALEMTELPRSSKARKLVLVDKASQKAERRQ-NKRDPEAILKKRAXXXXXYIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRKRNKFVGAQGSGDGAAKDTAKLDALARAQAKQAASEKAAVLPPGVAIGKRGGKRR 694
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A7S2SJY1_9STRA (Signal recognition particle subunit SRP72 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJY1_9STRA) HSP 1 Score: 262 bits (669), Expect = 3.270e-73 Identity = 239/689 (34.69%), Postives = 359/689 (52.10%), Query Frame = 3
Query: 243 DKAIQLCNSVRSKSPDDLDAIRVKCLC--LINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKRFPVEDVM-------------EEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIV-RSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPK-QLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALL-----SKQGKSAEASAVLEAR-----LKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLELGPELDG----EKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKD-------HEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RN-KFVGAQGSGDGAAKDAAKLDAHAKAQSRRD 2189
DK +++ +R + DA +C C LI Q +E+AL+ V+ + E A+C+++L RL+EALDV + +T ++ HL AQ LYR G +A++Y ++ EE G + V+ N AAY AAG+ +A + +++ + EE A +EL YN+ A + G + AE+ L QAE C A E+ DE +I+ +Q AY AI A+ + +V + P D +VA V+ NLA L + KRL A ++ LP+ Q + R N CLLLL K EC++E+ + YP S PRI AA+L S +G A +A + R +K+ +E + L L LAQL GD+AAAA+ LE + +P A A A +Y +G+ E + V++ A+++A + G + RA L G+A +G AA+ S ++ PEL G R+ + A L++A S+FD A +EE A LP +G A+ +D LE T++P SSR ++L L+D+A +R ER+R ++ VLR+R RR+ Y++ L A G+ DP P PDPERWIP+ RSY KRG+K RN KF GAQG+G+GAAKDAAKLDA+A+AQ++++
Sbjct: 29 DKCLKIIAELRETLGGEQDACLDQCECVSLIRQHKFERALE-VARRSSGAFGFEEAFCLYQLKRLDEALDV-------LQAET--SDKALHLRAQVLYRKGDFDASAKVYQQL-VEEGTGSGVVEPN--EVTANAVAAYTAAGRGAQATEDLDLDEALINPGDPGDGEGAEEEATATFELTYNVACAHIAA-GCLAEAEI---------LLRQAERECRAALAADGCEEEDIQDEVAIIRAQRAYVLAILKHREEALGACEALVGEAWPKDRSVAAVTANNLACLHEDRHKASVQKRLKQASTDKDVLARLPRRQAVSLRCNYCLLLLALNKLGECRKEVDRLVQDYPDS-ARPRILAAVLDLKSASNKGAGAATAAASDLRGFAAGIKDQQER------SELELFLAQLDVDRGDVAAAAQALESAPGLRRSPNAIATAAAMYESLGRSEDSARVMEAALDSALHAD-GADPNARAALLRGVAAHRLSKGQLQGAADVLSALVS-NPELTGALASRDRLASIAQLIVASSWFDPAAAEEHAVSLP---PVGEADAVDVAALEFTDIPRSSRARRLALLDRAQKRNERKRAGAEEAGKASGPSPEVLRRRQMRREAYLSALTAAGKYDPKHPAT-PDPERWIPKKLRSYNKRGRKNRNAKFSGAQGTGEGAAKDAAKLDAYARAQAKKE 681
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A329S1T4_9STRA (Signal recognition particle subunit SRP72 n=25 Tax=Phytophthora TaxID=4783 RepID=A0A329S1T4_9STRA) HSP 1 Score: 255 bits (651), Expect = 6.190e-71 Identity = 222/684 (32.46%), Postives = 360/684 (52.63%), Query Frame = 3
Query: 225 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVA-SLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQ-GEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 2252
L+ E++ +A+ +CN +RSK PDD+DA++VKC+ LI + ++KAL+ + LS E+AYC++RL + ++AL + EGG A T A HL AQ +R G + Q+ IY + + RG + NL AAYA+AG++ E R P++D +E+ +N +Q + E AE L AE C + A +E + DE +++ +QLA+ + + G A+ + +++ + + AV V++ N+ T+ +D ++ KRL + + L P Q EA N+ LLL KTEEC+E L A++ +P S I L K +A A +++L+ GDV+ RL LA + + G + AAE + I+ ++ +P A L LY + A V++ A+ G++ E +A + W++ + Y AA+ Y ++LE LD + R+++ A+LV+A S+ D+ +E + LP ++ G +DP ELE ++P S+R+ D ++ ER+R K EA+ R+RAKRR+ ++A L A + + + + PDPERWIPR RS+GKRG++ RN+FVGAQG+G G KDA KLDA A+A ++ D P +V+ G I K K+R
Sbjct: 22 LKRENYSRAVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAV--KYEFLSTEKAYCLYRLKQDDDALKLL-EGGDLEAQST----AQLHLAAQLHFRKGNYDQSTRIYELLLS-----RGQEGDDLLELRTNLLAAYASAGRSHELKDREIPIDD-------GFEVAFNKSFVAIQSG----------DWEAAEELLLTAERLCRDTFVAEGASEAEIEDEVAVIKTQLAFVKQMRGDLDGALSDYRNVLKLKLRNRAVGAVASNNIVTIRKDRDVLDSFKRLKNIDASVLSDKLNPAQQEAILTNRALLLCLMNKTEECRESLEALKKQFPLSKSIADIVVLLAIKDQSAAGA-------IEQLQ-----GDVSVGGRLGLAHVYLTEGQVLKAAECIRSIEQLAHSPGTVATLVALYEQADDSASAQAVLESALTHHKAGDYTSE---QATKIREGDCWYKIQKKQYREAADAYLELLEGQTAGALDRDLRLRSMASLVVALSFCDAEAAEARCAMLPAVEESG----VDPSELEK-QVPRSTRLA-AKFADTGDKKSERKRA-AKSPEAIARKRAKRREAHLANLRARPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKDALKLDAAARAARKAESDKPAAVVVSSGSGIRKSKKKKR 654
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A8K1FG56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG56_PYTOL) HSP 1 Score: 253 bits (646), Expect = 2.780e-70 Identity = 224/668 (33.53%), Postives = 348/668 (52.10%), Query Frame = 3
Query: 201 VWRRVQECLRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKAQSRRDM 2192
V+ +Q L E++ KAI++CN +RSK+P+D DAI++KC+ LI Q+ ++KAL+ + +L+ ER YC++RL + +EAL + S A+ HL AQ +R G + +A IY E+ A + K GD + NL AAY +AG+ E +R P +D ++E+ +N + A +++ AE L ++E+ C E +A + + +E +I+ +QLA+ + + G A+ + I++ + S+ AV V++ N+ T+ +D ++LKRL S S L P Q EA N+ L+L K EEC+E + ++ ++P S I L K AEA A LE +A +SG RL LA L + G + AA+ + I +I+ TP A L L+ G A V+Q+A+E + K G + + Y AAE Y +++E LD E R+Q+ A+LV+A S+ D +E LP + E+DPVELE S KLV D ++ ER+R K+ E V R+RAKRR+ ++ KL + + + + + PDPERWIPR RSY KRG++ RN+FVGAQG+G G KDAAKLDA A+A + ++
Sbjct: 5 VFAELQAALGRENYAKAIEICNKIRSKNPEDEDAIKIKCVALIRQEKFDKALELAV--KYPVLASERVYCLYRLKKDDEALALLPAELNSATASP----AVLHLAAQLHFRKGDYERAIAIYEELLA--NAKDGD---DVMELQTNLLAAYTSAGRTQELAQRDIPTDD-------SFEVAFN--------KSFIAIASGDWQ--QAEELLTESEKLCREVLEADGASATEVENELAIIRTQLAFVKQMQGDVDGALSDYRNILKLKLSNQAVGAVASNNIVTIRADRDLFDSLKRLKSIESIVLSDKLAPAQQEAILANRALVLCLMNKIEECRESVATLKKLFPESRALSEITVFLALKDQNPAEAIAALET------DASTSG-----RLGLAHLYLAQGQVKQAAKCVASISSIAHTPGTVATLVALFEAAGDASSALQVLQDALEH--HKQLDFTSREAMKIREGDCAFKVQKKQYKAAAEAYLELMEGENAGALDPELRLQSLASLVVALSFSDPQAAEMRCGLLPAVPEC----EVDPVELEQQAKRSSRLASKLV--DAGDKKNERKRA-AKNPERVARKRAKRREAHLTKLRSRDDYNASIGLINPDPERWIPRKQRSYAKRGRRGRNRFVGAQGAGMGTDKDAAKLDAAARAAKKAEV 624
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A225VNP6_9STRA (Signal recognition particle subunit SRP72 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VNP6_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.030e-68 Identity = 216/683 (31.63%), Postives = 357/683 (52.27%), Query Frame = 3
Query: 225 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQ-GEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 2252
L+ E++ + + +CN +RSK PDD+DA++VKC+ LI + ++KAL+ + LS E+AYC++RL + +EAL+V G M ++ A HL AQ +R G + Q+ IY +++ E GD + NL AAYA+AG++ E +R P+ED +E+ +N +Q + + AE L+ AE C + + +E + +E +++ +QLA+ + + G A+ + +++ + + AV +V++ N+ T+ +D ++LKRL S + L P+Q EA N+ LLL K EEC+E L+ +R +P S I L K A A ++ ++ G G LA + + G + AAE + I+ ++ +P A L LY + G A V++ A+ G++ E +A + W++ + Y AA Y ++LE LD + R+++ A+LV+A S+FD+ +E + LP + G +DP ELE + P S+R+ D ++ ER+R K ++ R+RAKRR+ ++A L + + + + + PDPERWIPR RS+GKRG++ RN+FVGAQGSG G KDA KLDA A+A ++ D P +V+ G I K K+R
Sbjct: 18 LKRENYARVVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAV--KYEFLSTEKAYCLYRLKKDDEALNVLVGGDLEM-----QSTAQLHLAAQMHFRKGDYDQSIRIYELLFSRAQE--GD---DLLELQTNLLAAYASAGRSQELKEREIPIED-------GFEVAFNKSFVAIQSG----------DWKMAEELLQTAERLCRDTFVSEGASEAEIDEEVAVIKTQLAFVKQMRGDLDGALSDYRNVLKLKLRNRAVGVVASNNIVTIRKDRDVLDSLKRLKSIDAAVLSDKLNPEQQEAILTNRTLLLCLVNKVEECRENLQVLRKQFPESKSIADIVVLLAIKDQSPA---AAIDQLRGDMSVGGGLG--------LAHVYLTEGLVVKAAECIRSIEQLAHSPGTVATLVALYEQAGDSGTAEIVLETALAHHKAGDYTSE---QAMKIREGDCWYKIQKKQYREAANAYLELLEGETAGALDRDLRLRSMASLVVALSFFDAEAAEARCAMLPTVKESG----VDPSELEK-QAPRSARLA-TKFADTGDKKSERKRA-AKSPASIARKRAKRREAHLANLRSRSDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGSGMGTEKDALKLDAAARAARKAESDKPAAVVVSSGSGIRKSKKKKR 650
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: G5A3J2_PHYSP (Signal recognition particle subunit SRP72 n=2 Tax=Phytophthora TaxID=4783 RepID=G5A3J2_PHYSP) HSP 1 Score: 246 bits (629), Expect = 7.850e-68 Identity = 216/683 (31.63%), Postives = 359/683 (52.56%), Query Frame = 3
Query: 225 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQ-GEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 2252
L+ E++ +A+ +CN +RSK PDD+DA++VKC+ LI + ++KAL+ + LS E+AYC++RL + ++AL + GG + +T+ T L HL AQ +R G + Q+ IY + + RG + NL AAYA+AG++ E R P++D +E+ +N +Q + + E AE L AE C + A +E + +E +++ +QLAY + + G A+ + +++ + + AV V++ N+ T+ +D ++ KRL + + L P Q EA N+ LLL KTEEC+E L A++ +P+S I L K A +++L++ S G RL LA + + G + AAE + I+ ++ +P A L LY + G A V++ A+ G + E +A + W++ + Y AA+ Y ++LE +D + R+++ A+LV+A S+ D+ +E + LP ++ G +DP ELE + P S+R+ D ++ ER+R K E++ R+RAKRR+ ++ KL + + + + + PDPERWIPR RS+GKRG++ RN+FVGAQG+G G KDA KLDA A+A ++ D P +V+ I K K+R
Sbjct: 22 LKRENYSRAVDICNKIRSKLPDDVDAVKVKCVALIRLEKFDKALELAV--KYDFLSTEKAYCLYRLKQDDDALKLL--GGGDL--ETQSTAQL-HLAAQLHFRKGDYDQSIRIYELLLS-----RGPEGDDLLELQTNLLAAYASAGRSQELKDREIPIDD-------GFEVAFNKSFVAIQSS----------DWEAAEELLLTAERLCCDTFVAEGASEAEIEEEVAVIKTQLAYVKQMRGNLDDALSDYRNVLKLKLRNRAVGAVASNNIVTIRQDRDVLDSFKRLKNIDTAVLSDKLNPTQQEAILTNRTLLLCLMNKTEECRESLEALKKQFPASKSIADIVVLLAIKDQSPG-------AAIEQLQDDMSVGG----RLGLAHVYLTEGHVLKAAECIRSIEELAHSPGTVATLVALYEQAGDSASAQAVLERALIHHRAGNYTSE---QAMKIREGDCWYKIQKKQYREAADAYLELLEGETAGAMDRDLRLRSMASLVVALSFCDAEAAEARCAMLPAVEESG----VDPSELEK-QAPRSNRLA-AKFADTGDKKNERKRA-AKSPESIARKRAKRREAHLTKLRSRPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKDALKLDAAARAARKAESDKPAAVVVSSDSGIRKSKKKKR 654
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A2D4BMZ3_PYTIN (Signal recognition particle subunit SRP72 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMZ3_PYTIN) HSP 1 Score: 242 bits (617), Expect = 2.710e-66 Identity = 225/662 (33.99%), Postives = 338/662 (51.06%), Query Frame = 3
Query: 213 VQECLRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALL----GMADWFQGEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA 2174
+Q L E++ +AI++CN +RSK+PDD DA+++KC+ LI + ++KAL+ ++ K AL + ERAYC++RL R ++AL + G S T A RHL AQ YR G +AQA ++ +E RG+ + NL AAYA+AG++ E R PV+D +WE+ +N ++ G AA+ L AE C E +A + + +E + V Q A+ + + G AA+ + +++ + ++ AV V+T N+ + +D ++LKRL + + L P Q EA N+ LLL K EEC+ L+ ++ +P + LA I L K A +EA L G RL LA L + A AAE LE I I TP A L LY G A V+Q A++ H + R+ + + G + + Y AA+ Y ++LE +D + R+ + A+LV+A S+ D+A +E + LP + E DP ELE S KL D ++ ER+R K+ E + R+RAKRRD ++ KL + + +P + PDPERWIPR RSY KRG++ RN+FVGAQG+G G KDAAKLDA A+A
Sbjct: 10 LQAALSRENYARAIEICNKIRSKTPDDQDAVKIKCVALIRLEKFDKALE-LAVKYPALAA-ERAYCLYRLKRDDDALQLL--GAAS-------TPAQRHLAAQIHYRKGQYAQAIDLLL----QEATGRGE---DLTELHANLLAAYASAGRSQELEHRDIPVDD-------SWEVAFNKSFTAIE-TGDWSAADAH---------LSDAERLCREMLEADGVSAAEMENELAPVRVQKAFVKQMQGDHDAALAEYRAVLKLKLTNQAVGAVATNNIVAIRNDRDLLDSLKRLKALDAVVQSDKLTPVQQEAILANRALLLALLNKPEECRAALQTLQAQFPHARLASEITVLLAVKDHH---ADGAIEALQGNLSLGG--------RLGLAHLYLAQRQPARAAECLESIAEIQHTPGTVATLVALYDAAGNSASAQRVLQRALD------HHRAVDFRSPSAMKIREGDCSYKIQKKQYQAAADAYLELLEGESAGAMDPDLRLHSLASLVVALSFCDAAAAEMRSVLLPPVPEC----ETDPAELEQQAQRSSRLASKLA--DVGDKKNERKRA-AKNPERIARKRAKRRDAHLEKLRSRPDYNPTIGLINPDPERWIPRKQRSYAKRGRRGRNRFVGAQGAGMGTDKDAAKLDAAARA 612
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A3F2RYS3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYS3_9STRA) HSP 1 Score: 245 bits (625), Expect = 2.210e-65 Identity = 221/686 (32.22%), Postives = 354/686 (51.60%), Query Frame = 3
Query: 225 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTR-RTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVA-SLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMAD-WFQ-GEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 2252
L+ E++ +A+ +CN +RSK PDD+DA++VKCL LI + ++KAL+ + LS E+AYC++RL + +EAL + + GD +T A HL AQ +R G + Q+ IY + + E GD + NL AAYA+A ++ E R P++D +E+ +N +Q +G AAE L AE C E A +E + +E +++ +QLA+ + + G A+ + +++ + + AV V++ N+ + D ++ KRL + + L Q EA N+ LLL KTEEC+E L ++ +P S I L K A A +++L+ GDV+ RL LA + + G + AAE + I+ ++ TP A L LY E G A V++ +E ++ E ++ + D W++ + Y AA+ Y ++LE LD + R+++ A+LV+A S+ D+ +E + LP ++ G +DP ELE E P S+R+ DK ++R+ K E++ R+RAKRR+ Y+ L A + + + + PDPERWIPR RS+GKRG++ RN+FVGAQG+G G KDA KLDA A+A ++ D P +V+ G I K K+R
Sbjct: 310 LKRENYSRAVDICNKIRSKLPDDVDAVKVKCLALIRLEKFDKALELAV--KYDFLSTEKAYCLYRLKQDDEALAL-------LNGDLETQTTAQLHLAAQLQFRKGDYDQSIRIYELLLSHAQE--GD---DLLELQTNLLAAYASADRSEELKDREIPIDD-------GFEVAFNKSFVAIQ-SGDWAAAE---------DLLATAERLCRETFAAEGASEAEIEEEVAVIKTQLAFVKQMRGDLDGALSDYRNVLKIKLRNRAVGAVASNNIVAIRKDHDVLDSFKRLKNIDTAVLSEKLSLTQQEAILTNRTLLLCLLNKTEECRESLETLKKKFPESKSIADIVVLLAIKDQSPAVA-------IEQLQ-----GDVSVGGRLGLAHVYLTEGHVLKAAECIRSIEQLAHTPGTVATLVALYEEAGDSASAQTVLKSTLEHHRASDYTSEQAMKVRE----GDCWYKIQKKQYREAADAYLELLEGETAGALDRDLRLRSMASLVVALSFCDTEAAEARCTMLPTVEESG----VDPSELEK-EAPRSNRLAVKFAEDKKNERKRA----AKSPESISRKRAKRREAYLTNLRARPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKDALKLDAAARAARKAESDKPAAVVVTSGSGIRKSKKKKR 939
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: A0A0P1ATR4_PLAHL (Signal recognition particle subunit SRP72 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATR4_PLAHL) HSP 1 Score: 235 bits (599), Expect = 1.250e-63 Identity = 215/683 (31.48%), Postives = 345/683 (50.51%), Query Frame = 3
Query: 225 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMYAEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKR-FPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYP-SSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKA--QSRRDMPEKIVLPPGIVIGKRAGKRR 2252
++ E + +A+ +CN +RSK PDD+DA++VKCL LI + ++KAL+ + L E+AYC++RL + EAL EG + T + HL AQ +R M+ Q+ IY + ++ E + + NL AAYA+A ++ E R PV++ +E+ YN +Q + + AE L AE + +A + +A +E +I+ +QLAY + + G A+ + I++S+ + AV LV++ N+ T+ +D ++LKRL S + L P Q EA N+ LLL KTEEC+E L ++ +P S +A + ++ Q + +++L+ S G RL LA + G + AAE + ID ++ TP A L +Y ++G A V++ A+ A + E K G + + Y A + Y ++LE +D + R+++ A+LV+A SY+D+ +E + LP MD ELE + P S R+ D +R ER+ + K EA+ R+RAKRR+ ++A L A + + + PDPERWIPR RS+GKRG++ RN+FVGAQG+G G KDA KLDA A+A ++ D P +++ I K K+R
Sbjct: 22 IKGEHYSRAVDICNKIRSKFPDDMDAVKVKCLALIRMEKFDKALELAV--KYEYLDTEKAYCLYRLKQDAEALKTI-EGRDIQSLSTE----MLHLAAQLYFRNEMYDQSIRIYELLLSQAKENDNLLE-----LRTNLLAAYASASRSKELKSRQIPVDE-------GFEVAYNKSFVFIQLQ----------DWDKAEELLLTAERFGRDALEADGISGSEAEEEMAIIKTQLAYVKQMRGNLDEALSDYRDILKSKLRNRAVGLVASNNIVTIRKDRDVLDSLKRLKSIDTYMLTEKLNPAQREAILTNRALLLCLSNKTEECRESLEKLKKQFPMSKSIADIVVLLAINDQSPTV--------AIEQLQNDASVGG----RLGLAHVYMVEGHVLKAAECIRSIDQLAHTPGTVATLVAMYEQVGDSASAQAVLESAL--AYHKTLDYKSEYAMKIREGDCWYKIQKKQYREATDAYMELLEGVTAGAMDRDLRLRSIASLVVALSYYDAEAAEARCAMLP----AVKESSMDASELE-SRAPRSIRLA-TKFTDTGDKRNERK-VAAKSPEAIARKRAKRREAHLANLRARPDYNAFIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKDAIKLDAAARAARKAESDKPTAVLVTSSSGIRKSKKKKR 654
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Match: K3X5P8_GLOUD (Signal recognition particle subunit SRP72 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5P8_GLOUD) HSP 1 Score: 234 bits (597), Expect = 2.250e-63 Identity = 207/663 (31.22%), Postives = 335/663 (50.53%), Query Frame = 3
Query: 225 LRNEDFDKAIQLCNSVRSKSPDDLDAIRVKCLCLINQDNYEKALQSVSGKRKALLSPERAYCMFRLGRLEEALDVAREGGRSMAGDTRRTNALRHLEAQALYRLGMHAQAAEIYAEMY--AEEDEKRGDADRGFPAVSVNLAAAYAAAGKAVEALKRFPVEDVMEEEGAAWELLYNLGTALLQRNGSVGAAEVEFEVETAETCLEQAEETCLEGSKAIEQTEDQAADEASIVSSQLAYARAIAGKPAAAVERLQQIVRSRPSDTAVALVSTTNLATLGGFKDSQEALKRLTSAMSENAERGLLPKQLEACRFNKCLLLLQCGKTEECQEELRAVRPMYPSSDLAPRIEAALLSKQGKSAEASAVLEARLKELEEAGSSGDVASLRLCLAQLLASGGDLAAAAETLEGIDAISGTPAASAALARLYVEMGKREKATGVVQEAVEAACRGEHGLEGEVRAKALLGMADWFQGEGLYCRAAETYSKVLE--LGPELDGEKRVQAQAALVIAYSYFDSAKSEEEASKLPYNDDLGSAEEMDPVELEMTELPCSSRVKKLVLVDKASQREERRRLRQKDHEAVLRQRAKRRDKYIAKLIAEGEIDPNKPVPKPDPERWIPRSHRSYGKRGKK-RNKFVGAQGSGDGAAKDAAKLDAHAKAQSRRDMPE 2198
L+ E++ KA+++CN +RS+ PDD+DA+++KC+ LI + ++KAL+ + + LS E+AYC++RL + EEAL + G + + L HL AQ +R G + IY + A+E E + + NL AAYA+AG+A + V++V +E+ +N ++ + + AE L +AE+ C E A +E + +E +++ +QLA+ + + G A+ + +++ + + AV V+ N+ T+ +D E+ KRL + E L Q EA N+ L+L KT+EC+E++ ++ +P S I L K A A ++ L++ S G RL LA + S G A AA+ + I+ I+ TP A + LY G A + A+ A K G + Y A E Y +LE LD E R+++ A+LV+A S+ D+ +E + LP +++P ELE L + + KLV D ++ ER+R K+ E++ R+RAKRR+ ++A L A + + + PDPERWIP+ RS+GKRG++ RN+FVGAQG+G G KDAAKLDA A+A + D+PE
Sbjct: 17 LKRENYAKAVEICNKIRSRYPDDVDAVKIKCVALIRMEKFDKALELAA--KYDYLSTEKAYCLYRLKKDEEALALLPSGLQGHSAT------LLHLAAQLNFRKGNYETCIRIYEHLVSIAQEGEDLME-------LQTNLLAAYASAGRARD------VDEVSIPTDDNYEVAFNKSFISIEAG----------QWDAAEAHLIEAEKLCRETFAAEGSSEAEIDNEVALIKTQLAFVKQMKGDLDGALSDYRNVLKLKLRNQAVGAVAANNIVTIRNDRDLFESFKRLKNINDELLSDKLTVSQQEAILANRALVLCLMNKTDECREQVAQLKKRFPESKTISDIIVFLALKDQSPA-------AAIELLQDDASVGG----RLGLAHVYLSQGQPAKAAKCINSIEEIAHTPGTVATVVSLYEAAGDAAAAQATLDRAI--AFHKARDYSSSHAMKIREGDCSHKIQKKQYQAATEAYLDLLEGENAAALDPELRLRSLASLVVALSFCDAKAAETRSVMLP----AVMESDVEPSELERLALKSNRLLTKLV--DAGDKKNERKRA-AKNPESIARKRAKRREAHLANLRARPDYNATIGLLNPDPERWIPKKQRSHGKRGRRGRNRFVGAQGAGMGTEKDAAKLDAAARAAKKADIPE 628 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.42.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig93.42.2 >prot_A-nodosum_M_contig93.42.2 ID=prot_A-nodosum_M_contig93.42.2|Name=mRNA_A-nodosum_M_contig93.42.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=701bp MDADGMEESVLTPSQKVWRRVQECLRNEDFDKAIQLCNSVRSKSPDDLDAback to top mRNA from alignment at A-nodosum_M_contig93:243907..256153- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig93.42.2 ID=mRNA_A-nodosum_M_contig93.42.2|Name=mRNA_A-nodosum_M_contig93.42.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12247bp|location=Sequence derived from alignment at A-nodosum_M_contig93:243907..256153- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig93:243907..256153- >mRNA_A-nodosum_M_contig93.42.2 ID=mRNA_A-nodosum_M_contig93.42.2|Name=mRNA_A-nodosum_M_contig93.42.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=2103bp|location=Sequence derived from alignment at A-nodosum_M_contig93:243907..256153- (Ascophyllum nodosum dioecious)back to top |