prot_A-nodosum_M_contig909.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig909.4.1
Unique Nameprot_A-nodosum_M_contig909.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length508
Homology
BLAST of mRNA_A-nodosum_M_contig909.4.1 vs. uniprot
Match: A0A6H5KTR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTR9_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 7.670e-26
Identity = 184/420 (43.81%), Postives = 208/420 (49.52%), Query Frame = 0
Query:    1 MSARPKKPDARALFKQAKTRKTESSS---AGAGRSAPGKYQGL-----------SKEQMLALLRAKKAGNTTGQKAAHGASIPSVEARRRAP--SPPPAVQIHGVKVVPKATPA----------APKGQVQAGSQGLTGLLGIGAADSSXXXXXXXXXXXXGVGGKGVVGSSGAGEPKVTTPQVNAEPAASV--------PEGLPAGFFDEGVEPPASVSTADRVITGGVYGVGAGGRGEADTIPIAAAAAGRFGPERAAELAAQAAVEAEADAVHEAERLAALKAAGVFQAVVVAAD-----APANADEVGAPGTEEGEAAAPNGSALPEGFFDDPEVDAQSRGVDLKAKKKEEERNDWKEFMSFAEEVKXXXXXXXXXXXXXXXXXXXYEELEQATMMGKLAVLMNKFESV-GHKRKR 380
            MS   KKPDARALFKQAK+RK E+S      AG SA     G            SKE++LAL RAKK                    +R +   S  PA        VP  T A          AP+GQVQA   GLTGLLGIGA DSSXXXXXXXXXXXX                    P  +A P +          PEGLPAGFFDE +   A                           P+     GRFG ERAAELAA+         + EAE+LAA++AAG+    VVAAD     A A+               APNGSALPEGFFDDPE+DA+SRGVDLKA+KK                  XXXXXXXXXXXXXXXXXXX    EQATMMG+LA+LMNK ES+   KRKR
Sbjct:    1 MSNHQKKPDARALFKQAKSRKGENSGKNVVSAGGSAVSGRSGAXXXXXXXXXXXSKEELLALYRAKKXXXXXXXXXXXXXXXXXXXTQRPSDKSSGSPATGRKPTVKVPVMTAASGAGRPSVQPAPRGQVQAEGVGLTGLLGIGAGDSSXXXXXXXXXXXX------------XXXXXXRHPGTDAAPVSXXXXXXXXXXPEGLPAGFFDEDL---AXXXXXXXXXXXXXXXXXXXXXXRPQAPPV-----GRFGAERAAELAAEXXXXXXXXXLREAEKLAAMRAAGLL---VVAADGATGGAAADXXXXXXXXXXXXXXXAPNGSALPEGFFDDPEMDAKSRGVDLKAEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLALLMNKSESIITRKRKR 397          
BLAST of mRNA_A-nodosum_M_contig909.4.1 vs. uniprot
Match: W7TUP1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP1_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.340e-8
Identity = 70/248 (28.23%), Postives = 100/248 (40.32%), Query Frame = 0
Query:  275 PGTEEGEAAAPNGSALPEGFFDDPEVDAQSRGVDLKAKKKEEERNDWKEFMSFAEEVKXXXXXXXXXXXXXXXXXXXYEELEQATMMGKLAVLMNKFESVGHKR-----------------KRPSSSSGGNAPRGATESGEISSKNTTKEANDSKGGNEYQLEGRDKDETVRPPSSEMKNKEREDVEMSVEKTGSAMREVAVASAPTDAAATDISSMLQGRKRKKKKELEEAFAGEYVPLDPLDWRAR 505
            P + + E ++ + SALP GFFDDPE DA +  +DL A+K+ E R +W++F  FA +V               XX    +ELE      +LA L+        +R                 K+  + S   A  G     E  +     E  D  G      EGR+K ETV                                      AA +IS+ML+ +KR+KK+ ++E     YV  DPLDWRA+
Sbjct:  200 PSSPKPETSSASTSALPTGFFDDPEADALAHNIDLNAQKEAEARKEWEDFQKFAADVAVAEAGQEAVEEEEWXXEERRKELEHLYYTARLAGLIATSGEATERRMKKRGKDGEXXXXXXXMKKGEAVSNSGALPGVPSKAEAPTWRAVPEDEDGDGKERVGDEGREK-ETV--------------------------------------AALEISAMLREKKRRKKEAMQEVVQDGYVAPDPLDWRAK 408          
BLAST of mRNA_A-nodosum_M_contig909.4.1 vs. uniprot
Match: A0A835ZL64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL64_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.140e-7
Identity = 83/270 (30.74%), Postives = 120/270 (44.44%), Query Frame = 0
Query:  290 LPEGFFDDPEVDAQSRGVDLKAKKKEEERNDWKEFMSFA-----------------------------EE--------------VKXXXXXXXXXXXXXXXXXXXYEELEQATMMGKLAVLMNKFESVGHKRKRPSSSSGGNAPRGATESGEISSKNTTKEANDSKGGNEYQLEGRDKDETVRPPSSEMKNKEREDV-----------EMSVEKTGSAMREVAVASAPTDAAATDISSMLQGRKRKKKKELEEAFAGEYVPLDPLDWRAR 505
            LP+GFFDD EVDA++RG+DL  +K++E   +WKEF  FA                             EE              VKXXXXXXXXXX          E++EQ T   +LA LM + E V  KR+R  SS         T+  +++  +                                  +E +D            E++V      +R+V+ A AP D AA ++S+ML+ +++K+++   EAF G+YVPLDP DWRA+
Sbjct:  226 LPKGFFDDAEVDAKARGLDLAQEKQQEADAEWKEFSKFAAXXXXXXXXXXXXXXXEAKQAAEEGKQAEEEAELEDARLYPQPSGVKXXXXXXXXXXAVAVVNEQEREDMEQLTYQARLAGLMQQSEHVHRKRRRVDSS--------VTDVTDVTHADNGDMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELDDAGXXXXXXXXXEELAV------LRDVSGARAPDDGAALEVSNMLRSKRKKRRQAEREAFEGDYVPLDPSDWRAK 481          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig909.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KTR9_9PHAE7.670e-2643.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TUP1_9STRA9.340e-828.23Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A835ZL64_9STRA1.140e-730.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 324..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig909contigA-nodosum_M_contig909:72044..75889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig909.4.1mRNA_A-nodosum_M_contig909.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig909 72012..76308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig909.4.1 ID=prot_A-nodosum_M_contig909.4.1|Name=mRNA_A-nodosum_M_contig909.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=508bp
MSARPKKPDARALFKQAKTRKTESSSAGAGRSAPGKYQGLSKEQMLALLR
AKKAGNTTGQKAAHGASIPSVEARRRAPSPPPAVQIHGVKVVPKATPAAP
KGQVQAGSQGLTGLLGIGAADSSSDDDDDDKDSDSGVGGKGVVGSSGAGE
PKVTTPQVNAEPAASVPEGLPAGFFDEGVEPPASVSTADRVITGGVYGVG
AGGRGEADTIPIAAAAAGRFGPERAAELAAQAAVEAEADAVHEAERLAAL
KAAGVFQAVVVAADAPANADEVGAPGTEEGEAAAPNGSALPEGFFDDPEV
DAQSRGVDLKAKKKEEERNDWKEFMSFAEEVKKAEKEEEQQEEAVEEDKE
QYEELEQATMMGKLAVLMNKFESVGHKRKRPSSSSGGNAPRGATESGEIS
SKNTTKEANDSKGGNEYQLEGRDKDETVRPPSSEMKNKEREDVEMSVEKT
GSAMREVAVASAPTDAAATDISSMLQGRKRKKKKELEEAFAGEYVPLDPL
DWRARGR*
back to top