prot_A-nodosum_M_contig909.12.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig909.12.2
Unique Nameprot_A-nodosum_M_contig909.12.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length248
Homology
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Match: D7FPE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE0_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.480e-90
Identity = 142/183 (77.60%), Postives = 157/183 (85.79%), Query Frame = 0
Query:   76 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKKGPHETSLGFLIGVTVVLNMITIMTAIYWGQLANCDTDEDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIYFLIRRRGVLTREDFG-SGGSYDDYGDNSY---ER----WVKPPVDD---HISATEGPNAGATPETTDL 247
            VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLK+GPH+TSLGFLIGVT+VLN+IT+MTAIYWGQLA CD+D DGDYDQYSCSN+SAMRGVAAFASIIWVLQLPFIY L++RRGVLTRED+  SGG Y DY D ++   ER    W KPPVDD    + A  G ++G TPETTDL
Sbjct:   39 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKRGPHDTSLGFLIGVTLVLNVITLMTAIYWGQLAGCDSDYDGDYDQYSCSNKSAMRGVAAFASIIWVLQLPFIYLLVQRRGVLTREDYATSGGRYADYDDPAFAPGERDSGGWGKPPVDDGSPRVGAVVGSSSG-TPETTDL 220          
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Match: A0A835Z3N9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.680e-31
Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 0
Query:   76 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKKGPHETSLGFLIGVTVVLNMITIMTAIYWGQLANCDT-DEDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIYFLIRRRGVL 199
            + T  F ICA VVA    AG   VLT L L  WE G++ L+++GP   S GFL+G ++V+  +T  TA+YWGQLA CDT   D    +YSC++R AMRG  AFA +IW++QLPF+   + +R VL
Sbjct:   25 LLTVPFAICACVVAGTAAAGAGAVLTALALLAWEAGSIALMQRGPAALSQGFLVGASLVMTALTFETAVYWGQLAQCDTYSGDVALARYSCAHRGAMRGACAFAVLIWLVQLPFVALAVAQRHVL 149          
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Match: A0A7S2V692_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V692_9STRA)

HSP 1 Score: 114 bits (285), Expect = 7.380e-28
Identity = 58/110 (52.73%), Postives = 78/110 (70.91%), Query Frame = 0
Query:   76 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKKGPHETSLGFLIGVTVVLNMITIMTAIYWGQLANCDTDEDGDYDQYSCSNRSAMRGVAAFASIIWVLQ 185
            V TA + IC+ VVAS  NAGF+ VLTGL+  V+ VGA  +L K     S+GFLIG + +L ++++ TAIYWGQLANC+T  +    QYSCSN+S  R V AFAS++++LQ
Sbjct:   22 VLTACYLICSFVVASTANAGFNAVLTGLVYAVYCVGAYQVLHKSKTALSVGFLIGFSALLIVLSLETAIYWGQLANCETVSES-ISQYSCSNKSGYRAVCAFASLLFILQ 130          
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Match: W7TS32_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS32_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.050e-23
Identity = 59/140 (42.14%), Postives = 87/140 (62.14%), Query Frame = 0
Query:   76 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKKGPHETSLGFLIGVTVVLNMITIMTAIYWGQLANCDTDEDGDYD--QYSCSNRSAMRGVAAFASIIWVLQLPFIYFLIRRRGVLTREDFGSGGS-YDD 212
            VF   + IC+ VVAS  N GF+ VLT LL   +  G   +L++     ++GF++GV+V++  +++MTAI+WGQLANC     G YD  +YSC+NRSA     AFA++++++QL F   L     VL R++F    S YDD
Sbjct:   22 VFVLCYTICSFVVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKMPLAVGFVLGVSVMITFLSLMTAIFWGQLANCSP---GYYDIKRYSCTNRSAYSATCAFATLLFLVQLVFTSAL-----VLWRDEFIQDSSAYDD 153          
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Match: D8LG48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG48_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.260e-16
Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 0
Query:   76 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLL------KKGPHETSL-------GFLIGVTVVLNMITIMTAIYWGQLANCDTDEDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIYFLIRRRGVLTRED-FGSGGSYDDY 213
            V T  FFICA VV+S  NAG +VVLT ++   + VG + ++        G  +T++       G LIG+T ++  +++MTA+YWGQ++ C+ D D D D YSC N   M  VA FAS + + +   +  LI     L +ED F   G YD++
Sbjct:   28 VLTICFFICACVVSSNANAGLNVVLTAMMYVAY-VGLLAVVFNRKRATDGGMDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTD-DVDGYSCYNSFGMAAVAWFASFLLISEAVTLAALI-----LWKEDMFFVDGGYDNF 172          
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Match: A0A7S2S6Q8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Q8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 8.810e-16
Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 0
Query:   76 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKKGPH-ETSLGFLIGVTVVLNMITIMTAIYWGQLANCDTDEDGDYDQYSCSNRSAMRGVAAFASIIWVLQ 185
            +FT  FFICA V A   N GF+VV T           + ++ +  H +  +GFL+G++     +++ TAI+WGQLA+CD        QYSCSN SA + V AFA+++++LQ
Sbjct:   32 LFTGCFFICACVAAKTANMGFNVVFTSFCFGFHVAVGILVIHRSLHTQLWVGFLLGLSGATAWLSLQTAIFWGQLADCDRHAH-HLSQYSCSNVSAYKAVCAFAALLFILQ 141          
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Match: A0A7R9U3K6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3K6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.410e-14
Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   76 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKKGPHETSLGFLIGVTVVLNMITIMTAIYWGQLANCDTDEDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIYFLIRRRGVLTREDFGSGGSYDD 212
            +F   FFICA VV+S  NAGF+   T LL  ++ V  +  +  G +      L+GV   + ++   TAI+WGQLA+C+  ++ +   YSCS RSA     AFA ++++ Q          +  L+  ++GSG  YDD
Sbjct:   46 LFAFCFFICACVVSSTANAGFNAFTTALLNIIFCVVMIRAINFGRNALLSNVLVGVGYTMMLMNFQTAIFWGQLADCEKVKE-EIPGYSCSTRSAYGATCAFAVLLFLAQGVSTSLFYLSKDDLS--EYGSGVEYDD 179          
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Match: A0A2D4BZK0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZK0_PYTIN)

HSP 1 Score: 57.0 bits (136), Expect = 1.680e-6
Identity = 35/130 (26.92%), Postives = 65/130 (50.00%), Query Frame = 0
Query:   72 VETKVFTAAFFICALVVASI-----DNAGFDVVLTGLLLCVWEVGAMWLLKKGPHETSLGFLIGVTVVLNMITIMTAIYWGQLANCDTDEDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIYFLIRRR 196
            + T +       C L VA++        GF+  LT  L  V+  GA+ +L K P   S+G LIG ++++ ++++  AIYWG +A  + + +           SA    + F S+I+V+QL   + +++ +
Sbjct:    9 LNTSLLAILVLSCGLXVATLFLLETPYVGFNAFLTASLHVVYAFGAIVILNKSPSAYSIGILIGASLLILVLSLEGAIYWGLVARDNLNRE-----------SASIAASGFHSLIFVIQLAVTWIVVKAK 127          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig909.12.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FPE0_ECTSI2.480e-9077.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z3N9_9STRA2.680e-3148.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2V692_9STRA7.380e-2852.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TS32_9STRA1.050e-2342.14Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
D8LG48_ECTSI2.260e-1637.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2S6Q8_9STRA8.810e-1639.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9U3K6_9STRA1.410e-1435.04Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A2D4BZK0_PYTIN1.680e-626.92Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig909contigA-nodosum_M_contig909:89495..91527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig909.12.2mRNA_A-nodosum_M_contig909.12.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig909 88581..93058 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig909.12.2 ID=prot_A-nodosum_M_contig909.12.2|Name=mRNA_A-nodosum_M_contig909.12.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=248bp
MRFRAQRHGTLILLYYRPAVACKDTLREKITHATPRRDNRRKILLEGLLI
SYSQLSKSNRFCQTPKNNDTHVETKVFTAAFFICALVVASIDNAGFDVVL
TGLLLCVWEVGAMWLLKKGPHETSLGFLIGVTVVLNMITIMTAIYWGQLA
NCDTDEDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIYFLIRRRGVLT
REDFGSGGSYDDYGDNSYERWVKPPVDDHISATEGPNAGATPETTDL*
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