mRNA_A-nodosum_M_contig907.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 234 bits (598), Expect = 1.900e-70 Identity = 118/187 (63.10%), Postives = 146/187 (78.07%), Query Frame = 2
Query: 278 MVTYNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTDDLE---TTKVFPPAYDAGTEENNELCSHIPGPACDADSGNLEEGPGEGYVHIQRGVHGIA-DLTASVYDWRNPVAEVFVS 826
+ ++P +V A +VALF+EG+ ASDAIKLMAEDGDNSALL L SDDVAPYICG E P+FP +T R +LT+D+ C D +SVVSMLINTNDAF+GID+DDL ++KVFPPA+DAGTE NNELC+HIPGPAC ADSGN+E+ PGE ++H+ RG HG+ DL + YDWRNPVAEVF++
Sbjct: 32 LQPFSPMLVVA-HTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPV-YSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 216
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 228 bits (581), Expect = 3.830e-68 Identity = 115/187 (61.50%), Postives = 147/187 (78.61%), Query Frame = 2
Query: 278 MVTYNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTDDLE-TTKVFPPAYDAGTEENNELCSHIPGPACDADSGNLEEGPGEGYVHIQRGVHGIA-DLTASVYDWRNPVAEVFVSSA 832
+ ++P V A +V++F+EG ASDA+K+MAEDGDNSAL+ L+ S+DV PYICG + EAPLFP T R +TVD+ IC DA++SVVSMLINTNDAF+GID++ L T KVFPPA+DAGTE NNELC+HIPGPAC ADSGN+E+GPGEG++ + RG HG+ DL + YDWRNPVAEV V+++
Sbjct: 17 LQPFSPMFVVA-HTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESIC-PDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVATS 201
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 228 bits (581), Expect = 7.370e-68 Identity = 114/184 (61.96%), Postives = 142/184 (77.17%), Query Frame = 2
Query: 278 MVTYNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTDDLE--TTKVFPPAYDAGTEENNELCSHIPGPACDADSGNLEEGPGEGYVHIQRGVHGIADLTASVYDWRNPVAEVFV 823
+ ++P ++ A ++VALF+EG A+DAIKLMAEDGDNSALL L ES DVAPYICGV V E P+FP +T R L VD IC + +SVV+MLINTNDAF+GID+D LE +TK FPPA+DAGTE N+E CS+IPGP C A SGN + GPGEGY+H+ RGVHG+ DL + YDWRNPVAE+++
Sbjct: 39 LQPFSPPLIVA-HTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPV-YSVVTMLINTNDAFVGIDSDTLELGSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVGDLEEASYDWRNPVAEIYI 220
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 142 bits (358), Expect = 6.190e-35 Identity = 85/187 (45.45%), Postives = 116/187 (62.03%), Query Frame = 2
Query: 287 YNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTD---DLETTKVFPPAYDAGTEENNELCSHIPGPACDADSGNLEE-GPG-EGYVHIQRGVHGIADLTASVYDWRNPVAEVFVSSA 832
++P I+ A + LF G A AIKLMAEDG+N ++A+ + CG A E PL P +T +T D + C + +SVV+ L NTNDAFMGID D +K+FPPA+DAGTE+NNE C+ +PG AC A + E G G EG++H+ RG++G+ DL+ + Y W+NPVAEV VS A
Sbjct: 88 FSPPIIVAHE-KGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPV-YSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVGDLSKADYGWKNPVAEVVVSKA 269
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 134 bits (338), Expect = 8.930e-33 Identity = 83/187 (44.39%), Postives = 107/187 (57.22%), Query Frame = 2
Query: 287 YNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTD---DLETTKVFPPAYDAGTEENNELCSHIPGPACDADSGNLEE-GPG-EGYVHIQRGVHGIADLTASVYDWRNPVAEVFVSSA 832
++P I+ A LF G A AIK MAE+G N + + + CG AV E PL P +T +T D C + +SVV+ L NTNDAFMGID D +K FPPA+DAGTE+NNE C+ +PG AC A E G G EG++H+ RG+ G+ DL+ + Y W NPVAEV VS A
Sbjct: 31 FSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNGMVKVIATRES---GFCGFAVAEGPLLPGKTWNGEITFDTNKCKEPV-YSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVGDLSKADYGWNNPVAEVVVSKA 213
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.730e-32 Identity = 82/186 (44.09%), Postives = 109/186 (58.60%), Query Frame = 2
Query: 287 YNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTD---DLETTKVFPPAYDAGTEENNELCSHIPGPACDADSG---NLEEGPGEGYVHIQRGVHGIADLTASVYDWRNPVAEVFVS 826
++P I+ A + LF +G A AIK MAE+G N + + +D CG A E PL P +T +T D C +SVV+ L NTNDAFMGID D +K+FPPA+DAGTE+NNE C+ I G AC A NL EG++H+ RG++G+ DL+ + YDW+NPVAEV VS
Sbjct: 17 FSPPIIVAHE-KGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATRED---GFCGFAAAEGPLLPGKTWNGEITFDANKCKRPV-YSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVGDLSQADYDWKNPVAEVVVS 197
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: A0A2A5G8K9_9GAMM (Spondin domain-containing protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A2A5G8K9_9GAMM) HSP 1 Score: 128 bits (321), Expect = 2.620e-30 Identity = 76/185 (41.08%), Postives = 110/185 (59.46%), Query Frame = 2
Query: 281 VTYNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTDDLETTK---VFPPAYDAGTEENNELCSHIPGPACDADSGNLEEGPGEGYVHIQRGVHGIADLTASVYDWRNPVAEVFVS 826
+T+ P +VA+ R V LF+ G AAS+ + +AE GD + L A + +D+ + V L P + S+TV+ + + SV SM++ TND F+ I + + V+ P YDAGTE N+E+C++IPGP C + G E GEGYVHI RG+HGI DL A VYDWRNPVA++ ++
Sbjct: 44 ITFTPILVASHR-NGVTLFEAGSAASEGLTAIAEGGDTAPLAASLSADN---RVAEVKSSGGLLGPGE----SVTVEIKTERHKRRISVASMMLPTNDGFIAIQNIKVPKKRSKTVYSPGYDAGTEPNDEVCANIPGPTCGGE-GLSPEVSGEGYVHINRGIHGIGDLAADVYDWRNPVAKITIT 219
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: A0A3B0WS64_9ZZZZ (Spondin domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0WS64_9ZZZZ) HSP 1 Score: 126 bits (317), Expect = 8.690e-30 Identity = 73/187 (39.04%), Postives = 109/187 (58.29%), Query Frame = 2
Query: 281 VTYNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTDDLETTK-----VFPPAYDAGTEENNELCSHIPGPACDADSGNLEEGPGEGYVHIQRGVHGIADLTASVYDWRNPVAEVFVS 826
+ + P +VA+ R + V +F+ G AAS + ++AE GD S L A + +D+ A V L P ++ + + + SV SM++ TND F+ I ++ K ++ P YDAGTE N+E+C++IPGP C + G+ E GEGYVHI RG+HGI DL A VYDWRNPVA++ ++
Sbjct: 42 INFTPILVASTR-RGVTIFETGSAASAGLTVIAESGDASVLAATLSADEAAD----VQNSGGLLGPGESVTVEIITKSHV----RHISVASMMLPTNDGFIAIQN--IKAPKKGSKTIYSPGYDAGTEPNDEVCANIPGPTCGGE-GSSPEVDGEGYVHINRGIHGIGDLAADVYDWRNPVAKITIT 216
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: F9UIT6_9GAMM (Uncharacterized protein n=1 Tax=Thiocapsa marina 5811 TaxID=768671 RepID=F9UIT6_9GAMM) HSP 1 Score: 124 bits (312), Expect = 1.280e-29 Identity = 80/169 (47.34%), Postives = 102/169 (60.36%), Query Frame = 2
Query: 335 FQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGIDTDDLETTK----VFPP-AYDAGTEENNELCSHIPGPACDADSGNLEEGPG-EGYVHIQRGVHGIADLTASVYDWRNPVAEVFV 823
F G AASD + L+AEDG L AL + P + AP+ P +T ++ + G D SVVSML+NTNDAF+ ID++ L T+ V+ AYDAG+E NNE C+ IPGPAC DSGN E EGYV++ G+H ADL+A+VYDWRNPVA V V
Sbjct: 9 FTLGDAASDELALVAEDGVGQDLAALAST---LPGVADAQATSAPIPPGETVAFQISSNP---GFDV-LSVVSMLVNTNDAFLAIDSEPLPKTRRSSVVYRALAYDAGSEANNEDCAFIPGPACPGDSGNARETVNAEGYVYVHNGMHDSADLSAAVYDWRNPVALVKV 170
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Match: UPI0019FF46AD (Spondin domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FF46AD) HSP 1 Score: 125 bits (315), Expect = 1.930e-29 Identity = 77/184 (41.85%), Postives = 105/184 (57.07%), Query Frame = 2
Query: 284 TYNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDVAPYICGVAVDEAPLFPLQTTRLSLTVDDEICGDDAKFSVVSMLINTNDAFMGID----TDDLETTKVFPPAYDAGTEENNELCSHIPGPACDADSGNLEEGPGEGYVHIQRGVHGIADLTASVYDWRNPVAEVFV 823
T+ P +VA+ R + V +F+ G AAS+ + +AE GD L A +E++D VD A L S+TV + S+ SMLI TND+F+ ++ +TT + P YDAG+E N+E C HIPGP C G+ E G GEGYVHI G+HGIADL A YDWRNP A++ +
Sbjct: 43 TFTPILVASHR-EGVKIFELGSAASNELSTLAEGGDVGPLTAALEANDDV-------VDTANSGGLLMPGASVTVTVSARHGAKEISLASMLIPTNDSFIALNGVKAPKGNKTTVYYSPGYDAGSEPNDEDCMHIPGPVCGGAGGSPEAG-GEGYVHISSGIHGIADLAAETYDWRNPTAKIAI 217 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig907.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig907.2.1 >prot_A-nodosum_M_contig907.2.1 ID=prot_A-nodosum_M_contig907.2.1|Name=mRNA_A-nodosum_M_contig907.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=186bp MVTYNPRIVAAGRLQEVALFQEGVAASDAIKLMAEDGDNSALLALIESDDback to top mRNA from alignment at A-nodosum_M_contig907:25430..28231+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig907.2.1 ID=mRNA_A-nodosum_M_contig907.2.1|Name=mRNA_A-nodosum_M_contig907.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2802bp|location=Sequence derived from alignment at A-nodosum_M_contig907:25430..28231+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig907:25430..28231+ >mRNA_A-nodosum_M_contig907.2.1 ID=mRNA_A-nodosum_M_contig907.2.1|Name=mRNA_A-nodosum_M_contig907.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=558bp|location=Sequence derived from alignment at A-nodosum_M_contig907:25430..28231+ (Ascophyllum nodosum dioecious)back to top |