prot_A-nodosum_M_contig909.23.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig909.23.1
Unique Nameprot_A-nodosum_M_contig909.23.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length93
Homology
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BLAST of mRNA_A-nodosum_M_contig909.23.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.750e-33
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0 
Query:    8 QAAQVDAGDDEVNTCLVEDAGLPQGSFRAQLNDFNEGKLLRISADALVADAPDSADTTGFLVRDEDFWLEAKGFRNPFRLVVLPGS 93
            +A Q D GD E NTCL ED GLPQG+FRAQ +DFNEGKLLRIS+DALVA+A   A TTGFLVRD DFWLEAKGFRNPFRL V P S
Sbjct:  216 KADQRDPGDQEENTCLREDRGLPQGNFRAQFDDFNEGKLLRISSDALVAEATADASTTGFLVRDTDFWLEAKGFRNPFRLAVSPVS 301
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig909.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LB76_9PHAE1.750e-3375.58PKD domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig909contigA-nodosum_M_contig909:240124..240904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig909.23.1mRNA_A-nodosum_M_contig909.23.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig909 240124..240904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig909.23.1 ID=prot_A-nodosum_M_contig909.23.1|Name=mRNA_A-nodosum_M_contig909.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=93bp
MCRVLSLQAAQVDAGDDEVNTCLVEDAGLPQGSFRAQLNDFNEGKLLRIS
ADALVADAPDSADTTGFLVRDEDFWLEAKGFRNPFRLVVLPGS
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