mRNA_A-nodosum_M_contig919.7.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig919.7.1
Unique NamemRNA_A-nodosum_M_contig919.7.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: D7FT77_ECTSI (Aspartate--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT77_ECTSI)

HSP 1 Score: 917 bits (2370), Expect = 0.000e+0
Identity = 489/620 (78.87%), Postives = 537/620 (86.61%), Query Frame = 1
Query:    1 EELAALIEAKGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGS--RSTPEGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAEKEGKAPTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            EELA +IE KG EIR LK   T+KD LKPH+DELL LK KFQ+TTG  YVAPGQEKK KP  A+ PA         DPNKK       XXXXXXXXXXXXXXXXXXXXX               GGS   STPEGQEWRYGDLP++QSSEMTGK F  +G+LT+ KAG+E+ LR RVH SRSIK+GVFLVLRQ+LYTVQATVFVGGNVGRPMV YAE++SKESV+DV+G L +TP+PVSGCTQK++ELK+EEIHVVS+ADTF+P+IVADAMRPD TPEEEEK EKEGKAPTVAADTRLD+RWIDLRTPANQAIFKIQSAVC+YFR NLASKGFVEIHSPKLLAGASEGG+EVF T+YFG  ACLAQSPQL+KQMAAACGGF RVME+GPVFRAEKSRTHRHLCEFTGLDFEMVIKEHY+EVLEVFSDLFI IFDE+NRNCKEE+EAVR QHPFEDLRYARPTLR++FQEGIQLL +AG+DADP  DLSTE+EKKLGDLVA+K+GTDFFMMDKYPL+ RPFY+MPCP NPKHSNSFDIFIRGEEIVSGAQR+HDL  L ERA+   IPL+ I SYL AFKHGAEPHGGGGIGLERV+MLFLGLKNIRKTSMFPRDPKRCAP
Sbjct:    8 EELAVMIEDKGNEIRQLKFAKTSKDDLKPHIDELLALKTKFQSTTGAPYVAPGQEKKTKPAPAATPAAP------VDPNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXGGSAHESTPEGQEWRYGDLPMVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRSIKKGVFLVLRQALYTVQATVFVGGNVGRPMVQYAEDVSKESVIDVRGTLVVTPSPVSGCTQKEVELKIEEIHVVSAADTFMPVIVADAMRPDRTPEEEEKQEKEGKAPTVAADTRLDYRWIDLRTPANQAIFKIQSAVCQYFRANLASKGFVEIHSPKLLAGASEGGSEVFTTNYFGTEACLAQSPQLYKQMAAACGGFGRVMEVGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYFEVLEVFSDLFINIFDEVNRNCKEELEAVRTQHPFEDLRYARPTLRLTFQEGIQLLIDAGYDADPLGDLSTEHEKKLGDLVAEKYGTDFFMMDKYPLDVRPFYTMPCPSNPKHSNSFDIFIRGEEIVSGAQRIHDLEFLKERAREHDIPLDSIMSYLDAFKHGAEPHGGGGIGLERVVMLFLGLKNIRKTSMFPRDPKRCAP 614          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: A0A835Z5D4_9STRA (Aspartate--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5D4_9STRA)

HSP 1 Score: 635 bits (1637), Expect = 1.400e-217
Identity = 370/635 (58.27%), Postives = 437/635 (68.82%), Query Frame = 1
Query:    1 EELAALIEAKGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGSRSTPEGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVG-GNVG--RPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAEKEGKA--------------PTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            EEL A I  KG EIR  K  G  KD +K  V ELL LK+K+Q  TGE YVAPG++                         K K + ++XXXXXXXXXXXXXXXXXXX  +AE  A+      +   S+S   G E  Y    +I+  E  G++             Q + LR RVH +RS+ +G FL+LRQ L TVQA +F G G  G  +  V YA  IS+ESVVD+ G + L P PV   TQ  IE+ VEEIHVVS+A   LPL+V DA RP+    E E+    G A              P V A T LD+RWIDLRTPANQ+IF+IQS VC+ FRD LA++GFVEIHSPKLL GASEGG+ VF  DYFG PACLAQSPQL+KQM AACGGFE+V E+GPVFRAE S THRHLCEFTGLD EM IKEHYYE LE+F +LF++IFD +N     E+ A+ QQ+PFE L+Y RPTLR+S+ EG++LL++AG+DA+P +DL TE EK LG +V +KFGTDFF+MDKYPL ARPFY+MPCP +P  SNSFDIFIRGEEIVSGAQRVHD+ LLIERAK   IPL  I SYL AF+HGAEPH GGGIGLERV+MLFLGLKNIRKTSMFPRDPKR AP
Sbjct:    5 EELVAAITDKGAEIRNAKTSGADKDAVKALVGELLALKSKYQEVTGEEYVAPGEQ-----------------------GSKDKSKAKKXXXXXXXXXXXXXXXXXXXAKKAERMAQKEQANQKAKASKSAGGGSERAYH--AVIELGEAMGRRE------------QRVWLRARVHTTRSVGKGAFLLLRQGLATVQAILFAGKGGAGITKDAVKYASGISRESVVDICGTVKLAPVPVESATQSLIEVHVEEIHVVSAAMARLPLLVEDASRPE---GEGEEGGAGGDAAAXXXXXXXXAHVGPRVTASTALDYRWIDLRTPANQSIFRIQSGVCQLFRDYLAARGFVEIHSPKLLGGASEGGSNVFTLDYFGSPACLAQSPQLYKQMTAACGGFEKVFEVGPVFRAENSNTHRHLCEFTGLDLEMTIKEHYYEALELFGELFVHIFDRINERYAAELAAIGQQYPFEPLKYCRPTLRLSYYEGMKLLQDAGYDANPAEDLPTEQEKALGRIVREKFGTDFFIMDKYPLAARPFYTMPCPHDPNLSNSFDIFIRGEEIVSGAQRVHDVDLLIERAKWWQIPLASIGSYLDAFRHGAEPHAGGGIGLERVVMLFLGLKNIRKTSMFPRDPKRIAP 599          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: A0A7S2BEX1_9STRA (Aspartate--tRNA ligase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BEX1_9STRA)

HSP 1 Score: 616 bits (1588), Expect = 4.420e-210
Identity = 348/609 (57.14%), Postives = 421/609 (69.13%), Query Frame = 1
Query:   28 KGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGSRSTPEGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAEKEGKAPTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            KG+ IR LK+       +K  V +LL LKA+F+T TG+ YVAPGQ   KK           +G +   P  K   ++  XXXXXXXXXXXXXXXXXXXXX            L   G+ +T E     +GD PLI S EMT K + +I  L+ E A  E  +R R+H SR   +G F +LRQ LYTVQ  +F G NV + MV Y  EI  ESVVD++  + + P  +   TQ  +EL V E+HV+S A   +P  + DA RPD         ++ G    V  DTRL++RW+D RTPANQAIF I S V   FR+ L  +GFVEIH+PK+  GA+EGGAE+F  DYF Q ACLAQSPQL+KQM AACGGFE+V E+GPVFRAE S THRHLCEFTGLD EM  KEHYYEVL+VFSDLFI+IFD+LNR  ++E+E +R QHPFEDL++ +P+LR+SF EG+ +L  AG   DP  DLSTENEK LG LV  K+ TDFFMMDKYPL ARPFY+MPCP NP+ SNS+D FIRGEEI+SGAQR+HD+ L++ERAKA GIP  GI SY+ AFKHGAEPHGGGG+GLERV+MLFLGLKNIRK SMFPRDP R  P
Sbjct:   21 KGDSIRELKSNKADVSAIKAAVADLLALKAEFKTVTGKDYVAPGQGSSKKKK---------KGGDGGAPKPKEXXEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XELAAQGTAATVESDASLFGDAPLITSHEMTDKVWVDIKNLSPEMADVERYVRGRMHVSRKQGKGCFFLLRQGLYTVQGVLFQGKNVSKQMVAYLAEIPPESVVDIRAVIRVAPELIKAATQSSVELHVLEVHVISKAAP-VPFQLDDAARPD--------GDESGAG--VGQDTRLNYRWVDTRTPANQAIFNITSGVGGLFREFLHKRGFVEIHTPKINMGAAEGGAEIFHVDYFNQKACLAQSPQLYKQMVAACGGFEKVYEVGPVFRAENSNTHRHLCEFTGLDMEMTFKEHYYEVLQVFSDLFIFIFDQLNRRYRDELETIRAQHPFEDLKFLQPSLRLSFAEGVAMLNEAGFSQDPNGDLSTENEKALGKLVKDKYDTDFFMMDKYPLAARPFYTMPCPENPEASNSYDFFIRGEEIMSGAQRIHDVALIVERAKAHGIPEAGIQSYIDAFKHGAEPHGGGGVGLERVVMLFLGLKNIRKASMFPRDPTRLTP 606          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: A0A7S3XT61_HETAK (Aspartate--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT61_HETAK)

HSP 1 Score: 613 bits (1582), Expect = 1.550e-209
Identity = 350/619 (56.54%), Postives = 433/619 (69.95%), Query Frame = 1
Query:    1 EELAALIEAKGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGSRSTPEGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAEKEGKAPTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAG-HDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            EE+ A I  KG+EIR  K  G + D +   V EL  LK +++  TG+ +   G+  K KP                        Q +RXXXXXXXXXXXXXXXXXXX  QA   A                   +  YGD PLI SS +TG+ F  I ++   +A QE+ +R RVH SR + +G FL+LRQ+LYTVQ T+F G  V + MV YA  + +ES++D++G++ + P+P+   TQKD+EL++ EI  VS     LP  + DA RP      E KAE+EG A TV  D RLD+RWID RT ANQAIF+IQS VC  FR+ LAS+GFVEIHSPKLL GASEGG++VF   YF QP+CLAQSPQL+KQM AACG F+RVME+GPVFRAE S T+RHLCEFTGLD EM I EHYYEVLEVFS+LFI+IFD LN     E+ AV +QHPFE L+Y+RP+LR++F EGI+LL++AG  D DP  DLSTENEK+LG +V + +GTDFF+MDKYPL  RPFY+MPCP N + SNS+D+FIRG+EIVSGAQR+HD+ LL+ERA    IPL+ I SYL AF+HGA+PHGGGGIGLERV+MLFLGL NIRKTS+FPRDP+R  P
Sbjct:   14 EEIEAAITVKGDEIRAEKQAGKSNDDVAALVAELKELKVQYKNVTGKEH---GKVDKAKPKGG---------------------QDERXXXXXXXXXXXXXXXXXXXDAQASSEA-------------------DENYGDYPLINSSGLTGRVFLRIHQIDKSRADQEVWVRARVHTSRGVGKGCFLLLRQTLYTVQCTMFQGEGVSKGMVKYATALPRESIIDIRGKVVVAPSPIDSATQKDVELQILEIRCVSRVIAELPFQIEDASRP------EGKAEEEGMA-TVGQDLRLDYRWIDTRTLANQAIFRIQSGVCALFREFLASRGFVEIHSPKLLGGASEGGSDVFELSYFNQPSCLAQSPQLYKQMTAACGDFDRVMEVGPVFRAENSNTNRHLCEFTGLDLEMAITEHYYEVLEVFSELFIFIFDGLNERYSAELAAVNEQHPFEPLQYSRPSLRLTFAEGIKLLQDAGVADVDPLGDLSTENEKRLGAIVKEMYGTDFFIMDKYPLAVRPFYTMPCPDNAELSNSYDMFIRGQEIVSGAQRIHDVDLLVERANFWQIPLQSIHSYLDAFRHGAQPHGGGGIGLERVVMLFLGLTNIRKTSLFPRDPRRLFP 582          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: W7TVH3_9STRA (Aspartate--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVH3_9STRA)

HSP 1 Score: 601 bits (1550), Expect = 2.380e-204
Identity = 324/624 (51.92%), Postives = 415/624 (66.51%), Query Frame = 1
Query:    1 EELAALIEAKGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGSRSTPEG------QEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAEKEGKAPTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            EE+ ALI+AKG+EIR LKAE + KD +   V  L  LKAK++ TTGE +  P    KKK  A         G +  DP K +K+                         QA  T+                        +  +YG+LP++QS  MT + +  I  L+  +AGQ + LR R+H SR++ +GVFL+LRQ + TVQA V+ G  V + MV +A  + +ESV+D+ G L     PV   T + +E++V+E++VVS+A+  LP  + DA RP+        A ++ + P+V  D RL++RWID RT ANQAIF+IQ  V + FR+ L+ +GFVEIH+PKLL GASE G+ VF   YF Q  CLAQSPQL+KQMA ACGGFE+V E+GPVFRAEKS THRHLCEFTGLD EM I EHYYEVLE+FSDLFIYIFD L      E++AV +QHPFE L++ RP+LR+SF EG+ LLR AG+DA   +DL TE EK LG +V +K+ TDF+MMD+YPL  RPFY+MPCP +P  SNSFD+FIRGEEIVSGAQR+HD+ LL ER  A G+P E + +Y+ AF+HGA PHGGGGIGLERV+ML+LGLKNIRKTS+FPRDPKR AP
Sbjct:    5 EEIEALIKAKGDEIRQLKAEKSEKDTILAQVALLNELKAKYKETTGEDFGPPPSSSKKKGEAKKTDGAPACGLKV-DPRKAAKEARAAKRAAGGVD-------------QATSTSSXXXXXXXXXXXXXXXXXXXXXXLESAKYGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPE--------ASEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: A0A7S2RWB9_9STRA (Aspartate--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWB9_9STRA)

HSP 1 Score: 591 bits (1523), Expect = 1.510e-200
Identity = 335/619 (54.12%), Postives = 418/619 (67.53%), Query Frame = 1
Query:    1 EELAALIEAKGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGSRSTPEGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAEKEGKAPTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGH-DADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            E++ A I A G+EIR +K  G TKD +   V  L  LK +++  TG+ Y  P  +  KK                 + +K +KK+ +      XXXXXXXXXXXXX   +AE+                       +YGD PL+QS+ +T + + ++ +L    AG E  +R RVH SR   +G FL+LRQ   TVQ  +F G  V   MV YA  ISKESVVD++  +A  P P++  T+  +EL + EIH +S +   LP  + DA R D             +  TV  DTRL++RW+D RTPANQAIF+IQS +   FR+ + S+GF EIH+PK+L GASEGG+EVF   Y G+PACLAQSPQL+KQM AACGGFERV E+GPVFRAE S THRHLCEFTGLDFEM   EHYYEVL+VFSDLFI+IFD+LN   K E+EA+R QHPFEDL++ RP+LR++F EGI+LL++AG+ +ADP++DL+TE EK LG +V +KF TDFFMMDKYPL+ RPFY+MP P NPK SNS+D+FIRGEEIVSGAQR+HD+ LL ERA    IP  GI SYL AFK GA PHGGGGIGLERV MLFLGLKNIRK SMFPRDP+R AP
Sbjct:    6 EDIVAKITAAGDEIREMKKAGATKDEIMAKVAVLNGLKDEYEQATGKKYANPAAQGSKKDXX-----XXXXXXXXXENSKNAKKEARIKAKEEXXXXXXXXXXXXXKAKEAEND-------------------DATKYGDSPLVQSAFITDRVWVDLPDLNEGLAGSERYIRARVHTSRKQGKGCFLLLRQGFDTVQGVLFQGKGVSAAMVAYAAAISKESVVDIRASIATPPEPIASATKSMVELHILEIHAISRSAP-LPFDLEDASRAD-----------GAEGVTVNQDTRLNYRWVDTRTPANQAIFRIQSGISNLFREFMYSRGFTEIHTPKILGGASEGGSEVFTLSYMGRPACLAQSPQLYKQMCAACGGFERVFEVGPVFRAENSNTHRHLCEFTGLDFEMAFHEHYYEVLQVFSDLFIFIFDQLNIRYKNELEAIRAQHPFEDLKFCRPSLRLTFAEGIKLLQDAGYTEADPDEDLTTELEKALGRIVKEKFDTDFFMMDKYPLKIRPFYTMPDPENPKLSNSYDLFIRGEEIVSGAQRIHDVELLKERAAWWEIPEAGIQSYLDAFKFGALPHGGGGIGLERVAMLFLGLKNIRKASMFPRDPQRLAP 588          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: A0A7S2ERB4_TRICV (Aspartate--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ERB4_TRICV)

HSP 1 Score: 588 bits (1517), Expect = 2.940e-199
Identity = 337/629 (53.58%), Postives = 427/629 (67.89%), Query Frame = 1
Query:    1 EELAALIEAKGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGSRSTPEGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFV--GGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDL---------TPEEEEKAEKEGKAPTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            EEL A I   G +I+  KA+   K+   P ++++   KAKF+  TG+ +  P +E         P        EA+D NK  ++    XXXXXXXXXXXXXXXXXXX     D   G   T                +GD P+++S E+T KK++ +G+L    AG E+ +R  +  +R++ +G F+++R SLY+VQ   F    G + + MV Y   +  ES+VDVKG L +   P+   TQK +E++V EIH +S A   +P  + DA RPD          T EEE+KA  +G  P V  + RLD+RWIDLRTPANQ+IF+I+S V + FR++L +KGFVEIH+PKL+ GASEGG+EVF  DYFG+PACLA SPQL KQM AAC GFE+V E GPVFRAE S T RHLCEFTGLD EM I EHY EVLEVFSD+FI +FD +N  CK E+E VR+QHPFEDL+Y RPTL+I++ EG +LLR+AG D    DDLSTENEKKLGD+V +K+GTDFF MDKYPL  RPFY+MP P N   SNS+D FIRG+EI+SGAQR+HD  LLIERAKA  IPLE I++Y+ +F++GA PHGGGGIGLERV+MLFL L NIRK S FPRDPKR +P
Sbjct:    9 EELTATIADLGAKIKAAKADKKPKEEWAPILNDMQAAKAKFKEVTGKDFGPPKEEXXXXXAPQQP-------QEASDKNKAKREAKAXXXXXXXXXXXXXXXXXXXXAKLKADRLAGVGAT---------------NFGDAPMVRSGEVTSKKWTMVGDLKPNLAGTEVLIRGHLQTARNVGKGAFVLVRSSLYSVQCVCFETKDGTISQAMVKYMAALPPESIVDVKGTLTVPDQPIEAATQKMVEIQVSEIHCISKAAVNMPFQMEDACRPDAFKETAYGAYTGEEEQKAADDGM-PRVGQEMRLDYRWIDLRTPANQSIFRIESMVGQMFRESLLAKGFVEIHTPKLIGGASEGGSEVFTLDYFGRPACLAMSPQLHKQMTAACSGFEKVFETGPVFRAENSNTRRHLCEFTGLDLEMAIHEHYDEVLEVFSDMFIAMFDGINERCKNELERVREQHPFEDLKYLRPTLKITYAEGCKLLRDAGVDQGDLDDLSTENEKKLGDIVKEKYGTDFFFMDKYPLAVRPFYTMPDPNNKDLSNSYDFFIRGQEILSGAQRIHDPDLLIERAKAWEIPLEEISAYVDSFRNGAMPHGGGGIGLERVVMLFLDLPNIRKASWFPRDPKRLSP 614          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: A0A7S2K8Z0_9STRA (Aspartate--tRNA ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8Z0_9STRA)

HSP 1 Score: 570 bits (1469), Expect = 4.060e-192
Identity = 326/628 (51.91%), Postives = 415/628 (66.08%), Query Frame = 1
Query:    1 EELAALIEAKGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGSRSTPEGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAE--KEGKAPTVAAD--------TRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            EE+   I   G  I+  KA    K+   P + E+L LK KF+  TG+ +  P +EKK+K                 +  +K       XXXXXXXXXXXXXXXXXX   + E   K     L+  G  +        +GDLP++QS EMT KK++ I +L    AG+++ +R  +  SR + +G F+++R SLYTVQ   F   +V   MV Y   +  E+VVD+KG++ +   P+   TQK +E+++   H V+     +P  + DA RPD   E +  A   K+     VAAD         RLD+RW+DLRTPANQ+IF+I+S V   FR+ L  KGFVEIH+PK+++G+SEGG++VF  DYFG  ACL+ SPQL KQMAAAC GFERV E GPVFRAE S T RHLCEF G+D EM IKEHY EVL+VFSDLFIYIFD LN  CK E+E VR+QHPF DL+Y RPTL+I++ EG  LLR AG + D  +DLSTENEKKLGD+V +K+ TDFF MDKYPL  RPFY+MP P NPK SNS+D FIRG+EI+SGAQR+H+  LL ERAKA  IPLE I +Y+ +F++GA PHGGGGIGLERV+MLFLGL NIRK + FPRDPKR +P
Sbjct:    5 EEITQQIATLGNAIKDAKAAKKPKEEWDPLLQEMLALKTKFKEVTGKDFGPPPKEKKEK----------------KENTQKXXXXXXXXXXXXXXXXXXXXXXXXXNRLEREAREKAKADKLKGVGMDT--------FGDLPMVQSKEMTDKKWTEINDLKPNLAGKDVLVRGHLQTSRLVGKGTFVLIRSSLYTVQGVCFESKDVPAAMVKYIANLPSEAVVDMKGKVTVPDQPIESATQKMVEIQISSFHCVNKPSAAMPFQMEDACRPDFEKESDVGAYLGKDEDQDKVAADGLVRVGQELRLDNRWLDLRTPANQSIFRIESMVGHLFRECLMQKGFVEIHTPKIISGSSEGGSDVFKLDYFGNEACLSMSPQLHKQMAAACSGFERVFETGPVFRAENSNTRRHLCEFNGMDMEMAIKEHYDEVLDVFSDLFIYIFDGLNERCKNEVERVREQHPFADLKYLRPTLKITYAEGCALLREAGVEQDDYEDLSTENEKKLGDIVKEKYDTDFFFMDKYPLAVRPFYTMPDPANPKLSNSYDFFIRGQEILSGAQRIHEPELLEERAKAWEIPLESIKAYVDSFRNGALPHGGGGIGLERVVMLFLGLPNIRKAAWFPRDPKRLSP 608          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: A0A1E7FID9_9STRA (Aspartate--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FID9_9STRA)

HSP 1 Score: 567 bits (1462), Expect = 4.450e-191
Identity = 329/628 (52.39%), Postives = 415/628 (66.08%), Query Frame = 1
Query:    1 EELAALIEAKGEEIRTLKAEGTTKDVLKPHVDELLMLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQLQRXXXXXXXXXXXXXXXXXXXXXQAEDTAKGSPLTLRTGGSRSTPEGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAEKEGK----------APTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            EE+ + I   GE+I+  K E  T++     +  +L LK +F+  TG  Y  P +EKK K          G  TEA+D NK+       XXXXXXXXXXXXXXXXXXX     D   G                    +GD PLI+S  +T + +++I  LT +    ++ +R  +  SRS+ +GVF+ +R ++YTVQ   F G  +   M+ Y   +  ES+VDV+G +++   P+  CTQK +EL++     V+ +   +P  + DAMRPD   +E +    EG            PTV  + RLD+RWIDLRTPANQ IF+I+S V   FR  L  +GF+E+HSPKLL G+SEGGA+VF  DYF Q ACLA SPQL KQ   AC GFE+V   GPVFRAE S T RHLCEFTG D EMVIKEHY EVL+VFSDLFI+IFD LN+ CK EIEAVR+QHPFEDL+Y  PTL++++ EG  LLR+AG D D  DDLSTENEKKLGDLV++K+GTDFF MDKYPL  RPFY+MPCP NPK SNS+D FIRG+EI+SGAQR+H   LL ERAKA G+ L+   +YL++FK+GA PHGGGGIGLERV+MLFLGL NIRK + FPRDPKR +P
Sbjct:    6 EEITSEIAVLGEKIKQAKIEKKTQEFWGEFLQSMLALKTQFKELTGTDYGPPPKEKKVK--------NEGSVTEASDKNKEXXXXXXXXXXXXXXXXXXXXXXXXXXEKAKADKLSGVGAD---------------NFGDTPLIKSEFVTNRTWTSIENLTPQLNTSKVLIRGFLQTSRSVGKGVFVKIRSTMYTVQGVCFTGTEISPDMIKYISGLPVESIVDVEGVVSIPNEPIDSCTQKMVELQITSFKCVTRSIQPMPFQMEDAMRPDCE-KESDVGHYEGNDSLANKRSDGLPTVGLENRLDYRWIDLRTPANQGIFRIESMVGVLFRGLLVDRGFIELHSPKLLKGSSEGGADVFTLDYFDQKACLAMSPQLQKQQVCACAGFEKVFVTGPVFRAENSHTRRHLCEFTGFDMEMVIKEHYDEVLDVFSDLFIHIFDGLNKRCKTEIEAVREQHPFEDLKYLNPTLKLTYAEGCALLRSAGVDQDDYDDLSTENEKKLGDLVSEKYGTDFFFMDKYPLSVRPFYTMPCPKNPKLSNSYDFFIRGQEILSGAQRIHTTDLLEERAKAWGVDLDD--AYLNSFKNGALPHGGGGIGLERVVMLFLGLPNIRKAAWFPRDPKRLSP 607          
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Match: A0A7S1D4Z3_CYCTE (Aspartate--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4Z3_CYCTE)

HSP 1 Score: 561 bits (1447), Expect = 2.990e-190
Identity = 283/497 (56.94%), Postives = 356/497 (71.63%), Query Frame = 1
Query:  394 EGQEWRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGVFLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTPVSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKA----------EKEGKAPTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIHSPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEIGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELNRNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDLSTENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDIFIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGGGGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP 1854
            +GQ+  +GD  ++QS E+T + ++ I  L    AGQ + +R  +   R + +G F ++R +LY+VQ   F   +V + MV+Y   +  ESV+D+KG + +   PV   TQK +E+++ + H VS     LP  + DA RP+   E +  A          E+E     V    RLD+RW+DLRTPANQAIF+I+S V   FR+ L  KGFVEIH+PKL++GASEGG+EVF  DYFGQPACL+ SPQL KQM AAC GFERV E GPVFRAE S T RHLCEFTG+D EMVI EHY EVL+VFSDLFIYIFD +N  CK E+E VR+QHPFEDL Y RPTL++++ EG  +LR AG D D  +DLSTENEKKLG+LV +K+GTDFF MDKYPLE RPFY+MP P NPK SNS+D FIRG+EI+SGAQR+H+  L+ ERAKA GI LE I SY+++F++GA PHGGGGIGLERV+MLFLGL NIRK + FPRDPKR  P
Sbjct:   16 KGQD-NFGDAKMVQSHEITDRVWTPIKNLVPSLAGQNVLVRGHLQTVRVVGKGAFCLVRSALYSVQGVCFQSADVSQAMVNYIGGLPTESVIDMKGTVTVPDQPVESATQKMVEIQITDFHAVSKTKASLPFQMEDACRPESGKETDVGAYNEDDEVAAGEEEDGIIRVGQKMRLDYRWLDLRTPANQAIFRIESMVGCLFRECLVKKGFVEIHTPKLISGASEGGSEVFTLDYFGQPACLSMSPQLHKQMCAACSGFERVFETGPVFRAENSNTRRHLCEFTGMDLEMVINEHYDEVLDVFSDLFIYIFDGINERCKSELERVREQHPFEDLTYLRPTLKLTYAEGCAMLREAGVDQDDYEDLSTENEKKLGELVKQKYGTDFFFMDKYPLEVRPFYTMPDPENPKLSNSYDFFIRGQEILSGAQRIHEPDLIEERAKAWGISLEDIESYINSFRYGAAPHGGGGIGLERVVMLFLGLPNIRKAAWFPRDPKRLTP 511          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig919.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT77_ECTSI0.000e+078.87Aspartate--tRNA ligase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835Z5D4_9STRA1.400e-21758.27Aspartate--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2BEX1_9STRA4.420e-21057.14Aspartate--tRNA ligase n=2 Tax=Dictyocha speculum ... [more]
A0A7S3XT61_HETAK1.550e-20956.54Aspartate--tRNA ligase n=1 Tax=Heterosigma akashiw... [more]
W7TVH3_9STRA2.380e-20451.92Aspartate--tRNA ligase n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S2RWB9_9STRA1.510e-20054.12Aspartate--tRNA ligase n=1 Tax=Rhizochromulina mar... [more]
A0A7S2ERB4_TRICV2.940e-19953.58Aspartate--tRNA ligase n=1 Tax=Trieres chinensis T... [more]
A0A7S2K8Z0_9STRA4.060e-19251.91Aspartate--tRNA ligase n=1 Tax=Leptocylindrus dani... [more]
A0A1E7FID9_9STRA4.450e-19152.39Aspartate--tRNA ligase n=1 Tax=Fragilariopsis cyli... [more]
A0A7S1D4Z3_CYCTE2.990e-19056.94Aspartate--tRNA ligase n=1 Tax=Cyclophora tenuis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig919contigA-nodosum_M_contig919:81327..88967 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog35128.Thaps268068
PFAMstRNA-synt_2
Model size2445
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00055,RC00523
KEGG koko:K22503
KEGG ReactionR05577
KEGG Pathwayko00970,map00970
KEGG ModuleM00359
Hectar predicted targeting categoryother localisation
Exons11
Evalue1.85e-193
EggNOG OGsCOG0017@1|root,KOG0556@2759|Eukaryota,2XBSM@2836|Bacillariophyta
Ec32 ortholog descriptionAspartyl-tRNA Synthetase
Ec32 orthologEc-06_003810.1
EC6.1.1.12
DescriptiontRNA synthetases class II (D, K and N)
Cds size1752
COG categoryJ
BRITEko00000,ko00001,ko01000,ko01007,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig919.7.1prot_A-nodosum_M_contig919.7.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig919 81915..88862 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870377.7189014-UTR-A-nodosum_M_contig919:81326..819141680870377.7189014-UTR-A-nodosum_M_contig919:81326..81914Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig919 81327..81914 -
1680870377.8630846-UTR-A-nodosum_M_contig919:88862..889671680870377.8630846-UTR-A-nodosum_M_contig919:88862..88967Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig919 88863..88967 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870377.732964-CDS-A-nodosum_M_contig919:81914..820211680870377.732964-CDS-A-nodosum_M_contig919:81914..82021Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 81915..82021 -
1680870377.7460217-CDS-A-nodosum_M_contig919:82424..825541680870377.7460217-CDS-A-nodosum_M_contig919:82424..82554Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 82425..82554 -
1680870377.758525-CDS-A-nodosum_M_contig919:82720..829051680870377.758525-CDS-A-nodosum_M_contig919:82720..82905Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 82721..82905 -
1680870377.7693744-CDS-A-nodosum_M_contig919:83311..834921680870377.7693744-CDS-A-nodosum_M_contig919:83311..83492Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 83312..83492 -
1680870377.7800055-CDS-A-nodosum_M_contig919:83922..840241680870377.7800055-CDS-A-nodosum_M_contig919:83922..84024Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 83923..84024 -
1680870377.7944868-CDS-A-nodosum_M_contig919:84261..844261680870377.7944868-CDS-A-nodosum_M_contig919:84261..84426Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 84262..84426 -
1680870377.805216-CDS-A-nodosum_M_contig919:84919..850481680870377.805216-CDS-A-nodosum_M_contig919:84919..85048Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 84920..85048 -
1680870377.8164475-CDS-A-nodosum_M_contig919:85330..854381680870377.8164475-CDS-A-nodosum_M_contig919:85330..85438Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 85331..85438 -
1680870377.8268728-CDS-A-nodosum_M_contig919:85832..860461680870377.8268728-CDS-A-nodosum_M_contig919:85832..86046Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 85833..86046 -
1680870377.839205-CDS-A-nodosum_M_contig919:87837..880221680870377.839205-CDS-A-nodosum_M_contig919:87837..88022Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 87838..88022 -
1680870377.8502996-CDS-A-nodosum_M_contig919:88616..888621680870377.8502996-CDS-A-nodosum_M_contig919:88616..88862Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig919 88617..88862 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig919.7.1

>prot_A-nodosum_M_contig919.7.1 ID=prot_A-nodosum_M_contig919.7.1|Name=mRNA_A-nodosum_M_contig919.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=584bp
MLKAKFQTTTGEAYVAPGQEKKKKPLAASPPALAGEGTEAADPNKKSKKQ
LQREKKEAEKAAAKAKAKEEREKKQAEDTAKGSPLTLRTGGSRSTPEGQE
WRYGDLPLIQSSEMTGKKFSNIGELTAEKAGQELRLRVRVHASRSIKRGV
FLVLRQSLYTVQATVFVGGNVGRPMVHYAEEISKESVVDVKGQLALTPTP
VSGCTQKDIELKVEEIHVVSSADTFLPLIVADAMRPDLTPEEEEKAEKEG
KAPTVAADTRLDHRWIDLRTPANQAIFKIQSAVCKYFRDNLASKGFVEIH
SPKLLAGASEGGAEVFMTDYFGQPACLAQSPQLFKQMAAACGGFERVMEI
GPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYYEVLEVFSDLFIYIFDELN
RNCKEEIEAVRQQHPFEDLRYARPTLRISFQEGIQLLRNAGHDADPEDDL
STENEKKLGDLVAKKFGTDFFMMDKYPLEARPFYSMPCPMNPKHSNSFDI
FIRGEEIVSGAQRVHDLPLLIERAKAKGIPLEGIASYLSAFKHGAEPHGG
GGIGLERVIMLFLGLKNIRKTSMFPRDPKRCAP*
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mRNA from alignment at A-nodosum_M_contig919:81327..88967-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig919.7.1 ID=mRNA_A-nodosum_M_contig919.7.1|Name=mRNA_A-nodosum_M_contig919.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7641bp|location=Sequence derived from alignment at A-nodosum_M_contig919:81327..88967- (Ascophyllum nodosum dioecious)
GAGGAGCTCGCGGCGCTCATCGAGGCCAAGGGCGAAGAGATACGCACTTT AAAAGCAGAGGGCACAACAAAGGATGTCCTTAAGCCACATGTTGACGAGC TGCTGATGCTGAAGGCCAAGTTCCAGACCACGACGGGCGAGGCATACGTT GCTCCAGGGCAGGAAAAGAAGAAGAAACCGTTGGCGGCATCCCCTCCAGC TCTCGCTGGTGAAGGCACCGAAGCAGCAGATCCCAACAAGAAGTCGAAAA AACAGCTGCAGCGCGAGAAAAAGGAGGCGGAGAAGGCCGCCGCGAAGGCG AAGGCTAAGGAAGAGCGGGAAAAGAAACAAGCTGAGGATACAGCTAAGGG CGTCGTTGCGGAGAGGTGTGTGTTCGGGGGGGCGCGAAAGATTTTTGGCG AGTGTGATGGTAATGTCGCCTTTGAAGGTTGAGATTTGCAGTTCCTGTAG CCACACACCATCGGCTTGTCACCTTTCTTTGCATTGCCCTCTCGGACCAC CAATGCTGCAAGTACTCTGTGGTACTGTCTGTACTGCTGATCCATGATGG GTCTCGTAGATAGTCCGCACGACAGCCAGCTCAAGAGCTACAAGTACTCT TTTGCAGGTTGCCTTTCATGGGGCAAATACTGCGCACCCCTCTTGAGTGA AAGCGCTTTTTTCGACGGTATTGCAGGCGTCCGCTCGCGATCACGAGTTG CTGTGGCCGTCAGCGTTTGGAGGAGCGTCTGGAGTCTGGCTGTATACAGT ACCTGGTATTACATAGGAGTATTGAACCATGTGACACAAGTCATTATTTT CCCGGAAATCGCCTTTGTTCTTACCTTTTCCCTGAGTTGGTGACCCTCTG CTGTCTATAGACGTACAGAGTGCAACATACAAAACAGCACTGCAGAGAAG ATGCGTCTGTTCTTGTTCCTTTTCCTGCTTGATGGCGCTGACAAGTCGCC TCTGACCTTACGCACGGGCGGCTCCCGCAGCACTCCGGAGGGGCAGGAGT GGCGATATGGAGACCTTCCCCTCATCCAGTCCAGCGAGATGACGGGGAAG AAGTTCAGCAATATCGGGGAGTTGACGGCGGAGAAGGCGGGACAGGAACT TCGGCTGCGTGTCCGGGTACATGCGTCCCGGTGAGTACCACGCTCGTGTA GTCCCCATATTCTTTCTGGCACTGATTGCGTCTCTGTAAAGCCAGAGTCG TGAAACATTTTGACGAGAATCGTGAAATCTTTTGACAAGAGTCGTGAAAC CTTTTGATAAGAGTCTTTAACGGGGGCCCCTTTTTCCTATAGGAATAGAA CACCTCATTTATATGAAATTTTTCTGTTACAGTTCGTCATATGGTTATTA AGGGCATATAAATATCGGCAGCTCCACCCCTGATTGGCCAGGAACGGTCC AGAGGACTCGGTTGGTCACAGTACATGCATGAGTATATTGGCGCGTCGCA GGGCTATCATGGGGTCTTTTGTGCAGCCCAAACGGTCCTGTCTAGGTCTG TCTAGGTGCTGCCACGTGTTGGTCACAGTACATGCAGGCGCGTCGCAGGG CTATGTGTTGGGGATTCCGCTGTACCCCACCGGCCGTAGCAGCACCTAGA CAGGGCCGTTTGGGTTAGGGTTAGGGTTAGGGTTCGCACACTCATGCATG TACTGTGACCAACCGAGTCTTCTGACGCGAGATCCAGGTGGTGGGGTAAA TGAGGAAATACCCCACCGGTGGGTAAAACAGCCAGCCCGTTAATAGGTTG ATCGGTTGATCGGTACGAGAAAGCCGTGAATATGGGCGTTTTTGCCTCAA AGTACAATTTTGGTATCAGCAATTCGAGGTTTGAGACCTCTTGGTGCCAT ATCGCCACATGTTCCAAACGTAAGAGTGGATAGTCACGTATCTTTATTCA GTAGGAATGTTTGGGCTTCGAAGGTCATGTATCGAAGTTCGGCGGTCAAC GCTTTGGTGGTTTTAGGAATCCCACCACAAATGCCACAGAAACGGTCTAT TAGACACATTTAGACAACTTTCTTCGGCTTAGTAGCACGTAGAAGGTTGT CCTCTTCGGAGGGTGCTCCAGAAGGGGTTGGGAAGGTCTGCTGAGCAAAA CCGCGGTCTCGGAGGCGACATCAGGCTCAAGAGCGGTCCATACCTGGTTC TGTTCGTACTGCTGCATGGCGGGAGACCTGGCTCGGGCCGACCAAGGACT TTTCTCGAAAATGTATTGCCACAAGAGAGATATCTACTAGTCTCAGACCT TTATCTGCAGAGTTTACCATGTGCTACGCAAATGCACACCTGGCGATATG GCAGCCTACCTGCACCGAGCTCTATCGGGGGGCATAGGTCACAGGAGGTA TTTGAAGGGTTATGACTGTGGTCCAAATAGCATAGTGAGAAACAACGAGG AACGGTCGTGGGCTCCGAGACGATTTTCTTGGTATCGTGCCACATGACCT ACAAGCCCCCCCAGGCCGATAGCCCTGAGTCATAGGATCACGTATGTACC TTGTAGAGCTGCCATGGCGCCGTGGTTGCTCCGTTATCCGATGTGCCCCA AGAGGGCTCTCCAGTTTTCTCTCTGTTTTCTTTAATAAGGCTCCATTTGG CCTCCCTCCCATTGGCTAGTAGCTACAGTCGTGTGGCTGTTTCATCAGTA TTTTGGGCACAAAATATATATATTTTCGGCCCAAACGCGTGGGGCCCCGT TAAACCTTTTGACAAGAGTCGTTTAACCTTTTGGCAAGAGTCGTTAAACC TTTTGGCAAGAGATCACCGCGTAGGGTGTGTGTGACCCGACATGACATGC ACCCGACGCCGCCACCGCTCTAGCGCCTTTCCCTTTCTTTCCTTTCTTTC CTTTCCCTCTCCCTCTAACGGTGCTTCTCCCTCGACATCTTGGTGACCTT TTTTGGTTCTGTCGCCAACAGTTCCATCAAGAGGGGCGTTTTCCTCGTCC TCCGGCAGTCTCTCTATACTGTCCAGGCGACGGTCTTCGTCGGGGGGAAC GTTGGCAGGCCCATGGTCCACTACGCCGAAGAAATCTCGAAGGAATCGGT AGTAGACGTGAAGGGTCAACTGGCACTGACCCCCACCCCGGTGTCTGGCT GCACGCAGAAGGATATCGAGCTCAAAGTTGAAGAAGTGAGCGTGGGCTTA AAAAGGGGACAGGGGCTGTAATGTACGAACATTGATTTTCACACTGTCTA TTTGATAGCACATTCATCGGGCCGTCAACTCCAGCAGCGCATTCCATTCG ACTTCGTCTTCCCCGTTGTTGTGTCTGATCAAGTCTGCGGGATTGGGCTA GTTTTTGTCATGTAGATCAGGCACGCACTGGGATTTCGCCGGTTTCGTTT CATTCTCTCACCCCGGCTGCGTGCCTTTCGTCGCTTGTCCAGAGCGTCAT ATCCCAAACCGCGGCCTTATCCCTCTGACTACACTACTATTTGATACGAG TTTCTGAGTCTTCCCTGCGCACTTTTTGTTGCGACCTTTTTCTTTTTTGG CGTGCCGTTTTTTTGTTTTGTTTTTTAAGATTCATGTGGTGAGCTCTGCC GACACATTCTTGCCCCTCATTGTGGCCGACGCGATGAGGCCGGATCTGAC GCCGGAGGAGGAGGAAAAAGCGGAAAAGGAAGGGAAGGTAAGACGAGAGA CGGAGAGGGCTGTCCCCGCTCTTCCATGGGACGACGTCTGGAGCCATTGC TATTTGACAACTTTTCATTGTGTTGGAATAAAAGTATTTCATGTTTAGGA TTAAAATAAAATAAAATCTATTTTAGTCGAGAGGAAGGTTTCTCCTCTAA GCGCACCGCTGTTGTTTTTTGCACAACACAATAATTGTGGTCACACAAGA CGTGCACTTGTGTCTCTGTCCTCCACCTTGCGTGCTGTGCGCGAATCTTG GTGGTCGTGCCGTTCTCAGGCACCCACGGTGGCGGCCGACACGCGGCTCG ACCACCGTTGGATAGACCTGCGAACACCGGCAAATCAGGCGATATTCAAG ATTCAGTCCGCGGTGTGCAAATACTTTAGGGACAACCTTGCCTCCAAGGT GTGCTGAGAGAAAAACGCAAATTACGTGGTCACGTAGACCTCTTCAAATC TCTTTGTCGTAATGCGTCGATTTGACCGCCAGTGTGGCGAGGCCAAAGCC GTCGTTTTCGACACATTTTGTATCAACGTGATACATGAACGTGATATGTT GAGCCGCGGCCTGATGACATGAACCTTGCAATACAAGCTCTGGGGAAAGG GCACACCTCGAACAGCGTCGCTTCCTGCCGTCCGAAGGAACCCCGTATAC TTGAACGATCGGAATGACTGCCGTTCTTGGAGCATCTACCAACGCGACAC GTCAGTTAGGAAGTACGTCCAAGGCTTGCCCAAGCTTGCTGATCTGTGGC CTCTCGGCTGTGCTGCGTTCAGTAGGGTAGTTAAGATGCGGCGTAGAATA CGCTTGCCACTGGACGCTTTTAATAGCGCAAACTTACAGCCCAAGTGAAC CGGATTCCAAAGCCCAAAGCAATTCCGTCGCCGTTTCTCAGGGGTTCGTG GAAATCCACAGTCCCAAGCTGCTGGCTGGTGCGTCGGAGGGGGGAGCAGA AGTATTCATGACGGATTACTTCGGGCAACCCGCGTGTCTCGCGCAGAGTC CTCAACTCTTCAAGCAGATGGCGGCGGCTTGCGGAGGTTTTGAACGTGTC ATGGAGGTGAGCACGTTCAAAAATTGCGGGACCAGCCCCGAGAGGCAGTC GACCCTTGATCGGCACTACAATGAGCTATGAGAGCGTAAGGCTCTTTATG CAAATGCAGACCTCACTCATTGTACTATGTGAGTCAGCGCACCCCAGTCG CTTGTTCTTTACACCTGCCTGCTCTCTTATGGTCCGATTTAATCAATCCC CGTTCTGTTTCTGATTGGATGATTCGATTTGTGTAATAATTAGATTGGAC CAGTGTTCAGGGCTGAGAAGTCCAGGACCCATCGCCATCTTTGCGAGTTC ACGGGTCTCGATTTCGAGATGGTGATCAAGGAGCACTATTACGAGGTAAC GGTATTATCTACCTGGTACGAAACAAGGAGGAGTTTTAGCGATATTATGT ACAAAACAAAGAGGATCGGAATGGGATTTTACTGTTTCTGTTACTAGGAG AGGTCTCTTGTTTGACCTTGTTGTGGGTTCTAAATAGTCGGCCAAATGAT GTTGGTTTTAAGGGGTGTCGCTTTGGATTGTAGGCACGAACCAGGCTTTG TTGAAGCCTTCGAGAGTTTCGGCGAAAATATATATTCGATTGGTGCGTAT GAAACGATTAGGCCCAACGGCTTGCCGGATGTACGGAGCGGCCCCACTTG AGCCCCGCAATCGTTGCCGCCAAAAGGAAAGCTTCGAGTTGGCGTGGGGA GTACAGTACCCTTGGAGACTGACAGCATGAGTCTTGCGATGCGCCTGCCT TGTGTGCACTTACTTCCCTGTCAAGGTACTGGAAGTATTCTCCGATCTCT TCATCTACATCTTCGACGAGCTGAACCGCAACTGTAAGGAGGAGATCGAG GCGGTGCGGCAGCAGCACCCCTTTGAAGACCTGCGTTATGCTCGTCCCAC CCTCCGCATTTCGTTCCAGGAGGGCATCCAGCTTTTGAGAAATGCTGGCC ACGACGGTACGAGCGTGCTTCCGCGCGTGGATTCTGATTGTTTCGACATT CGGGGGGAGGGCGGGGTTGCTTCGCTTGGGTGTGCGGATTCGACGACCAT CCGGCGAGGTGTCCCGGGAGATTCCACGAATCCCCTCCATGAAAGAAGTA CCATCCGATGGTCTCGTCGAAATGTTACAGTATGGATGGCATGCAGCGCG GTGTTATTATTAGTATATGGTCGCGCGGATAAGACTTCCTTACGGGCAAT CGTGCTTTATCACGTAACGCTGTATTTACTCCTTTGCTGAACTGAACGGA CGGTGCACTCCAACACTCCAACTGCTGCATTCGAAGCACGGGGGTCGCGA ATGGGGTAAGACTCGCGCTGTCCGGGTGTAATTTTATCGTCGCGTTTTTT TTTTGCCCGCAGCCGACCCAGAAGACGACCTATCAACGGAGAACGAAAAG AAACTGGGCGATTTGGTGGCGAAGAAGTTTGGCACGGATTTCTTCATGAT GGACAAGTATCCCCTCGAGGCAAGACCGTTCTACTCGATGCCCTGCCCGA TGAACCCGAAGCACAGCAACAGCTTCGACATTTTCATCCGAGGAGAGGTG AGGAAGCAAACTTGCGCGTTTTCTATGAAGCTGCATTCCGTCATTTCCAA TAAAATGTGTTCTATGTTGCTGCGCACCCCGTTACCCTTGGGTTCGTACT GCGTCTCGCCCCCCTTTTGTGATAATTTTGGAGCCCTCCCGTCTGTTTCA CTCCCCATGGCAGGAAATTGTTTCGGGCGCTCAACGAGTACACGACCTGC CCTTGTTGATCGAGAGGGCCAAGGCGAAGGGCATCCCCCTGGAGGGGATC GCGTCGTACCTTTCCGCCTTCAAGCACGGCGCAGAGCCGCACGGTGGGTC TAGGCCACAGCAGGCACAGCAGTTCAGCTCTCGTTCTTATAGTTTACAGT CCTATCAATATTGATATGAATACTAATAGCTTGTCTTGGCCATAGCGTCA CAGCAGTCATATGATGGGCGTCACAGCAGCGCTATCCTCCTTTCACCACT CAAGAAGGGTTCCTCAGCTACTTAGTCTATGTAGGTACCGTTATTAATAG ATGCTTATCGTTTTTACCCTGCCGTGCTGTCGAAGAAACGTCCATCCTGG CAATGAATGCTGCGCGAAAAACTATCAGCGTGCTACCCTGTAGGCGAGGA AACTGAAACAAACCGTTAGGCAGTACACGTTTTTTAGCTACGATGTCACC CCCCCCCCCCCCCCTCTCCTCTCCTCCACTCGCGCACTTTCCGCAGGCGG CGGGGGCATCGGGCTTGAGCGAGTCATCATGCTCTTCCTGGGTCTCAAGA ACATCCGGAAGACGTCCATGTTCCCCAGGGACCCAAAACGATGCGCTCCT TGAACTCCGTCGGGATTTTTTCCCTCCGGGCTTCCCGTTTTCTTCCTCGT TGCCCCGTCTTCGTGAATAAAGCGGACAACGTTTTGGTAGAGGATCGTGG TGGAGGATCGTGGTGCGAAGAATGGAATTTGGGGAGTTTGTTTGATTGTT TGATTGTTTGATTGTTTGATTGTTTGATTGTTTGATTGTTTGGTTGTTCT GTGTGAAGGTCCTGGAGTTGGAAGAGCGTGATGACCCTACCCTCTCCAAA CCAACTTGGAAATGTTAATGTTATGAAATATTATGAATTAGTTGTTGGAA GATAGAGCCCTAACGTCTGGTCCGTAGTTCTTAAGAGCATCGCAGGGATA AACACCCAATAATTGGAGAGCAGGGGCCACACGCAGCTGTCAAACGCACG AGAAAGCTGGACGCGCGTCTGATTTGACGCGATCATTTGTCGTGACTGCT TCTCCCTTTCTGCTCCGCAAATACCTATGACTATGACTATGACTACCTTG GTCATAGTCAGTGCGACCACCGCCGTGTGACGTTCCCGTCCCTAAAAAGG TATTTTACTAAAAGGGTATTACTCATGCATACGAAGGGTAC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig919:81327..88967-

>mRNA_A-nodosum_M_contig919.7.1 ID=mRNA_A-nodosum_M_contig919.7.1|Name=mRNA_A-nodosum_M_contig919.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1752bp|location=Sequence derived from alignment at A-nodosum_M_contig919:81327..88967- (Ascophyllum nodosum dioecious)
ATGCTGAAGGCCAAGTTCCAGACCACGACGGGCGAGGCATACGTTGCTCC
AGGGCAGGAAAAGAAGAAGAAACCGTTGGCGGCATCCCCTCCAGCTCTCG
CTGGTGAAGGCACCGAAGCAGCAGATCCCAACAAGAAGTCGAAAAAACAG
CTGCAGCGCGAGAAAAAGGAGGCGGAGAAGGCCGCCGCGAAGGCGAAGGC
TAAGGAAGAGCGGGAAAAGAAACAAGCTGAGGATACAGCTAAGGGCTCGC
CTCTGACCTTACGCACGGGCGGCTCCCGCAGCACTCCGGAGGGGCAGGAG
TGGCGATATGGAGACCTTCCCCTCATCCAGTCCAGCGAGATGACGGGGAA
GAAGTTCAGCAATATCGGGGAGTTGACGGCGGAGAAGGCGGGACAGGAAC
TTCGGCTGCGTGTCCGGGTACATGCGTCCCGTTCCATCAAGAGGGGCGTT
TTCCTCGTCCTCCGGCAGTCTCTCTATACTGTCCAGGCGACGGTCTTCGT
CGGGGGGAACGTTGGCAGGCCCATGGTCCACTACGCCGAAGAAATCTCGA
AGGAATCGGTAGTAGACGTGAAGGGTCAACTGGCACTGACCCCCACCCCG
GTGTCTGGCTGCACGCAGAAGGATATCGAGCTCAAAGTTGAAGAAATTCA
TGTGGTGAGCTCTGCCGACACATTCTTGCCCCTCATTGTGGCCGACGCGA
TGAGGCCGGATCTGACGCCGGAGGAGGAGGAAAAAGCGGAAAAGGAAGGG
AAGGCACCCACGGTGGCGGCCGACACGCGGCTCGACCACCGTTGGATAGA
CCTGCGAACACCGGCAAATCAGGCGATATTCAAGATTCAGTCCGCGGTGT
GCAAATACTTTAGGGACAACCTTGCCTCCAAGGGGTTCGTGGAAATCCAC
AGTCCCAAGCTGCTGGCTGGTGCGTCGGAGGGGGGAGCAGAAGTATTCAT
GACGGATTACTTCGGGCAACCCGCGTGTCTCGCGCAGAGTCCTCAACTCT
TCAAGCAGATGGCGGCGGCTTGCGGAGGTTTTGAACGTGTCATGGAGATT
GGACCAGTGTTCAGGGCTGAGAAGTCCAGGACCCATCGCCATCTTTGCGA
GTTCACGGGTCTCGATTTCGAGATGGTGATCAAGGAGCACTATTACGAGG
TACTGGAAGTATTCTCCGATCTCTTCATCTACATCTTCGACGAGCTGAAC
CGCAACTGTAAGGAGGAGATCGAGGCGGTGCGGCAGCAGCACCCCTTTGA
AGACCTGCGTTATGCTCGTCCCACCCTCCGCATTTCGTTCCAGGAGGGCA
TCCAGCTTTTGAGAAATGCTGGCCACGACGCCGACCCAGAAGACGACCTA
TCAACGGAGAACGAAAAGAAACTGGGCGATTTGGTGGCGAAGAAGTTTGG
CACGGATTTCTTCATGATGGACAAGTATCCCCTCGAGGCAAGACCGTTCT
ACTCGATGCCCTGCCCGATGAACCCGAAGCACAGCAACAGCTTCGACATT
TTCATCCGAGGAGAGGAAATTGTTTCGGGCGCTCAACGAGTACACGACCT
GCCCTTGTTGATCGAGAGGGCCAAGGCGAAGGGCATCCCCCTGGAGGGGA
TCGCGTCGTACCTTTCCGCCTTCAAGCACGGCGCAGAGCCGCACGGCGGC
GGGGGCATCGGGCTTGAGCGAGTCATCATGCTCTTCCTGGGTCTCAAGAA
CATCCGGAAGACGTCCATGTTCCCCAGGGACCCAAAACGATGCGCTCCTT
GA
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