prot_A-nodosum_M_contig9268.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9268.1.1
Unique Nameprot_A-nodosum_M_contig9268.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length48
Homology
BLAST of mRNA_A-nodosum_M_contig9268.1.1 vs. uniprot
Match: D8LFL1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFL1_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.430e-17
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 VTAASDEGRAWFARGWLHILNYNHEEAIECFKHCINVEDTCIMALWGI 48
            +T ++D GRAWFARGW+H+LNYNHEEA ECFK C  V+  C MA WGI
Sbjct:   31 ITVSTDAGRAWFARGWMHMLNYNHEEAAECFKTCTEVDPRCAMAFWGI 78          
BLAST of mRNA_A-nodosum_M_contig9268.1.1 vs. uniprot
Match: A0A2D6JR42_9ARCH (Uncharacterized protein n=15 Tax=Archaea TaxID=2157 RepID=A0A2D6JR42_9ARCH)

HSP 1 Score: 62.0 bits (149), Expect = 5.710e-10
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 VTAASDEGRAWFARGWLHILNYNHEEAIECFKHCINVEDTCIMALWGI 48
            +T ++DE R  + RG+ H+LNYNHE+AI CF     ++ TC MA WGI
Sbjct:   22 ITCSNDEARKMYVRGYGHMLNYNHEQAIACFSKVTELDPTCAMAWWGI 69          
BLAST of mRNA_A-nodosum_M_contig9268.1.1 vs. uniprot
Match: A0A074XXG4_AURSE (Uncharacterized protein n=1 Tax=Aureobasidium subglaciale (strain EXF-2481) TaxID=1043005 RepID=A0A074XXG4_AURSE)

HSP 1 Score: 60.8 bits (146), Expect = 1.460e-9
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 VTAASDEGRAWFARGWLHILNYNHEEAIECFKHCINVEDTCIMALWGI 48
            VT +SDE + WF RG +    +NHEEAIECF+H I+ +  C +A WG+
Sbjct:   17 VTTSSDEAQKWFDRGLIWTYAFNHEEAIECFRHAIDNDVDCALAYWGL 64          
BLAST of mRNA_A-nodosum_M_contig9268.1.1 vs. uniprot
Match: UPI0018DA269D (hypothetical protein n=1 Tax=Thiosulfatihalobacter marinus TaxID=2792481 RepID=UPI0018DA269D)

HSP 1 Score: 54.7 bits (130), Expect = 2.180e-7
Identity = 23/48 (47.92%), Postives = 29/48 (60.42%), Query Frame = 0
Query:    1 VTAASDEGRAWFARGWLHILNYNHEEAIECFKHCINVEDTCIMALWGI 48
            VT +S E + WF RG     NYNHEEA+ CF++    +  C MA WGI
Sbjct:   15 VTTSSPEAQLWFDRGLNWTYNYNHEEAVVCFRNAALADPDCAMAHWGI 62          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9268.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LFL1_ECTSI1.430e-1766.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2D6JR42_9ARCH5.710e-1050.00Uncharacterized protein n=15 Tax=Archaea TaxID=215... [more]
A0A074XXG4_AURSE1.460e-950.00Uncharacterized protein n=1 Tax=Aureobasidium subg... [more]
UPI0018DA269D2.180e-747.92hypothetical protein n=1 Tax=Thiosulfatihalobacter... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9268contigA-nodosum_M_contig9268:5075..5218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9268.1.1mRNA_A-nodosum_M_contig9268.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9268 5075..5218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9268.1.1 ID=prot_A-nodosum_M_contig9268.1.1|Name=mRNA_A-nodosum_M_contig9268.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=48bp
VTAASDEGRAWFARGWLHILNYNHEEAIECFKHCINVEDTCIMALWGI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf