mRNA_A-nodosum_M_contig910.14.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig910.14.1
Unique NamemRNA_A-nodosum_M_contig910.14.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: D8LC92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC92_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 1.410e-132
Identity = 204/289 (70.59%), Postives = 225/289 (77.85%), Query Frame = 1 
Query:  142 MLNCYTPRAASLERGDVNNGSSSRDGKGEEMDVDERNENVKVTNDKSAANDVPNADITCIKHVRRDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQRMMEAKLQASAT 1008
            M NCY P AA  +           D K +  D D +  N   T + S A+             R DGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQ+G D+AFSEEGQL CDFSYAPFA PGGRRE RGGK DDERELSTL+RQTLESS+QV RLTK+VV +HVMVLQADGGELAVAT+CASMALADAGIELYDLVTACSV   GTQM LDPT++EE + AGVM +ALM GS+QVTQWWQEGRF G +VA+ALELCTDGC CV +MMEAKL+AS T
Sbjct:    1 MNNCYKPLAAPAQN----------DAKSKRRDRDGKAPNGTATKEPSLASTT-----------REDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRRETRGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTT 268
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BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: A0A835ZHR0_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR0_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.370e-75
Identity = 128/223 (57.40%), Postives = 162/223 (72.65%), Query Frame = 1 
Query:  331 RRDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQRMMEAKLQA 999
            R DGR   ++R+VY+D+GVV+ A+GSAY+E +HTKVICAVYGPHAQS  D AFSEEGQL CD   APFA P  +R    G+TD+ERELS  ++Q LE+SV++  LTKT VD++V VL ADGG L  A +CAS+ALA+A IEL+DLV AC+ A    Q+ LDPT +EE  A G ++VA+M  S++VTQW Q GR    + A A+ELC DGCA V  MM A+L A
Sbjct:   33 RGDGRKASELRRVYLDLGVVSQASGSAYLELDHTKVICAVYGPHAQS-MDTAFSEEGQLKCDLRMAPFAQP--KRSEVRGQTDEERELSATLQQALEASVRLDLLTKTAVDVYVTVLAADGGVLGAAITCASLALANASIELFDLVAACTAACADGQVLLDPTAQEEAAAGGSVLVAVMPSSREVTQWRQRGRLPSAQAAAAVELCMDGCAGVATMMRARLLA 252
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BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: A0A7S2UZ52_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ52_9STRA)

HSP 1 Score: 221 bits (562), Expect = 9.500e-67
Identity = 122/257 (47.47%), Postives = 163/257 (63.42%), Query Frame = 1 
Query:  313 TCIKHVRRDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPG---------GRREHRGGK-TDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVAD-NGTQMFLDPTEKEETNA-------------------AGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQRMMEAKL 993
            T IK  R DGR   +MR+V++DVG+++ A+GSAY+E N TKVIC + GPHA S  D  FSE+GQL  D  YAPFA  G          RR+H   + TD ER+ S LIRQ LE+S+Q+  L K+++D+++ VLQADGGEL  A +CAS+AL+DAGIEL+DLV  CSV    G+++ LDPTE E +                     AGVM V     S++VTQWWQEG+F  + +A+ L LC DGC  + ++M+ KL
Sbjct:   19 TIIKPSRADGRDDKEMRKVFIDVGILSCASGSAYIELNMTKVICTISGPHAISRADDTFSEQGQLRVDLRYAPFARVGQSQYETNDRDRRDHHPARQTDGERDASALIRQALEASIQMHLLPKSLIDVYIWVLQADGGELGAAVTCASLALSDAGIELFDLVVGCSVGCLGGSRVLLDPTEVEISQQRAPEDSSSGGARGGKQGAKAGVMTVTFTPASQEVTQWWQEGQFDQESMARGLALCIDGCLVMHKIMKEKL 275
[Close]
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: A0A2D4C421_PYTIN (Exosome complex exonuclease MTR3-like protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C421_PYTIN)

HSP 1 Score: 193 bits (491), Expect = 2.030e-56
Identity = 106/233 (45.49%), Postives = 148/233 (63.52%), Query Frame = 1 
Query:  283 AANDVPNADITCIKHVRRDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQRMM 981
            A +D   A I     + R  R+  +MR  +M +GVV+ A GSAYVEF+ T+V+C+VYGP   +     FS+EGQLVCDF YAPFA   GRRE   G+ DDE ELS+++ Q L  +V + +L K VV I V+VL++DGGELA A +CAS+AL DA +E+YD+VTA S A   +++ LDP   EET   G +V+A M    ++T   Q GR    ++ +A++LCT  C  + + M
Sbjct:   21 ATSDAQRALIDKTLRLDRVRRSADEMRPTFMKLGVVSGAAGSAYVEFHRTRVVCSVYGPRNDTRSRREFSQEGQLVCDFKYAPFADASGRRER--GQDDDELELSSILTQALSPAVMLSKLPKCVVSIFVVVLESDGGELAAAINCASLALVDAAVEMYDVVTAASAAVVDSRVVLDPCAAEETRGDGKVVLAYMPTLGRLTHTLQSGRLQHAQLQEAVDLCTXACTGLMKNM 251
[Close]
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: K3XAM5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAM5_GLOUD)

HSP 1 Score: 193 bits (491), Expect = 2.090e-56
Identity = 101/214 (47.20%), Postives = 142/214 (66.36%), Query Frame = 1 
Query:  355 DMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQR-MMEAKL 993
            ++RQ +M +GVV+ A+GSAYVEFN T+V+C+VYGP   +     FS EGQLVCDF YAPFA P GRRE   G+  DE E+S+++ Q L  +V + +L K VV I+V+VL++DGGELA A +CAS+AL DA +E+YD+VTA       +++ LDP  KEE    G +++A M    +VT   Q G+     + +A++LCTD C  V + +M A L
Sbjct:   48 ELRQAFMKLGVVSGASGSAYVEFNRTRVVCSVYGPRNDTRSRREFSNEGQLVCDFKYAPFADPVGRRER--GQDPDELEMSSILTQALSPAVMLSKLPKCVVSIYVVVLESDGGELAAAINCASLALIDAAVEMYDIVTASGAGIVNSKVVLDPCHKEEVYGDGKLLLAFMPTMGKVTYMLQAGKIEHSELQEAVDLCTDACNGVMKTLMTASL 259
[Close]
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: A0A8K1CTD4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTD4_PYTOL)

HSP 1 Score: 193 bits (490), Expect = 2.320e-56
Identity = 98/207 (47.34%), Postives = 140/207 (67.63%), Query Frame = 1 
Query:  355 DMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQR 975
            +MR  +M +GVV+ A GSAYVEFN T+V+C+VYGP   +     FS+EGQLVCDF YAPFA   GRRE   G+ DDE E+S+++ Q L  +V + +L K VV I+V+VL++DG +LA A +CAS+AL DA +E+YD+VTA S     +Q+ LDP  +EE +  G +V+A M    Q+T   Q G+    ++ +A++LCTD C+ V +
Sbjct:   43 EMRPAFMRLGVVSGAAGSAYVEFNRTRVVCSVYGPRNDTRSRREFSQEGQLVCDFKYAPFADSTGRRER--GQDDDELEMSSILTQALSPAVMLAKLPKCVVSIYVVVLESDGSDLAAAINCASLALIDAAVEMYDIVTAASAGIVDSQIVLDPCHEEEVHGEGNVVMAYMPSVGQLTHMVQSGKIQHGQLQEAVDLCTDACSGVMK 247
[Close]
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: L8HCU8_ACACA (3' exoribonuclease family, domain 1 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCU8_ACACA)

HSP 1 Score: 179 bits (454), Expect = 8.300e-51
Identity = 97/233 (41.63%), Postives = 144/233 (61.80%), Query Frame = 1 
Query:  307 DITCIKHVRRDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQRMMEAKLQASA 1005
            D   ++  R DGR+P + R V++  GV++ A GSAY+E N TKVIC VYGP         +SE+G+L C F  A FA  G RR++   K  +E+ELS L+ Q LE S++++   K+ +D+ V+VL+  GG +  A + AS+ALADAGIE+YDLV +CSV    + + LDP+  EE  A   ++VA+M  + ++TQ  Q G     +  +A+ELC DGC+ + +MM   L  +A
Sbjct:   31 DAFVVEGKRLDGRSPDEFRPVFLKTGVISQAAGSAYIEMNQTKVICGVYGPRQTP--KTVYSEKGKLNCFFKLATFAENGERRKYVSDK--EEKELSMLMVQALEVSLRLETFPKSELDVFVLVLEESGGMVGAAITAASLALADAGIEMYDLVASCSVGVVDSHILLDPSIAEEKAAQSNLMVAIMPSANEITQMLQTGEIEHTKAPEAIELCLDGCSKIYQMMRQNLLETA 259
[Close]
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: H3GV34_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GV34_PHYRM)

HSP 1 Score: 177 bits (448), Expect = 3.450e-50
Identity = 92/209 (44.02%), Postives = 130/209 (62.20%), Query Frame = 1 
Query:  355 DMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQRMM 981
            +MR+ +M +G V+ A GSAYVE   T+V+CAVYGP   +     FS++GQLVCD  YAPFA    RRE   G+  DE ELS ++ + L  +V + +L K V+ + V VL+ DGG  A A +CAS+ALADA +E+YD+VTA S     + + LDP+ +EE    G M +A M    +VT   Q G+ H  ++ +A++LCTD C  V R +
Sbjct:   36 EMRRSFMQLGAVSGAAGSAYVELGRTRVVCAVYGPRTDTRARREFSKDGQLVCDVKYAPFADKWTRRER--GQDPDEMELSAIVEEALAPAVMLHKLPKCVLSLFVTVLEDDGGVFAAAINCASLALADAAVEMYDVVTAASAGIVNSTVVLDPSREEEQRGDGKMALAYMPSMGRVTYMLQAGKVHHTQLQEAVDLCTDACTGVTRTL 242
[Close]
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: D0NP71_PHYIT (Exosome complex exonuclease MTR3-like protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NP71_PHYIT)

HSP 1 Score: 175 bits (444), Expect = 1.360e-49
Identity = 92/228 (40.35%), Postives = 137/228 (60.09%), Query Frame = 1 
Query:  298 PNADITCIKHVRRDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQRMM 981
            P  D   ++ + +   +  +MR+ +M +G V+ A GSAYVE   T+V+CAVYGP   +     FS++GQLVCD  YAPFA    RRE   G+  DE ELS ++ + L  +V + +L K ++ + V +L+ DGG LA A +CAS+ALADA +E+YD+VTA S       + LDP+ +EE    G + +A M    +VT   Q G+ H  ++ +A++LCTD C  V R +
Sbjct:   17 PKDDDAPMERLDKSRTSSDEMRRPFMQLGAVSGAAGSAYVELGRTRVLCAVYGPRTDTRARREFSKDGQLVCDVKYAPFADKLTRRER--GQDPDEMELSAIVEEALAPAVMLHKLPKCIISVFVTILEDDGGVLAAALNCASLALADAAVEMYDVVTASSAGIVNGSVVLDPSREEEQRGDGKLALAYMPSMGRVTYMLQAGKIHHTQLQEAVDLCTDACTGVIRSL 242
[Close]
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Match: A0A3F2RG10_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG10_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.360e-49
Identity = 95/229 (41.48%), Postives = 135/229 (58.95%), Query Frame = 1 
Query:  295 VPNADITCIKHVRRDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELSTLIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGIELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQEGRFHGDRVAQALELCTDGCACVQRMM 981
            VP  D   +  +     +  +MR+ +M +  V+ A GSAYVE   T+V+CAVYGP A +     FS +GQLVCD  +APFA    RRE   G+  DE ELS ++ + L  +V + +L K VV + V VL+ DGG  A A +CAS+ALADA +E+YD+VTA S     + + LDP+ +EE    G + +A M    QVT   Q G+ H  ++ +A++LCTD C  V R +
Sbjct:   16 VPADDDAVMNRLDASRSSSDEMRRPFMQIRAVSGAAGSAYVELGRTRVVCAVYGPRADTRPRREFSNDGQLVCDVKFAPFADALTRRER--GQDPDEMELSAIVEEALAPAVMLHKLPKCVVSVFVTVLENDGGVFAAAINCASLALADAAVEMYDVVTAASAGIVNSTVVLDPSREEEQRGDGKLALAYMPSMGQVTYMLQAGQIHHTQLQEAVDLCTDACTGVTRSL 242
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig910.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC92_ECTSI1.410e-13270.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHR0_9STRA2.370e-7557.40Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A7S2UZ52_9STRA9.500e-6747.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2D4C421_PYTIN2.030e-5645.49Exosome complex exonuclease MTR3-like protein n=2 ... [more]
K3XAM5_GLOUD2.090e-5647.20Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CTD4_PYTOL2.320e-5647.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
L8HCU8_ACACA8.300e-5141.633' exoribonuclease family, domain 1 domain contain... [more]
H3GV34_PHYRM3.450e-5044.02Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
D0NP71_PHYIT1.360e-4940.35Exosome complex exonuclease MTR3-like protein n=16... [more]
A0A3F2RG10_9STRA1.360e-4941.48Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig910contigA-nodosum_M_contig910:97220..104199 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LC92
PFAMsRNase_PH,RNase_PH_C
Model size1028
Max annot lvl2759|Eukaryota
KEGG koko:K12587
KEGG Pathwayko03018,map03018
KEGG ModuleM00391
Hectar predicted targeting categoryother localisation
Exons6
Evalue2.31e-133
EggNOG OGsCOG0689@1|root,KOG1068@2759|Eukaryota
Ec32 ortholog descriptionMtr3 is a component of the exosome 3'->5' exoribonuclease complex, a complex that degrades mRNAs.
Ec32 orthologEc-14_005640.1
Descriptionpolyadenylation-dependent snoRNA 3'-end processing
Cds size1026
COG categoryJ
BRITEko00000,ko00001,ko00002,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig910.14.1prot_A-nodosum_M_contig910.14.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig910 97220..104199 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870363.7997043-CDS-A-nodosum_M_contig910:97219..973381680870363.7997043-CDS-A-nodosum_M_contig910:97219..97338Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 97220..97338 +
1680870363.8128178-CDS-A-nodosum_M_contig910:97976..982231680870363.8128178-CDS-A-nodosum_M_contig910:97976..98223Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 97977..98223 +
1680870363.8264651-CDS-A-nodosum_M_contig910:101378..1014471680870363.8264651-CDS-A-nodosum_M_contig910:101378..101447Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 101379..101447 +
1680870363.8447454-CDS-A-nodosum_M_contig910:102848..1030461680870363.8447454-CDS-A-nodosum_M_contig910:102848..103046Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 102849..103046 +
1680870363.8588169-CDS-A-nodosum_M_contig910:103228..1033961680870363.8588169-CDS-A-nodosum_M_contig910:103228..103396Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 103229..103396 +
1680870363.95225-CDS-A-nodosum_M_contig910:103974..1041991680870363.95225-CDS-A-nodosum_M_contig910:103974..104199Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 103975..104199 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig910.14.1

>prot_A-nodosum_M_contig910.14.1 ID=prot_A-nodosum_M_contig910.14.1|Name=mRNA_A-nodosum_M_contig910.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=342bp
LELRVQKHKPAARQAHANPFKPPLQPLVFFRLHPELLRFSLDFKYSSMLN
CYTPRAASLERGDVNNGSSSRDGKGEEMDVDERNENVKVTNDKSAANDVP
NADITCIKHVRRDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAV
YGPHAQSGRDAAFSEEGQLVCDFSYAPFATPGGRREHRGGKTDDERELST
LIRQTLESSVQVQRLTKTVVDIHVMVLQADGGELAVATSCASMALADAGI
ELYDLVTACSVADNGTQMFLDPTEKEETNAAGVMVVALMGGSKQVTQWWQ
EGRFHGDRVAQALELCTDGCACVQRMMEAKLQASATIDRGY*
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mRNA from alignment at A-nodosum_M_contig910:97220..104199+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig910.14.1 ID=mRNA_A-nodosum_M_contig910.14.1|Name=mRNA_A-nodosum_M_contig910.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6980bp|location=Sequence derived from alignment at A-nodosum_M_contig910:97220..104199+ (Ascophyllum nodosum dioecious)
TTGGAACTACGTGTGCAGAAGCACAAGCCAGCCGCACGCCAAGCCCACGC
CAACCCTTTCAAGCCCCCCCTTCAACCGTTGGTGTTCTTCCGCCTCCATC
CAGAATTACTTCGATTCAGGTGCGTGGTTGTTTAAAAGGAGCCCTCCTGT
GCCAAGGAGGAGATGCGTCTTACTTTTCACGGTAGTAGTGTCCTTCTGCT
GTGTCGCACGTACCCACCCCCCCCAACTGTTAAGAAAAATCTGAACGCAG
CTAAACCTTAACCTTCTGAGCAATCAAAAAGTTTAGGTGGGAAGATTGAC
TGTAAGAACATGTCCAATCGGTGCCATAATTTATAATTTACGATACATAT
ACAGACAGTATTCTTGTTCACACGATCATCCCGCATGGTTTTGAAAAAAA
ACTGTTTTTGTTTTTAAAGAAAAAAGGTGTCTCTGCATGGCGATTAATGT
AAGGGTACAGCATAACGGTGAGTTTCTCGCCGATATTATACTGTTGACCC
AATGTTGCTACCATCGGGGAACCCGCTTAAATGCCATGAAGAGGTTTTGT
ATTTGCGGCCTATGATTCCGCGTAAACGTTTTGACATTTTTCCCCCTGAC
TGGGGGATGCTCAGAAGGTCTAGTGCGTTCAGATTTTTCTTTAAAAACTG
ATTTCTAGTGGAACGTGTTTCCTATTAATAGTTGGTTCACCTCTGACGCT
TTCCTCGCCGGATGCATGGTTTCGTGCTTCGTGTTTCGTGCTCATCAACC
CTCTCAGTCTCGATTTTAAATACTCCAGTATGCTCAACTGCTACACTCCG
AGAGCGGCATCTCTAGAACGCGGTGATGTCAACAACGGCAGTTCTTCGCG
CGACGGAAAAGGAGAAGAAATGGACGTCGATGAGAGAAATGAGAATGTCA
AGGTCACCAATGACAAATCCGCTGCGAACGACGTGCCGAATGCGGATATT
ACTTGCATCAAACATGTACGAAGAGATGGGCGTGCTCCGTACGATATGAG
ACAGGTGCGAATGTGTTGTTGCGTGTGCGTGTGTGTTTTTATTGAATCGC
ACACACTATTGCAGTAGTTGTCATTCTACGCTACAGGTGCTCGCATTCGT
GTGTGTGTGTGTGTGTGTGTGTGTGTATTTATTAAATTGCACATAACCGC
GCAATCCGGCCCTGTAATCTACTCATTCTATGCTACTGCATGTAACCCAC
CTGGGGGTTACCTATCGTAAACATATTCTTGGCTAGAAATGCGCGTGCAC
ACAGCTACAACTCCTCTCCCCGCTACGACCGCTCTCGGCCGGAACCGTAA
AGCTGGTTTCTCGCCGCTTGGCGCAACAAATAGAGATGGGAATCCGACAA
ACAGGGAGCACCATGGCCAACTCTCCTTGTAACCttCCCCTCCAAACCCA
AAAATCTCGCCCCCCCCATCAAACCGTGCGACGTACTGCAGCAGTGGTGT
CGTCATTCCGCCCTCTTCCCCCTTCAACACCCAATCGGTGCGTGTCCCGA
CTGCACCCGCACATCTTTTCTTTCTACGTAAGAAAATCCCCGCCAGCCAT
AGGGCCCGGGTTGGAACATCAACCGTAAGTCTTGCACAGGGCGCTAATCG
TGAGGTTAAGGAGAGAGTCAAGGGTAAAGCTAGTCGGGTACAAAGTACCC
GAATAGGGTCTGCGCTCGTGTGTGTACGTCGGAACGTCCAACATCGTGAG
CTAAAACTCTCCAAGTCCCCACGATTTGCGCTCGTTACTGTCGTCATGGT
TGCTGTACCGACCGGTTGCGTAGTAAGTCCTCCTCCACTATTTTCCCAAG
ACATGCAGTCACACGAAAAATCCCCCACAAGCCATAGGGCACAAGGTGTA
CCACCAACCGTAAGTCTGGCGCTGGGCGCGAATCGTAAGGGCAAGGGATG
TGTGTGTGTACATATTTCTTAAATTGAACATAACCGCGCAATCCGGCCCT
GTCATCCTAGGATCCTCCTAAGGGGGGGGTCAATGTGTGTGTTTGTGCAA
ATTTCTTAAACTGCGTATAACCGCGCAATCCGGCCCTGTCATCCTAGTCT
TTCTATACCACTCGCCTTGATCCTCCCAAGGGGGTCAATGTATGTGTGTG
TGTGTGTGTGTGTGTGTGTGTATTTATTAAATTGCACATAACCACGCAAT
CCGGCCCTGTCATCCTAGTCATTCTATGCCACTCGCATTGATCCTCCCGA
GGGGGGATCAATGATACTTATTACGAAAACCTCTGATCAGGTGTGTGTGT
GTACATATTTCTTAAGTTGAACATAACCGCGCAATCCGGCCCTGTCATCC
TAGTCATTCTATCTATGCCACTCGCAGTGATCCTCCCAAGAGGTGTCAAT
GATATTTGTTTCGAAAACCTCTCATCAGTGTGTGTGTGTGTGTGTGTGAT
TAAATTGTACATAACCGCGCAATCCGGCCCTGTCATCCTAGTCATTTGTG
CTACAGTACTCGTATTGATCCTCCCATCGGCGACACCAATACTTCGTACC
TGGTATTTGTTACGAAAATATCTCACCAGACGGGATAAAAGAGACATGAT
ATAACATAATATAGCATAACATAATATGTGTGTGTGTGTGTGTGTGTGTA
TTTATTAAATTGCACATAACCACGCAATCCGGCCCTGTCATCCTAGTCAT
TCTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCAATGATACTTATT
ACGAAAACCTCTGATCAGACGCGTGTGTGTGTGTATTTATTAAATTGCAC
ATAACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCACTCGCA
TTGATCCTCCCGAGGGGGGATCAATGATACTTATTACGAAAACCTCTGAT
CAGACGCGACAAAGGGGACACGCTCTCTCTACTTGTACAATTCTTACTTA
AGCTCAGAGTTCCTTGTGCTCCCCTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTATTTATTAAATTGCACATAACCACGCAATCCGGCCCTGTCATCCT
AGTCATTCTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCAATGATA
CTTATTACGAAAACCTCTGATCAGACGCGACAAAGGGGACACGCTCTCTC
TACTTGTGTGTGTGTGAATGTTGTATGTCCTGCGCCTCTCGTGGCACATG
GCACATAGCACTAAACGCGTGTCATTTCATAATCCTACGATCCCTGGGTA
CGAGAACATAGAAATCGGCACACGTTTTGTTGTATTAAATTATGCTGCGG
AGCACAGCGTCGTTAAACTCCGCGTGGTCATCTTGATCTGTGATCGCGAC
CCGTGATCGCGACCCTGCACGCCCTATAGAAAGCCCTCAAGTGCGCGCTT
CCACCCCCTTTGGTGCCGTCGGTTATCAAATCACACTTAAATATTAATGT
CAACATTAATAGAATTTGCTTCCGACAGAGTCAGGATGAACCGCTTGTCC
TGCGTACAGTATGACAGATTCCGCCGGTGCTTTCAACATGCTTATAACTA
TTAATCTAACCACTCCATGCCAATAGTGGGTGTGGGAAAGAGAGGCGCAT
ATTGATTGGTCCATGGTGACCTGCCAAGGCAGGACCCGTTTGAACCTACC
TTGAGGTTTACTGACCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCACC
GGTACGCAATTGCGTGACCCGACAAACTCGGGACTGACCCAATGGCGTAT
GGCGGTTTAAAACAAATAAATGGACGCCGCCGCGGAAATCGGGAGGAATC
CCGTAAGTAAGCACCAGATTCGGCCTGAGTATGGAGATGAGCAGACTGAC
GCGGGACGGGACTGCCAGCCCGTCTAGCGAGACCAAATTCTCAGGCGCGA
ACGAAGACAGGGAATAATTTATTTTTCCTGTTCAGCTGACCACGAGCAGA
ATTGGTAACCTTACCTGGTTGCTCCATACTCTTGGTATATGCGATGACCA
TACTTACATACATAGAGACGTATGTTGCCTTTTCCGCCAACGAAAGCAAT
ACTCATGCTCGTACTCGGTTGGAATGTATCCCGTTACCTCCGTACGCTCT
CCTCAATCGGTGCATTCGAATCGGTCCATTACATACACATCACTATGACT
AAGTTCCCTCCCGACCGCATTGTCCGTCATTGTCCGTCATTGTCGTCATT
GTCTGTTAGGTGTACATGGATGTTGGGGTAGTTGCCCACGCCACAGGGTC
AGCGTATGTGGAATTCAATCATACGAAGGTGCGATACATGTATTGGTTGG
AATACAATACAATACAAAATTGATTCATCAACAAAGGTCGATGGCTTGAC
GGCATTTTTTTGCAACCCGCAATAGTGACTGTCTTCACCATGTTGAGGTT
CCAAATTATAGCATAACAGGTTAGGATTACTACTTGTGCTGTAGAATCCG
CGGTGACTCTGTGACTGACTTCGTAGCCACAGTAGCCACAGTACTGACCT
TAGCCACAGTCTTGACCTTAGCCACAGTACTGACCTTAGCTACAGTACTG
ACCTTAGTACTGGCAATTGTGACCTTAGCCACAGTAGAGAAGTTAGGAAA
GGTATTAATATTAATAGTTGCTAAAATAATAGTGGCAGTAGCCACTGTTT
TGTTTGGAGTGACAGTAGTATGACGGGCTAGTTTCATAAAAGCGGAGTGA
GGGAGGATCGATTAAAATCCCCGACAACACTCCAAGATGGCCAACCCTGT
TTTTCAGCTCTGTCTTCTCTTCTTCCGAGCCCCGATTACGCTTTGTCATG
AGTCGTGAGGATCAAATACACAAATACACCGAGGTATTTGTCGAATGTTT
TTTACCTCGTAGTCTAGCAACCTTACATTGGCATCGATGTTAGGAACGGA
TTCGAAAGCCTCTGCGCTATGAATAGCTTATTTTCCTTACCGTACCGTAC
ATCGGTATCAGATAAAAATAGTCCTGACCATAGGACGCTGGCTATGAGTT
GACACAGGATTCGAAAACTACTATAATAGTGTGACTTGATATCGAACATC
GAACATCGAACATCGAACATCGAACCTAGCCAACCCGCTTGAGTGGAGAA
TGTTACGATCATCAACAACCCTGTGTGATCGCCAATTCACTTTTTCTTGA
GGTCTAATGTGTAATCTCGCAGCTTGTCGTAACTTATTCTTATATCTCTT
CCATCTCGATGTATTAATGTATTACTGTATTAATGTATTAGACTAATGAT
ATTAATATTAATACTAATTTATTCTCTCATCCGAAGGGACAGAAAAGCTG
CGAGATGGGATCGACTCTAGGGTTCGATTCCCGATTTAGCTTTTTTATTC
AAGTAGCACGCCACCACTCCGGCTTCATTTGATATATACTGTATACTGTA
CGTTGATATATACAGCCTGAGAATGGAGATGAGCAGGCTGACGCGGGACG
GGACTGCTGAACCCGTCTCGCGAGACCAAATTCTCAGGCACGCACGGAGA
CAGGGGAATATTTTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAAC
CTTACCCGGTTGATCCATACTCTGCTATATGTGATGACCATACATACATA
CTGTATAATGTACGTTGATATATACTGTATACTGTACGTTGATATATACT
GTATACTGTACGTTGCCCCTTGACAACAGGTAATATGCGCCGTGTACGGA
CCTCACGCTCAGTCAGGGCGGGACGCTGCGTTCAGTGAAGAGGGTCAACT
GGTGTGTGATTTTTCTTACGCACCGTTCGCGACTCCCGGAGGACGAAGGG
AACATCGAGGAGGAAAGACGGATGACGAGCGAGAGCTCTCCACTCTAATA
CGCCAGACGCTCGAGTCTTCGGTGCAGGTGGGCATCGTTTTCTTCTTGGA
GGTGGTGGGTGGCTTTGGTCTCATTGATGGACCTCATAGGGCTGGGTTAC
TCGGCAGGCTTTGTGCCAATCGTTTGTTTTTTTCGCTTTTTTAATACCAG
TATAATAATACACCGTATTCATTCGTCCGTCGTGATCCCCTCTGCAAATG
TCGTTCCAGGTTCAACGGCTTACGAAGACCGTCGTCGATATTCACGTGAT
GGTCCTTCAGGCTGATGGAGGGGAGCTTGCGGTGGCGACTTCCTGTGCGT
CCATGGCATTGGCTGACGCAGGAATAGAGCTATATGATCTTGTGACGGCC
TGCTCCGTCGCTGACAACGGAACACAGGTAATGATGAAGCGATCGTCCAA
GATTCACGCCTCATTTATTTATGTTCTCGGCCTCTTAAAAAGTGCCTGGT
AGGAGGTATTCCTTGTGTATTCCAAGTATATCGTCTCTCAGGTCATTTCA
GGCGTTGTCCGCGTATGTCGTCTTTCAAGATTCGGCCGCTACTCTGGTTT
CTGTGGTTTCCGTAGCGGGAAGTGGAAGCATCTTAAGTAGTGTAATAGAT
TCTTATATTTTAAATCTATTAGTTGAGGGCTGAACCCTAATCTCAACAAA
AAATTGAAGGCGCAAACGGGGGGAGATTGAAGTTCACTCATCTCGACTCA
TCGATCGATCTCTTGGTGAATAGAGACGGATGAGCAGTGTTTGCAGAGAT
TAAATGTCTCATCTCACCTTACCAGCTAAGGGGTGGGGAATGGGGGATGG
CCCGCGTCCGATCGCAACCCCGGACGCGGCTAATAACATGTCACAGGAAC
GATCCCAACCACGAGAGGCAAGTCACAATCTAATCTAACCTTCACTCCCG
CCTGGTGATGACCTTTCCCCTTCCTTTGTGCTCTATGACTTATGTATGAC
CTCAGATGTTCCTAGACCCAACCGAGAAAGAAGAGACAAATGCGGCGGGG
GTGATGGTCGTCGCGCTCATGGGGGGGTCAAAACAGGTGACCCAGTGGTG
GCAAGAAGGACGATTCCACGGCGACAGAGTAGCCCAAGCCCTGGAGCTAT
GCACGGACGGCTGTGCCTGTGTCCAAAGAATGATGGAGGCCAAGCTCCAG
GCGTCTGCAACTATTGATAGAGGTTATTGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig910:97220..104199+

>mRNA_A-nodosum_M_contig910.14.1 ID=mRNA_A-nodosum_M_contig910.14.1|Name=mRNA_A-nodosum_M_contig910.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at A-nodosum_M_contig910:97220..104199+ (Ascophyllum nodosum dioecious)
TTGGAACTACGTGTGCAGAAGCACAAGCCAGCCGCACGCCAAGCCCACGC
CAACCCTTTCAAGCCCCCCCTTCAACCGTTGGTGTTCTTCCGCCTCCATC
CAGAATTACTTCGATTCAGTCTCGATTTTAAATACTCCAGTATGCTCAAC
TGCTACACTCCGAGAGCGGCATCTCTAGAACGCGGTGATGTCAACAACGG
CAGTTCTTCGCGCGACGGAAAAGGAGAAGAAATGGACGTCGATGAGAGAA
ATGAGAATGTCAAGGTCACCAATGACAAATCCGCTGCGAACGACGTGCCG
AATGCGGATATTACTTGCATCAAACATGTACGAAGAGATGGGCGTGCTCC
GTACGATATGAGACAGGTGTACATGGATGTTGGGGTAGTTGCCCACGCCA
CAGGGTCAGCGTATGTGGAATTCAATCATACGAAGGTAATATGCGCCGTG
TACGGACCTCACGCTCAGTCAGGGCGGGACGCTGCGTTCAGTGAAGAGGG
TCAACTGGTGTGTGATTTTTCTTACGCACCGTTCGCGACTCCCGGAGGAC
GAAGGGAACATCGAGGAGGAAAGACGGATGACGAGCGAGAGCTCTCCACT
CTAATACGCCAGACGCTCGAGTCTTCGGTGCAGGTTCAACGGCTTACGAA
GACCGTCGTCGATATTCACGTGATGGTCCTTCAGGCTGATGGAGGGGAGC
TTGCGGTGGCGACTTCCTGTGCGTCCATGGCATTGGCTGACGCAGGAATA
GAGCTATATGATCTTGTGACGGCCTGCTCCGTCGCTGACAACGGAACACA
GATGTTCCTAGACCCAACCGAGAAAGAAGAGACAAATGCGGCGGGGGTGA
TGGTCGTCGCGCTCATGGGGGGGTCAAAACAGGTGACCCAGTGGTGGCAA
GAAGGACGATTCCACGGCGACAGAGTAGCCCAAGCCCTGGAGCTATGCAC
GGACGGCTGTGCCTGTGTCCAAAGAATGATGGAGGCCAAGCTCCAGGCGT
CTGCAACTATTGATAGAGGTTATTGA
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