prot_A-nodosum_M_contig93.14.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig93.14.2
Unique Nameprot_A-nodosum_M_contig93.14.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length514
Homology
BLAST of mRNA_A-nodosum_M_contig93.14.2 vs. uniprot
Match: D7G5P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P3_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 4.960e-49
Identity = 143/326 (43.87%), Postives = 191/326 (58.59%), Query Frame = 0
Query:    2 LRSEKAEKTKLQSRNILLEREVETIEIARRRWLRDDASCRSRGSNLERRLAGNTENLRNFLFGAGASVEAQR-VAAPAGSSAKHTARSSVTRSGSPVARRHSHGAAGGRSPLTPSTGKKDVFAEEDGVAGEDCLGYGGD----HALRRVRDTADLERSELRRRHDVELSKQRSRIENIMLELKKMKAERDGYKRASEIQAELLSGVYSELRACLEEIKSRFAMADTRQSNTYPTRDNRDGDDSVDSSAIR-SALARTTQENEEDPHHQVWFCLSSNRGWIHSGSVNVRTFQILLLEAVLDMALRGVIPSTVRAARDSIREGMGRTP 321
            L +E+ EK+ LQ++ +LLEREVE ++ ARRRWLR++AS R RGSNLERRLAGNT NLR FLFGA A  EA R +A    S A  T R S T SGSPVA   +H   GG      +T   ++   E+G    D    GG     +A+RR R+TA+LERSELRRRHDVE++ ++SRIE + LE+++++AERDG K+A+E Q  L    Y+EL+ CLEE+K+           + P   +R   DS      R     R T ++ E     +   L++  G     +  VR  Q LLLEAV       V+P+ V  A DSIR+G+G  P
Sbjct:  338 LHAEQVEKSNLQAKIVLLEREVEGMDFARRRWLRENASNRGRGSNLERRLAGNTGNLRTFLFGADAKPEATRQLATRDASEAPGTFRPSATCSGSPVASSRAHSGVGGA-----ATTASEMSTGEEGD--RDMAAIGGTTAERNAVRRARETAELERSELRRRHDVEMTAKQSRIERLKLEVRRLEAERDGLKQAAETQVGLFKDGYAELKTCLEEMKAH--------GQSPPPDTSRSPADSCSEEQARPGGDGRGTIKSAEGRERWMQTMLATEEGL----NCQVRMLQGLLLEAVSAATPTVVMPAAVTQAVDSIRQGLGLPP 644          
BLAST of mRNA_A-nodosum_M_contig93.14.2 vs. uniprot
Match: A0A6H5KE49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE49_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 8.210e-38
Identity = 128/325 (39.38%), Postives = 173/325 (53.23%), Query Frame = 0
Query:    2 LRSEKAEKTKLQSRNILLEREVETIEIARRRWLRDDASCRSRGSNLERRLAGNTENLRNFLFGAGASVEAQRVAAPAGSSAKHTARSSVTRSGSPVARRHSHGAAGGRSPLTPSTGKKDVFAEEDGVAGEDCLGYGGDHALRRVRDTAD-LERSELRRRHDVELSKQRSRIENIMLELKKMKAERDGYKRASEIQAELLSGVYSELRACLEEIKSRFAMADTRQSNTYPTRDNR----DGDDSVDSSAIRSALARTTQENEEDPHHQVWFCLSSNRGWIHSGSVNVRTFQILLLEAVLDMALRGVIPSTVRAARDSIREGMGRTP 321
            L +E+ EK+ LQ++ +LLERE+E ++ ARRRWLR++AS R RGSNLERRLAGNT NLR FLFGA A  EA R+A    S A  T R S T SGSPVA   +H   GG +                  A E   G  G+  +  + D  D L  S L      ++S ++SRIE + LE++K++AERDG K+A+EIQ  L    Y+EL+ CLEE+K+         S +     +     DG +++ S+  R +  +T    EE  + QV                  R  Q LLLEAV       V+P+ V  A DSIR+G+G  P
Sbjct:  332 LHAEQVEKSNLQAKIVLLEREIEGMDFARRRWLRENASNRGRGSNLERRLAGNTGNLRTFLFGADAKPEATRLATRDASRAPGTFRPSTTCSGSPVASSRTHSGVGGAAA----------------TASEMSTGEEGERDMAAIGDHPDFLSASSLL---VPQMSAKQSRIERLKLEVRKLEAERDGLKQAAEIQVGLFKDGYAELKTCLEEMKAHGQSPPPATSRSLADSCSEEPGGDGRETIKSAEGRESWMQTMLATEEGLNCQV------------------RMLQGLLLEAVSAATPTVVMPAAVTQAVDSIRQGLGLPP 619          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.14.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5P3_ECTSI4.960e-4943.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE49_9PHAE8.210e-3839.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22
NoneNo IPR availableCOILSCoilCoilcoord: 164..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig93contigA-nodosum_M_contig93:71731..76375 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig93.14.2mRNA_A-nodosum_M_contig93.14.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig93 71208..76828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig93.14.2 ID=prot_A-nodosum_M_contig93.14.2|Name=mRNA_A-nodosum_M_contig93.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=514bp
MLRSEKAEKTKLQSRNILLEREVETIEIARRRWLRDDASCRSRGSNLERR
LAGNTENLRNFLFGAGASVEAQRVAAPAGSSAKHTARSSVTRSGSPVARR
HSHGAAGGRSPLTPSTGKKDVFAEEDGVAGEDCLGYGGDHALRRVRDTAD
LERSELRRRHDVELSKQRSRIENIMLELKKMKAERDGYKRASEIQAELLS
GVYSELRACLEEIKSRFAMADTRQSNTYPTRDNRDGDDSVDSSAIRSALA
RTTQENEEDPHHQVWFCLSSNRGWIHSGSVNVRTFQILLLEAVLDMALRG
VIPSTVRAARDSIREGMGRTPQAWPSEFRSLDADLPQSLLVHLGENGLDQ
PENIGKVCDEHRSVDAESAAVMKGTSPLSREVLYHLGQNRPPQHSGGRDQ
TAPAPCVENRLGENDRAGGDLQRTQDKDEAQVVLVDEERIRMSSGGRFPR
KVPAEDCLKEGDVSRDEIVDHSRGPQSAENEAMDSAIAPTQRGSSSGRSP
KEAEAYRCCCCCC*
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