mRNA_A-nodosum_M_contig909.5.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig909.5.2
Unique NamemRNA_A-nodosum_M_contig909.5.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: D7FPG4_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG4_ECTSI)

HSP 1 Score: 460 bits (1183), Expect = 3.160e-155
Identity = 252/463 (54.43%), Postives = 290/463 (62.63%), Query Frame = 1
Query:  247 REIRRLDASVAKYSDFADTMTSNHPVILYNFEGLLPSFKRWQKQGKADVDFLRGAFGNMVVPVVECSS-EGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGLYLKDWHFQRLRRDGGRD------------SGDGENVETPFFFADDWLNWWCDKQGQEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGG-LTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEG---------EWERQCELAMRTNSGLNVTDFASIVVARAIFLLS-----------DEKRSRGTGATVERTGWASITGESESDFRESRGDSGGGDRGVWHEERWKVFALEKIAAALRDLSTAPFVNHVFLDDAG 1533
            +++RRLDAS A+YSDF   M +N P                 K G+ADVDFLR  FG+M VPVVECS  EGYGE+R++SMTL EYLDAVH    DG+        S ++ GG  LYLKDWHFQRL R                 +     +ETP FF DDWLNWWCD+QGQ+DYRFVYIGP GS+T LHHDVLN      +SWSFNVCG+KHWTLFP E TP LYDR+GR+LA DVR    DP+ FP L+ APRLEV Q PGEAIFVPSGWHHQVVN GDG   GG LT+SVN NWFNGFNLD V +FL SEL AVRAAL+HLR+ M G G         EWE QCEL MR NS  NVTDFA +V ARA  LL            D +R RG+GA+                    RG S G   G W +ERW V AL+++ A LR+L  AP  +HVFLDD G
Sbjct:    3 KQVRRLDASTAEYSDFVYVMKNNTP-----------------KDGRADVDFLRQEFGDMEVPVVECSPLEGYGEERRVSMTLREYLDAVH----DGERPEPTGGSSSDSGGGPVLYLKDWHFQRLVRXXXXXXXXXXXXXXXXXASAAGAMETPSFFRDDWLNWWCDRQGQDDYRFVYIGPPGSFTGLHHDVLN-----SFSWSFNVCGSKHWTLFPTEATPDLYDRYGRDLAKDVRSGRADPDKFPRLDAAPRLEVYQGPGEAIFVPSGWHHQVVNTGDGREGGGGLTVSVNTNWFNGFNLDKVAAFLHSELSAVRAALDHLRETMSGGGGAGGTGGRREWENQCELVMRANSSFNVTDFARLVTARAQHLLGARAAQDSLCDDDPERCRGSGAS-------------------GRGSSSGS--GAWQQERWVVLALQQLRAVLRELLVAPSADHVFLDDGG 418          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: A0A024TFP1_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFP1_9STRA)

HSP 1 Score: 251 bits (640), Expect = 3.850e-75
Identity = 146/362 (40.33%), Postives = 198/362 (54.70%), Query Frame = 1
Query:  253 IRRLDASVAKYSDFADT-MTSNHPVILYNFEGLLPSFKRWQKQGKADVD--FLRGAFGNMVVPVVECS-SEGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGLYLKDWHFQRLRRDGGRDSGDGENVETPFFFADDWLNWWCDKQG---QEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARAIFLLSDEKRSR 1317
            + R+DAS   Y +F    M  N PV++ N     P ++ W++    DV+  FLR  FG+ VVPVV    +EGYG + + +MTL  YL  +  G+         ++  Q+       Y+KDWHF R       D  +     TP FF DDWLNWW D+     ++DYRFVY+GP GS TPLHHDVL       YSWS N+CG K W LFP   T  L+DR GR  AT+  +   D   FP L  A  + VVQ  GEA+FVPSGW+HQV NL         T+SVN+NWFN ++L+ + +FL  EL AV   + H R     + EW   C++ +R N G++  D A+++ AR  + LS +   R
Sbjct:    7 VPRVDASDLSYDEFCKQYMGPNRPVLITNIGADWPIYQTWRQGDNGDVNVAFLRAHFGDAVVPVVGYGKTEGYGGEDRGTMTLDAYLALLESGK---------AEAKQQ-------YMKDWHFTR-------DFPETAAYTTPIFFQDDWLNWWWDQPTTPTRDDYRFVYLGPAGSTTPLHHDVLL-----SYSWSINICGRKEWLLFPPTETWKLWDRSGRCTATNATE--FDATQFPHLATAHHVRVVQGVGEALFVPSGWYHQVQNLDRD------TLSVNHNWFNAYSLEQMWAFLQHELAAVEREIGHCRDSFDSDDEWLDHCQVVLRANIGMSYVDVAALLRARKAWYLSADDAIR 332          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: W4GAV2_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAV2_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.750e-72
Identity = 135/356 (37.92%), Postives = 195/356 (54.78%), Query Frame = 1
Query:  250 EIRRLDASVAKYSDFADT-MTSNHPVILYNFEGLLPSFKRWQKQGKADVD--FLRGAFGNMVVPVVECSS-EGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGLYLKDWHFQRLRRDGGRDSGDGENVETPFFFADDWLNWWCDKQGQ--EDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARAIFLLS 1299
            E+ R+DA+   Y  F +  M  N PV++ N     P +  W++    DV+  +LR  FG+  VPVV     + YGE+ + +M L  YL  +  G         ++  +Q+       Y+KDWHF R       D   G    TP +F DDWLNWW D+Q    +DYRFVY+GP  S TPLHHDVL       YSWS N+CG K W +FP   T  L DR GR  A       +D   FP +  A  ++VVQ  GEA+FVPSGW+HQV NL       G T+S+N+NWFN ++L+ + +F+ +EL AV   ++H R+    + +W   C++ +R N G++  +FA+++ AR  + L+
Sbjct:    8 EVPRIDAAALSYEAFCELYMAPNRPVLIRNIGLDWPIYHAWRRSEHNDVNHAYLRATFGHATVPVVGYGRLDAYGEEDRCTMPLAMYLTLLESG---------EAQAAQK-------YMKDWHFTR-------DFPHGPVYTTPEYFQDDWLNWWWDQQADIHDDYRFVYLGPANSTTPLHHDVLL-----SYSWSINICGKKEWLMFPPTETWKLRDRSGRYTAPSANT--VDATAFPNVTSARYIKVVQEVGEALFVPSGWYHQVRNLE------GTTLSINHNWFNAYSLERMWAFMQAELHAVEQEIDHCRETFDSDDDWHHHCQVLLRANIGMHFNEFAALLQARKDWYLT 327          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: A0A485KUP5_9STRA (Aste57867_11851 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUP5_9STRA)

HSP 1 Score: 242 bits (617), Expect = 5.860e-72
Identity = 142/363 (39.12%), Postives = 194/363 (53.44%), Query Frame = 1
Query:  244 DREIRRLDASVAKYSDFADT-MTSNHPVILYNFEGLLPSFKRWQKQ-GKADVDFLRGAFGNMVVPVVEC--SSEGYGEQ--RQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGLYLKDWHFQRLRRDGGRDSGDGENVETPFFFADDWLNWWCDKQ-GQEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARAIFLLSDEKR 1311
            D  I  +DA+V  Y  F DT M  N PV++ N     P F++W+   G+ D + L  AFG+  VPVV    +  GYGE   RQ+ M L +YL  +                   A+G +  Y+KDWHF R       D        TP +F DDWLNWW  ++   +DYRFVY GP GS+TPLHHDVL       YSWS N+ G K W L+P   TP L DR GR  A D      +   FP +  A  + +VQ  G A+FVPSGW+HQV NLG+       T+S+N+NWFN + L  + +FL  EL+AV   + H R     + EW   C+L +R N G+N+ +F  ++VAR  +  ++++R
Sbjct:   10 DGGIDVVDAAVLSYEAFCDTYMAKNVPVLVSNVGADWPVFRQWRDATGRVDHNALAAAFGDAQVPVVSFGQAEAGYGEDEDRQL-MRLGDYLVLL-------------------ATGQSQRYMKDWHFTR-------DFPTAAMYTTPLYFQDDWLNWWWGRKCDNDDYRFVYFGPGGSFTPLHHDVLE-----SYSWSINIVGQKEWLLYPPSQTPKLLDRFGRTSARDATT--ANATQFPGVASARHVTIVQDVGTALFVPSGWYHQVRNLGE-------TLSINHNWFNAYTLRRIWAFLQRELQAVEREIAHCRDGFDSDDEWTNHCQLLLRANIGMNMGEFRDLLVARLKYYDTNDQR 331          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: A0A8K1CS59_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS59_PYTOL)

HSP 1 Score: 238 bits (606), Expect = 2.980e-70
Identity = 143/357 (40.06%), Postives = 184/357 (51.54%), Query Frame = 1
Query:  250 EIRRLDASVAKYSDFADT-MTSNHPVILYNF-EGLLPSFKRW---QKQGKADVDF--LRGAFGNMVVPVVECSSEGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGLYLKDWHFQRLRRDGGRDSGDGENVETPFFFADDWLNWWCDKQGQ--EDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARAIFL 1293
            EI  +DA    Y  F    M  N PV L N  +   P    W   Q  G+  +++  LR  +G+  VPVV+  S  YG Q Q +M   +YLD +   R           G Q        YLKDWHF                  TP +F DDWLNWW D++ +  +DYRFVYIGP GSWTPLHHDV        YSWS NVCG K W  F  +    L D+ GR +  D+     D + +P    A  L VVQ  GEAIFVPSGW+HQV N+ D       TIS+N+NWFNGFN+  + SF  SE  AV   LEHL++  L   ++  QC+L M+ N+G+N  +F  +V A+ + L
Sbjct:    2 EIEVVDARTLSYEAFCTQYMAQNRPVRLVNVVKKWFPQACAWRVTQDTGEMAINYGYLRANYGDQEVPVVDGESTEYGCQAQSTMRFADYLDLMQQKRA----------GKQ--------YLKDWHFVHAVHPS------PPLYTTPVYFQDDWLNWWWDRKDESSDDYRFVYIGPAGSWTPLHHDVFR-----SYSWSVNVCGQKEWIFFHPDEESKLKDKFGRTVLPDITSKDYDKDLYPRAHEATPLYVVQDSGEAIFVPSGWYHQVRNVRD-------TISINHNWFNGFNILEIWSFFKSEYAAVETELEHLKEIGLTGLDFRDQCQLIMQANTGMNYVEFRQLVEAKVLDL 322          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: A0A6G0WBZ8_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBZ8_9STRA)

HSP 1 Score: 236 bits (603), Expect = 5.040e-70
Identity = 132/348 (37.93%), Postives = 181/348 (52.01%), Query Frame = 1
Query:  250 EIRRLDASVAKYSDF-ADTMTSNHPVILYNFEGLLPSFKRW-QKQGKADVDFLRGAFGNMVVPVVEC-SSEGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGLYLKDWHFQRLRRDGGRDSGDGENVETPFFFADDWLNWWCDKQGQEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARA 1284
            EI  +D     Y +F A+ M  N PV++ N       F+RW Q  G+ D  +L   +G   VPVV   +S  YGE+ + +++L  Y+  +                  E +     Y+KDWHF R       D  +     TP FF DDWLNWW D++G +DYRFVY+GP+GS+TPLHHDVL       YSWS N+ G K W LFP   T  L +R GR  +  ++    DP  FP    A RL +VQ  G A+FVPSGW HQV NL +       T+S+N+NWFN + L  +  F   EL+AV   + H R       EW   C+L +R N G+N  +F  ++ ++A
Sbjct:    4 EIAVVDGEFLSYEEFCAEFMAKNVPVLIKNIGKDWSVFQRWIQSDGRLDRAYLTQMYGQAQVPVVSYDTSNAYGEEDRSTVSLETYMAGL------------------EETPPPKRYMKDWHFTR-------DFPNDSIYITPRFFTDDWLNWWWDRKGGDDYRFVYLGPKGSFTPLHHDVLQ-----SYSWSINIAGQKEWILFPPSETWKLKNRFGRTPSGSIKT--CDPAEFPHAASAQRLTIVQDIGTALFVPSGWFHQVTNLTE-------TLSINHNWFNAYTLRLIWVFFQQELQAVEHEIAHCRDSFESVAEWREHCQLILRANIGMNYDEFHQLLQSKA 312          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: A0A329T2P2_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T2P2_9STRA)

HSP 1 Score: 238 bits (606), Expect = 5.300e-70
Identity = 142/355 (40.00%), Postives = 186/355 (52.39%), Query Frame = 1
Query:  265 DASVAKYSDF-ADTMTSNHPVILYNF-EGLLPSFKRWQKQGKADVDFLRGAFGNMVVPVVECSSEGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGL-YLKDWHFQRLRRDGGRDSGDGENVE-TPFFFADDWLNWWCD--KQGQEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARAIFLLSDEKR 1311
            DA    Y DF A  M  N PV+L N  +      ++W+   K +  +L+  +G  + PVV      YG + + +M L EYLD +  G                    AG  YLKDWHF             G +V  TP FF DDWLNWW D  ++ + DYRFVY+GP GSWTPLH DV        YSWS NVCG K W  +  +    L DR GR + +DV    +D EN+P    A  + V+Q  G+AIFVPSGW+HQV NL D       TIS+N+NWFNG+N+  +  F   E  AV   LE L++  L   E+  QC+L MR N+G+N  +F  ++ A+A  LL  EKR
Sbjct:    5 DAMTLSYEDFCARYMAPNRPVLLRNVTDAWFSKARQWRDGRKINFKYLKEHYGAALAPVVSGDVAEYGAEDRWTMRLDEYLDLIENGT-------------------AGKKYLKDWHFVHAF---------GHDVYVTPPFFKDDWLNWWWDHKEKSESDYRFVYLGPAGSWTPLHQDVFR-----SYSWSVNVCGRKKWVFYHPDDESKLKDRFGRLVVSDVTVGNIDKENYPHFHEAKPVYVIQETGDAIFVPSGWYHQVENLED-------TISINHNWFNGYNVRELWDFFKKEYAAVERELEDLKEMGLVGREFVDQCQLVMRANTGINYLEFRELLYAKARELL--EKR 317          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: G4YKL4_PHYSP (JmjC domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKL4_PHYSP)

HSP 1 Score: 236 bits (602), Expect = 6.880e-70
Identity = 136/363 (37.47%), Postives = 187/363 (51.52%), Query Frame = 1
Query:  265 DASVAKYSDF-ADTMTSNHPVILYNF-EGLLPSFKRWQKQGKADVDFLRGAFGNMVVPVVECSSEGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGLYLKDWHFQRLRRDGGRDSGDGENV-ETPFFFADDWLNWWCD--KQGQEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARAIFLLSDEKRSRGTGATVE 1338
            DA+   Y  F A  M  N PV+L N  +   P   +W+   + +   L+  +G    PV       YG + + ++ L EYL+ +  G          + G +        YLKDWHF             G +V ETP FF DDWLNWW D  ++ + DYRFVY+GP GSWTPLHHDV        YSWS NVCG K W  +  +  P L DR GR +  DV  + +D E +P    A  + V+Q  G+AIFVPSGW+HQV NL D       TIS+N+NWFNG+N+  +  F   E  AV   LE L++  L   E+  QC+L M  N+G+N  +F  ++ A+A +LL+  +       T +
Sbjct:    5 DAATLSYEAFCARYMARNRPVLLRNVTDKWFPGAAQWKDGQRINFQHLKAKYGAAEAPVASGDVAEYGAEERCTLRLDEYLELIENG----------TVGKR--------YLKDWHFVHAF---------GHDVYETPPFFKDDWLNWWWDHKEKSESDYRFVYLGPAGSWTPLHHDVFR-----SYSWSVNVCGRKEWIFYHPDDEPKLKDRFGRFVLPDVTAEDVDREKYPHFHEAKPIYVIQETGDAIFVPSGWYHQVRNLED-------TISINHNWFNGYNVRELWEFFKREYAAVEHELEDLKEMGLVGREFVDQCQLVMLANTGINYVEFRELLYAKASYLLAQRELPESDRPTAQ 328          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: A0A225X319_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X319_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.030e-69
Identity = 137/350 (39.14%), Postives = 182/350 (52.00%), Query Frame = 1
Query:  265 DASVAKYSDF-ADTMTSNHPVILYNF-EGLLPSFKRWQKQGKADVDFLRGAFGNMVVPVVECSSEGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGL-YLKDWHFQRLRRDGGRDSGDGENV-ETPFFFADDWLNWWCD--KQGQEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARAIFLL 1296
            DA+   Y DF A  MT N PV+L N  +   P   +W+   K +   L+  +G  + PV       YG + + +M L EYL+ +  G+                   AG  YLKDWHF             G ++ ETP FF DDWLNWW D  ++   DYRFVY+GP GSWTPLH DV        YSWS NVCG K W  +  +    L DR GR +  DV    +D E +P+   A  + V+Q  G+AIFVPSGW+HQV NL D       TIS+N+NWFNG+N+  +  F   E  AV  ALE L++  L   E+  QC+L M  N+G+N  +F  ++ A+   LL
Sbjct:    5 DAATLSYDDFCARYMTPNRPVLLRNVTDKWFPKAAQWRDGQKINFKHLKEFYGAALAPVTSGDVAEYGAEDRCTMRLDEYLELIESGK-------------------AGKRYLKDWHFVHAY---------GHDIYETPPFFKDDWLNWWWDHKEKSDSDYRFVYLGPAGSWTPLHQDVFR-----SYSWSVNVCGRKEWVFYHPDDESKLKDRFGRFVVPDVAVGNIDKEKYPQFHEAKPVYVIQETGDAIFVPSGWYHQVKNLED-------TISINHNWFNGYNIRELWGFFKREYAAVEHALEDLKEMGLVGREFVDQCQLVMLANTGINYVEFRELLYAKTNVLL 314          
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Match: W2R2S1_PHYPN (JmjC domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R2S1_PHYPN)

HSP 1 Score: 236 bits (601), Expect = 3.350e-69
Identity = 134/345 (38.84%), Postives = 180/345 (52.17%), Query Frame = 1
Query:  265 DASVAKYSDF-ADTMTSNHPVILYNF-EGLLPSFKRWQKQGKADVDFLRGAFGNMVVPVVECSSEGYGEQRQMSMTLLEYLDAVHGGRQDGDGDSTQSDGSQEASGGAGL-YLKDWHFQRLRRDGGRDSGDGENVETPFFFADDWLNWWCD--KQGQEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNVCGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSFLSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVARA 1284
            DA+   Y +F A  M  N PV+L N  +   P   +W+   K +  +L+  +G  + PVV      YG + + +M L EYLD +  G                    AG  YLKDWHF          +   E   TP  F DDWLNWW D  ++ + DYRFVY+GP GSWTPLHHDV        YSWS NVCG K W  +  +  P L DR GR +  DV    +D E +P+   A  +  +Q  G+A+FVPSGW+HQV NL D       TIS+N+NWFNG+N+  +  FL  E  AV   LE L++  L   E+  QC+L M  N+G+N  +F  ++ A+A
Sbjct:    5 DATTLSYEEFCARYMAPNRPVLLRNVTDTWFPKAMQWRDGRKINFKYLKEHYGAALAPVVSGDVAEYGAEDRWTMRLEEYLDLIENGT-------------------AGKKYLKDWHFVH--------AFGHEIYVTPPLFKDDWLNWWWDHKEKSESDYRFVYLGPTGSWTPLHHDVFR-----SYSWSVNVCGRKKWIFYHPDDEPKLKDRFGRFVVPDVTVANIDKEQYPQFHEAKPMYAIQETGDAVFVPSGWYHQVENLED-------TISINHNWFNGYNVRELWGFLKREYSAVELELEDLKEMGLVGREFVEQCQLVMLANAGINYLEFRELLYAKA 310          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig909.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPG4_ECTSI3.160e-15554.43JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A024TFP1_9STRA3.850e-7540.33JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
W4GAV2_9STRA1.750e-7237.92JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A485KUP5_9STRA5.860e-7239.12Aste57867_11851 protein n=1 Tax=Aphanomyces stella... [more]
A0A8K1CS59_PYTOL2.980e-7040.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WBZ8_9STRA5.040e-7037.93JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A329T2P2_9STRA5.300e-7040.00JmjC domain-containing protein n=1 Tax=Phytophthor... [more]
G4YKL4_PHYSP6.880e-7037.47JmjC domain-containing protein n=1 Tax=Phytophthor... [more]
A0A225X319_9STRA1.030e-6939.14JmjC domain-containing protein n=1 Tax=Phytophthor... [more]
W2R2S1_PHYPN3.350e-6938.84JmjC domain-containing protein n=7 Tax=Phytophthor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig909contigA-nodosum_M_contig909:78964..84373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FPG4
PFAMsCupin_8
Model size1536
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue3.4e-157
EggNOG OGsKOG2131@1|root,KOG2131@2759|Eukaryota
DescriptionCupin-like domain
Cds size1308
COG categoryT
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig909.5.2prot_A-nodosum_M_contig909.5.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig909 78964..84145 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870357.0257647-CDS-A-nodosum_M_contig909:78963..794701680870357.0257647-CDS-A-nodosum_M_contig909:78963..79470Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig909 78964..79470 -
1680870357.0423136-CDS-A-nodosum_M_contig909:80011..801531680870357.0423136-CDS-A-nodosum_M_contig909:80011..80153Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig909 80012..80153 -
1680870357.056168-CDS-A-nodosum_M_contig909:80407..804881680870357.056168-CDS-A-nodosum_M_contig909:80407..80488Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig909 80408..80488 -
1680870357.0688725-CDS-A-nodosum_M_contig909:80776..808811680870357.0688725-CDS-A-nodosum_M_contig909:80776..80881Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig909 80777..80881 -
1680870357.0792336-CDS-A-nodosum_M_contig909:81311..815221680870357.0792336-CDS-A-nodosum_M_contig909:81311..81522Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig909 81312..81522 -
1680870357.0893707-CDS-A-nodosum_M_contig909:81750..818081680870357.0893707-CDS-A-nodosum_M_contig909:81750..81808Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig909 81751..81808 -
1680870357.101272-CDS-A-nodosum_M_contig909:82183..822941680870357.101272-CDS-A-nodosum_M_contig909:82183..82294Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig909 82184..82294 -
1680870357.1110463-CDS-A-nodosum_M_contig909:84052..841451680870357.1110463-CDS-A-nodosum_M_contig909:84052..84145Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig909 84053..84145 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870357.120694-UTR-A-nodosum_M_contig909:84145..843731680870357.120694-UTR-A-nodosum_M_contig909:84145..84373Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig909 84146..84373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig909.5.2

>prot_A-nodosum_M_contig909.5.2 ID=prot_A-nodosum_M_contig909.5.2|Name=mRNA_A-nodosum_M_contig909.5.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=436bp
MAIPTDREIRRLDASVAKYSDFADTMTSNHPVILYNFEGLLPSFKRWQKQ
GKADVDFLRGAFGNMVVPVVECSSEGYGEQRQMSMTLLEYLDAVHGGRQD
GDGDSTQSDGSQEASGGAGLYLKDWHFQRLRRDGGRDSGDGENVETPFFF
ADDWLNWWCDKQGQEDYRFVYIGPRGSWTPLHHDVLNRRGSNDYSWSFNV
CGAKHWTLFPKEVTPFLYDRHGRNLATDVRKDFLDPENFPELEGAPRLEV
VQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFNLDSVRSF
LSSELEAVRAALEHLRQDMLGEGEWERQCELAMRTNSGLNVTDFASIVVA
RAIFLLSDEKRSRGTGATVERTGWASITGESESDFRESRGDSGGGDRGVW
HEERWKVFALEKIAAALRDLSTAPFVNHVFLDDAGL
back to top

mRNA from alignment at A-nodosum_M_contig909:78964..84373-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig909.5.2 ID=mRNA_A-nodosum_M_contig909.5.2|Name=mRNA_A-nodosum_M_contig909.5.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5410bp|location=Sequence derived from alignment at A-nodosum_M_contig909:78964..84373- (Ascophyllum nodosum dioecious)
AAGATCAGTTTGCTGCTGTTACTGGCTGTTCCTGCTTATCCCACAGGCTC CACCAACCGCGATTGATCTTCAGTATCAAGCGCCCGTTGGAATCTTGTCT TCAAGTACCTGGAAGCCAGGGCGGAAGTTTCGATCTTGAGGCCAAAACAA CAAAGCACTATAGTAGTACTTCGTACAAGATTACTGAACACAGTTTATTT ACTATTTAACTGCAGTGCGTACAGTAGTATGGCGATACCTACCGATCGAG AAATACGAAGACTGGACGCATCGGTCGCCAAGTACTCGGATTTCGCCGAC ACCATGACATCAAATCATCCGGTCAGCCCGAGTTTGGTCTACTGTGTTGC GTGGCAAGTTGTCTCATGTACCTCAGCTATCTAATTAACATTGGAAAAAT GGCACATGTACGCACGTCGCTGTGCATGTAAGACGAAGAAGGTTCGCTAT CGGGGCTACTGTAAATACATATGTGTGTGTTGTATTTTCTTCCCATTCAT TCTGGACATCAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGGAGGAA GGTCACACAGGATTTCTCATCCACCTTCTTTCTGCGGTGCGTGCCTTACT TTTTCTCGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAG TCGAATTTTGTGTACTAACGATTTAATCGTTCTCCACCCGTTGGGCATTT TTAGTTTTGTTTTTTAGTTTTTTAGTGAGAAAAATCCCGTTTGCCGGGAT CGAACTCACGTCCCAACGTGTCAGAGGGTTACGAGGTACCTCTGAGCTAC CGGGGCGACCGGCACATATGCATAATTGTTTTGGGTGGTAAAGTTTGTCG GGCCGTTACCTTAGACACTCGTTCATTCAGCCGCTTACCATTCGAATGAC CCTCGATGTGTTTTTTTGTGCGTGTTTGTAAAATTGACAAAAGCCAAACC GTGGGGATCGAAAGTCCCCGATGTTGTCACTCCAAAGTTGGTACCCTTGT AGTCAGCGCTGTTACCTCTCGTGGGCCCGGTCTAAACGACCCACCCACTT TCCAAACTATACGTTCGGAGTCGTTTCTCAACGTGTTCTCTCCTTTTACG CTATAAATACTTTCGGGAACTGTAAGAACAGCTCGCGCCACCACGATCAC CGATAAACGATGTTCTCAACCTTGCATAGGCACGGGCTCTTCATCCGGCG TGCTCAACCTTCCGAACATGAACTCCAAGTTCCAGCCCGTTCATGGAGAA CTACCCCTTAGAAATTGAGGAAAGGGCTTTCGGGGTTATGCCGCTCGACC TCCAATCAAGATGCTGTAGGATATTTTGTTGTGAGGCTCGTGGTCATACA AAAAGTTGAACATTGTAGATACCTTCTAATAGATAGTAACAAAGGCCCGT AGTGAATTTCGTACAGCGGAGTAGATCAGACGAGGTGTTCGAACGTGAGC CTAGGAGGTGCATTTTCCAAAGTTGAGCATTCCAAAACTTTGGCAGTGGA CAACAGCGAAAACTTTTGAAGGGGTACGCTCAGGCTTTTTCTGTCCAAAC TTTTGAAAATATTTTGGCCTGTTCAGACCGGCCCTTGCCGGCGTCAGTCA ACTTCTTCCCTGAGCTTTATCTCTCTTGAGACCCACAATCCTGGTGGCAT CGGCAGCGAGACCCCAAGGCTAAGATTTAATTTCACCTCATTCACGATTC GCTTCCGCCATGTTGGTCGCGAAGAGGATCACGACATCGGTGGTTATCGG ACCCCTCGGTTAATCTTTCGCTTTCGTCAAGCTGGTGATAAGATCACTGA ACCACACACCCTCAGTCATCCGCACAAACACTCGGAGCGAACCGCTGGAG CTGTGTTTAAAGAAAAATCAGAAGGCGCCTAGACCTTCTGAGCATCCCCC AGTCGTTGTGTAAACACATGCCAAGCTTTCGGAAGTTACAGTATTACAGG ATAGGAAACAAGGTCTTGGAGAGACGGTTGGTCTTACAGTAGAGCTATAT TTCCAACCGTTTTCTTGTCGCATTTCCCTTCCCTTATAAACCCCCCTGTA CGCGATGCTTTTTTTTCTCGAGAACCTAGGTGATTCTCTACAACTTCGAA GGACTGCTTCCCTCATTCAAACGGTGGCAAAAGCAGGGTAAAGCTGATGT CGACTTTTTGCGAGGAGCTTTCGGAAACATGGTAGTACCGGTAAGATTCG AGGGCGAAGCTCCCCCGACCTACGAAAAAGGAAAAGGCCCAACTTCTTTT GTGACATCGAAGCATGAGCATCTTGTGAGCAAGGTATAACGTTTCCAAGC CGGAACGAAGTGACGCAAGTGTTTTTTGTTTCGCTTGCCACGTCATCATT ACAGGCACAGAAAGGTATTCATAGAACGGTCTATCATAGTTTCGTCGCAT CGAGGACACACCCGTATGCAGGGCTGCTACCGCGTTCAACCGACGGGTTC AAGTATGTCTTTGGAAGAGGCACTAACACGCCACGAGGTGCACTGATGAC CAAGCTTCAATGATCTCAAAACTGTGTGCAATGTACTTGCGTCGTACTCC TGGCGAGGCGCGCAGGTGGTCGAGTGCTCTTCTGAAGGATATGGAGAACA GCGACAGATGTCCATGACTCTCCGTGAGTGAGGTGTCCCGCTGGCGACTT TGGTTTCCTCCGTTATCTTGGTTCTCGTCGCGCATTTTAGCTCTATCACT CTATCCCTTTTTCTTTTCTGGGGACGCTTACCGTGTTCGCCTTCTTCGTC TGTTGAACTCGTGGCACGACGAAGACGCTCTCGATCCTGTGTTAGCGTGT GAGTCACCAACAAAACACGTTTATCTGTCTTCTGATCCATACTCGAGGAA GTCGAGTACCTAGACGCAGTTCACGGTGGCCGTCAAGACGGAGACGGTGA TAGTACTCAGTCCGATGGCAGCCAGGAGGCCTCTGGCGGCGCCGGCCTCT ACCTGAAAGACTGGCATTTTCAGAGACTGCGACGAGACGGAGGGAGGGAT TCGGGTGATGGAGAAAACGTGGAGACACCCTTCTTCTTTGCGGACGACTG GCTCAACTGGTGGTGGGGATTATGTTGTAGGCGTTCCTCTTTTCTCCTCA GATGTGTGCCTACGTGGGGGTGATTATTTGGGGTGATTACTTGAGTCAAA ACCGCCTGATGCTGGGTTGATCACCAGTTGATTGAACTGAAGTTATCGTG CCCCCTGAGACATGGTGGCTGGGGCGTCTTGATATAGCACCATACATGCG CACGAGTAAACGACAAGGAACTAAGCGCGTTGCGGCCGACCTTCTGAAAG CGTCATCTAGTGACTCATTGACGAGTCATGATGAGCCATGATAACGCAGT CCGACGGGCCAGGGGGAGGGGGGTCTCATTCGCGCGGAGGATCACTATAT TTGAATGAACCGGCGGATAAAGATTCGCCGCTCTTCTCCGCTTCGCCCTC GTTTTGAGGCAAAATATGTCGTCCCACTGCGTCGCGGTATAGGTGCGACA AGCAAGGTCAGGAAGACTACCGCTTCGTATACATCGGGCCACGAGGTTCG TGGACCCCACTCCACCACGACGTGCTCAACAGGCGAGGCAGCAATGAGTC TGGATTGGCAACCACAATACTCATAAAAAACACGCAAGGCGTGTGTCCCT GTTGATTCATGGGTTTTTGGGGGACCATCTGCAGGAGTCTCCCCTTGAGG TTTAACCCTTTATGGGTCGCATCTCCACTCTGCTGCTGTGTGCGATCGAC CAGTCTTTCTGCACTTCCGTTCTGATACTGCTGGGTAAACAGCGTCTGGC TTGCCAATTATCCTCGTGCGCAGTACGGTAATTCATTCAGTCTCGCAACC CCGTCCTTCGGTTCGCTTGACCACGCTACGTTTAGCTACAGCTGGTCGTT CAATGTTTGCGGCGCCAAGCACTGGACACTGTTCCCGAAAGAGGTCACGC CATTTCTGTATGACAGGTGATGAACCATCTTATGAAGTCCTTGCTCAAGC TGCTTTTTTTTCTTCCCCCACCTCTATACTGGTTGTAGTCTTGACTAAGG TAATTTTACGATTACTATTTAATTATTTACTATTTTTTTCGAACGCTGTC GACGACGAGAGTACAGCGTTCAGTTCAGCTGGAACCGTTAGACTTTACTA TTCATACATTTGAAGATGTGCATAGTGCGGCACCGCTATCCCGATGAGAT TTTTATGCTCGCCGTTGTAGACATGGGCGAAACTTGGCCACAGACGTCCG CAAGGACTTCCTGGATCCCGAAAACTTCCCCGAGCTGGAGGGTGCACCCA GGCTCGAGGTTGTGCAGGCACCAGGGGAAGCAATTTTTGTTCCTTCGGGA TGGCACCATCAGGTCAGGTACACCATCAGGTACCATCAGGTACCATCAGG TACCATCATGTGCTTGTATGGCCGTCAAATCCTTTCCAGCTACAAGCAAT GTTGGACTTTGGTTTGCTGCGGCACGACAAGGGTGTGACAATATTGTTAT CAAGCGGAAGTATTCTGTATCCGGCATGATTCGACGTTATTCTTGTTAAT GTAATAATAGTGTGAGGCTGCATGCAAAATGATATTTTTTACGAAGGGCT TTTGGCAAACGCAGCAGAGCTCTTGAAAGCTATAACAAGCTCCACACCCG TTTGGACGTAGTAACTGCACCATTGATCGACGAATTGCTCTGTATCTTGT GACCACGGCTGGATTCGTAGCGGATCAGTTAATGTGAAAAAACAACAACA ACAACAACTCCCCGCAGTTTCTTGAATGTGGTTGACCAATGAAGTCGCGA ATCTCCCATCTTTTCCCAACCCCTTGATTTCTTTCATCAAACGCTGGGAC CGTTCGCAACGAACGATGGGCTTTCAAACGCGCCGCGCCCGCCAACCCAC AAGGTTGTTAACCTCGGAGACGGAGGGTTGCACGGGGGACTGACCATATC GGTCAACAACAACTGGTTCAACGGCTTCAATCTCGATAGCGTGCGGTCCT TCCTCTCTTCGGAACTCGAGGCCGTCAGAGCCGCCCTCGAACATCTCCGA CAAGACATGTTAGGGGAAGGGGAGTGGGAGAGGCAGTGCGAGCTGGCCAT GCGCACAAACAGCGGTCTCAACGTCACCGACTTCGCTAGCATCGTCGTGG CCCGGGCGATTTTTCTTCTGTCTGACGAGAAACGTTCGCGAGGAACGGGC GCGACGGTTGAGCGGACAGGGTGGGCATCGATCACGGGGGAGTCTGAGAG CGACTTCCGTGAAAGTCGGGGCGACAGCGGCGGTGGCGATCGCGGGGTGT GGCACGAGGAGCGATGGAAAGTGTTCGCCCTGGAGAAGATAGCGGCAGCG TTGCGAGATCTATCGACCGCACCTTTCGTTAACCACGTGTTCTTGGACGA TGCCGGTCTA
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig909:78964..84373-

>mRNA_A-nodosum_M_contig909.5.2 ID=mRNA_A-nodosum_M_contig909.5.2|Name=mRNA_A-nodosum_M_contig909.5.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1308bp|location=Sequence derived from alignment at A-nodosum_M_contig909:78964..84373- (Ascophyllum nodosum dioecious)
ATGGCGATACCTACCGATCGAGAAATACGAAGACTGGACGCATCGGTCGC
CAAGTACTCGGATTTCGCCGACACCATGACATCAAATCATCCGGTGATTC
TCTACAACTTCGAAGGACTGCTTCCCTCATTCAAACGGTGGCAAAAGCAG
GGTAAAGCTGATGTCGACTTTTTGCGAGGAGCTTTCGGAAACATGGTAGT
ACCGGTGGTCGAGTGCTCTTCTGAAGGATATGGAGAACAGCGACAGATGT
CCATGACTCTCCTCGAGTACCTAGACGCAGTTCACGGTGGCCGTCAAGAC
GGAGACGGTGATAGTACTCAGTCCGATGGCAGCCAGGAGGCCTCTGGCGG
CGCCGGCCTCTACCTGAAAGACTGGCATTTTCAGAGACTGCGACGAGACG
GAGGGAGGGATTCGGGTGATGGAGAAAACGTGGAGACACCCTTCTTCTTT
GCGGACGACTGGCTCAACTGGTGGTGCGACAAGCAAGGTCAGGAAGACTA
CCGCTTCGTATACATCGGGCCACGAGGTTCGTGGACCCCACTCCACCACG
ACGTGCTCAACAGGCGAGGCAGCAATGACTACAGCTGGTCGTTCAATGTT
TGCGGCGCCAAGCACTGGACACTGTTCCCGAAAGAGGTCACGCCATTTCT
GTATGACAGACATGGGCGAAACTTGGCCACAGACGTCCGCAAGGACTTCC
TGGATCCCGAAAACTTCCCCGAGCTGGAGGGTGCACCCAGGCTCGAGGTT
GTGCAGGCACCAGGGGAAGCAATTTTTGTTCCTTCGGGATGGCACCATCA
GGTTGTTAACCTCGGAGACGGAGGGTTGCACGGGGGACTGACCATATCGG
TCAACAACAACTGGTTCAACGGCTTCAATCTCGATAGCGTGCGGTCCTTC
CTCTCTTCGGAACTCGAGGCCGTCAGAGCCGCCCTCGAACATCTCCGACA
AGACATGTTAGGGGAAGGGGAGTGGGAGAGGCAGTGCGAGCTGGCCATGC
GCACAAACAGCGGTCTCAACGTCACCGACTTCGCTAGCATCGTCGTGGCC
CGGGCGATTTTTCTTCTGTCTGACGAGAAACGTTCGCGAGGAACGGGCGC
GACGGTTGAGCGGACAGGGTGGGCATCGATCACGGGGGAGTCTGAGAGCG
ACTTCCGTGAAAGTCGGGGCGACAGCGGCGGTGGCGATCGCGGGGTGTGG
CACGAGGAGCGATGGAAAGTGTTCGCCCTGGAGAAGATAGCGGCAGCGTT
GCGAGATCTATCGACCGCACCTTTCGTTAACCACGTGTTCTTGGACGATG
CCGGTCTA
back to top