prot_A-nodosum_M_contig905.6.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig905.6.2
Unique Nameprot_A-nodosum_M_contig905.6.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length626
Homology
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: D8LDU7_ECTSI (BSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU7_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 9.680e-70
Identity = 253/657 (38.51%), Postives = 326/657 (49.62%), Query Frame = 0
Query:   47 RGRQRASAALRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQREVGGGRSFPRHDEEEDEEFAWGDDDQ--------DDEGHDRQNKTDAPTADAAPAGGALGAMDVAHQDAATTPRRRHSE--GSALLSVPGGPAGKDRSSE-------------GEVAVATGDAVASAEIARLTEALASMSG-----------------KAEKMTRERDAALAEAVQLKARVCQSEKDLEQAAARVAELIDAAAAARRDSDARLGKIQDALDASEARAAAAE------------KEAEESFASRKETMAAARVAAGSDGNENAVAMAAEAEAAVKELSRLKKALREERSQHEEILLASSRQAANEAVEAALSSADADREEACAEATASMRAENERKAEELDALRAQLTKSAAAMEEIGTLKADVDELRRAVEIERETAFKAAGEAKQEGEAAKQLREEVRALRAAADQARAMVKGS-------------AGGLMKRG--TNRTDVAGEDTDGWGDDEYD-----SCCAASN--SSGVVVDRPPSLASPDADNGRGRPGNRQKDGVTAAALAGDDRSGGSDVGGRVAPGSARQAERT-GRKEGG---GEGEGDDGWEGWD 625
            R RQ  +AA+RA+R+D+KTY+E +PE+ + RF AF   FD+GA+T+++AT+LKED VVTKIHTQLVP+H++YDDFW+RYFFRAEK+A+ + GGG SFP  D                      D   H   +   +P + ++P+  A          AA  P R  S   G      PGG  G  R                         A A AEI+RLT AL +                    + +++TR+RDAA+AEA QL++ + Q + + ++   +    +DAA  A ++   +L          EA AAA E                                                      LSRLKKA REER++HE +LLAS RQAANEAVEAALSSADADREEACAE  ASM+AE ERK +EL+ALRAQL KS  AMEE+  L+ADV++LRRA E ERE A +AAGEA+QE +  KQLREE+R L+AAA+Q R                    G + +RG    RTD+ G                 SC A+ N  SSGVVVDRP S  SP  D G  R       G    ++ GD                         R+EGG   GEG+G+DGWEGWD
Sbjct:   54 RNRQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDTVVTKIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNEDXXXXXXXXXXXXXXXXXXXXXADFNDHGADDDLPSPPSRSSPSATA----------AARAPARDLSPHAGDGAAGPPGGALGAMRPDSPXXXXXXXXXXXXXXXVKTLASAAAMAEISRLTAALRASEXXXXXXXXXXXXXXXXXXEVDEVTRQRDAAVAEADQLRSSLRQLQTEHQETVNKATADLDAAGGAEQELRRQLA---------EAEAAAEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRLKKAFREERAEHEAMLLAS-RQAANEAVEAALSSADADREEACAELEASMKAEAERKDQELEALRAQLAKSKGAMEEVSALRADVEDLRRAAECEREAAERAAGEARQEADVVKQLREEIRVLQAAAEQPRVSAXXXXXXXXXXXARGPMTGAVSRRGKIAARTDIGGXXXXXXXXXXXXXXXXXSCGASVNTSSSGVVVDRPLSATSPSGDGGTPR-----SQGAGRGSVEGDGXXXXXXXXXXXXXXXXXXXXXXRSRREGGCGSGEGDGEDGWEGWD 685          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: A0A6H5JV15_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV15_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 4.410e-35
Identity = 62/98 (63.27%), Postives = 85/98 (86.73%), Query Frame = 0
Query:   47 RGRQRASAALRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQREVGGGRSFP 144
            R RQ  +AA+RA+R+D+KTY+E +P++ + RF AF   FD+GA+T+++AT+LKEDPVVTKIHTQLVP+H++YDDFW+RYFFRAEK+A+ + GGG SFP
Sbjct:   22 RRRQPVTAAIRAIRADIKTYTEDVPDSQSERFSAFVAKFDLGARTKDVATILKEDPVVTKIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFP 119          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: A0A7S2WTQ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ6_9STRA)

HSP 1 Score: 100 bits (248), Expect = 6.800e-19
Identity = 54/120 (45.00%), Postives = 78/120 (65.00%), Query Frame = 0
Query:   41 RDGKTSRGRQ-RASAALRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQREVGGGRSFPRHDEEEDEEFAWGDD 159
            R     +G+Q R+SA LRA+++D KTYS+ +  AD A F +F+  FD+  KT  I+ LL ++PVV +IH +LVP+HVS + FW RYFFRAE+  +   G   +    DEE++E+  W DD
Sbjct:   67 RQADAPQGKQDRSSAGLRALQADKKTYSDPVANADQAHFQSFSTKFDLAEKTTTISELLSDEPVVARIHAELVPEHVSAETFWMRYFFRAERFMK--PGQSLALGFVDEEDEEDLTWEDD 184          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: A0A6U4E8C6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4E8C6_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.770e-16
Identity = 55/119 (46.22%), Postives = 81/119 (68.07%), Query Frame = 0
Query:   54 AALRAMRSDMKTYSEGIPEADAARFHAFTKCFDV--GAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQREVGGGRS-----FPRHDEEEDEEFAWGDDDQDDEG 165
            AA++ +R+D+KTY+E IP A+ A F AF   FD+   A + +I+ LL+EDP ++++HT++VP+ VSY+ FW+RYFFR  KL Q   GGGR+     F   D+E DE+  W  D +DD+G
Sbjct:   54 AAVKLLRADLKTYTEPIPAAEQADFEAFLDGFDLMGEASSADISQLLEEDPTLSQVHTEVVPRVVSYEAFWTRYFFRLSKLQQ---GGGRTPIKLAFDDLDDE-DEDLTW--DVEDDQG 166          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: A0A7S3YEL0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEL0_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 8.080e-16
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 0
Query:   54 AALRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEK 131
            AAL+A+++D+ TY E I + +   F  F +  DV AKT+EI+ LLK +PVV ++ TQLVP  +SYD FW+RY+FR  +
Sbjct:   67 AALKALQNDINTYQEEISDQELMEFRMFEQRLDVSAKTKEISELLKSNPVVAQLQTQLVPDEISYDTFWTRYYFRVSR 144          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: A0A7S1C8K0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8K0_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.730e-10
Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   56 LRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQREVGGGRSFPRHDEEEDEEFAWGD 158
            L A++S   TY++GI  A+ A +  F   FD+ A   E   LL + PV+ ++H +LVP  V +D+FW+RYFFRA +L +    G  +  ++  E+D++  WGD
Sbjct:   24 LAALQSSADTYAKGIQAAERAAYADFLTSFDLAAAADERDALLADVPVMRRLHARLVPDQVVHDEFWTRYFFRAGRLKR---AGALAALQNTPEDDDDLGWGD 123          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: A0A061BCI3_CYBFA (CYFA0S36e00474g1_1 n=2 Tax=Cyberlindnera fabianii TaxID=36022 RepID=A0A061BCI3_CYBFA)

HSP 1 Score: 73.9 bits (180), Expect = 2.140e-10
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0
Query:   51 RASAALRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQREVGGGRSFPRHDEE---EDEEFAWGDD 159
            R  A L  + +  + YS    E+D  +F  F   F V +KT EI+TLLK  P + K+ T LVP  VSYD+FW+RYF+  EK+ Q+E    +   R  E    E E+ +WGDD
Sbjct:  202 RTEAQLHTLHTSPELYS--TTESDP-KFDNFKSTFSVESKTGEISTLLKNTPTLQKLSTDLVPAKVSYDEFWTRYFYMKEKILQQESTRKKLLGRAQEAVPTESEDLSWGDD 310          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: A0A6H5KP84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP84_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 5.950e-10
Identity = 97/254 (38.19%), Postives = 131/254 (51.57%), Query Frame = 0
Query:  235 AVASAEIARLTEAL-------ASMS----------GKAEKMTRERDAALAEAVQLKARVCQSEKDLEQAAARVAELIDAAAAARRDSDARLGKIQDALDASEARAAAAEKEAEESFASRKETMAAARVAAGSDGNENAVAMAAEAEA--------------AVKELSRLKKALREERSQHEEILLASSRQAANEAVEAALSSADADREEACAEATASMRAENERKAEELDALRAQLTKSAAAMEEIGTLKADVD 457
            A A AEI+RLT AL       AS S          GK +++TR+RDAA+AEA QL++ + Q + + ++   +    +DAA  A ++   +L + + A +   AR AAAEKE            AAAR AAG    + AVA                     +  ELSRLKKA REER++HE +L+AS RQAANEA                      M+AE ERK +EL+ALR QL KS  AMEE+  L+A+V+
Sbjct:  272 AAAMAEISRLTAALRASEAERASASAVEGSRGGDGGKVDEVTRQRDAAVAEADQLRSSLRQLQSEHQETVNKATADLDAAGDAEQELRRQLAEAEAAAEEGRARVAAAEKEVR--------AHAAARAAAGE--RKEAVAXXXXXXXXXXXXXXXXXXXXXSSAELSRLKKAFREERAEHEAMLVAS-RQAANEAXXXXXXXXXXXXXXXXXXXXXXMKAEVERKDQELEALRVQLAKSKGAMEEVSALRAEVE 514          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: A0A1G4J2N9_9SACH (LAME_0C05952g1_1 n=1 Tax=Lachancea meyersii CBS 8951 TaxID=1266667 RepID=A0A1G4J2N9_9SACH)

HSP 1 Score: 67.8 bits (164), Expect = 1.170e-8
Identity = 38/86 (44.19%), Postives = 45/86 (52.33%), Query Frame = 0
Query:   51 RASAALRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQRE 136
            R  A LR + SD   Y      A      A  + FDV A T EIA LLK D V+T+    LVP+HVSY DFW  YF R +K+   E
Sbjct:  146 RTEAELRLLSSDQSIYLNSTMNAKGEGDGAKAEAFDVDAHTTEIADLLKADSVLTQTMNALVPEHVSYGDFWDIYFTRRQKILDME 231          
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Match: I1M178_SOYBN (BSD domain-containing protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1M178_SOYBN)

HSP 1 Score: 68.2 bits (165), Expect = 2.250e-8
Identity = 46/120 (38.33%), Postives = 69/120 (57.50%), Query Frame = 0
Query:   51 RASAALRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKEDPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQREVGGGRSFPRH---DEEEDEEFAWGDDDQDDEGHD 167
            R    +RA++ D+ TY E  PE D   F+ +   F+V  K++EI  L++E+ VV +I+ ++VP  +  + FWSRYF+R +KL Q E    +   R    DEEED    W  DD D+ G+D
Sbjct:  171 RFDTLVRALQCDVNTYLEE-PE-DLGNFNEWKLGFEVNEKSEEIRNLIEENEVVDEIYEKVVPSRIDDESFWSRYFYRLDKLRQAEDTRAKLVKRAISGDEEED--LTWDFDDDDEGGND 286          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig905.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDU7_ECTSI9.680e-7038.51BSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JV15_9PHAE4.410e-3563.27BSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2WTQ6_9STRA6.800e-1945.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U4E8C6_9STRA3.770e-1646.22Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3YEL0_HETAK8.080e-1648.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1C8K0_9STRA1.730e-1037.86Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A061BCI3_CYBFA2.140e-1041.07CYFA0S36e00474g1_1 n=2 Tax=Cyberlindnera fabianii ... [more]
A0A6H5KP84_9PHAE5.950e-1038.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1G4J2N9_9SACH1.170e-844.19LAME_0C05952g1_1 n=1 Tax=Lachancea meyersii CBS 89... [more]
I1M178_SOYBN2.250e-838.33BSD domain-containing protein n=2 Tax=Glycine subg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 283..303
NoneNo IPR availableCOILSCoilCoilcoord: 241..275
NoneNo IPR availableCOILSCoilCoilcoord: 352..386
NoneNo IPR availableCOILSCoilCoilcoord: 477..504
NoneNo IPR availableCOILSCoilCoilcoord: 308..328
NoneNo IPR availableCOILSCoilCoilcoord: 418..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 516..625
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR16019:SF5BSD DOMAIN-CONTAINING PROTEIN 1coord: 31..381
NoneNo IPR availablePANTHERPTHR16019SYNAPSE-ASSOCIATED PROTEINcoord: 31..381
IPR005607BSD domainSMARTSM00751wurzfinal6coord: 81..133
e-value: 1.3E-10
score: 51.3
IPR005607BSD domainPFAMPF03909BSDcoord: 85..136
e-value: 1.2E-15
score: 57.2
IPR005607BSD domainPROSITEPS50858BSDcoord: 81..133
score: 15.618577
IPR035925BSD domain superfamilyGENE3D1.10.3970.10BSD domaincoord: 43..139
e-value: 1.8E-17
score: 65.3
IPR035925BSD domain superfamilySUPERFAMILY140383BSD domain-likecoord: 50..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig905contigA-nodosum_M_contig905:108206..123885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig905.6.2mRNA_A-nodosum_M_contig905.6.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig905 106987..123973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig905.6.2 ID=prot_A-nodosum_M_contig905.6.2|Name=mRNA_A-nodosum_M_contig905.6.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=626bp
MSLGEEGEEDYDSYYDSESDDYEEDYDEGPEGGGDGGDKWRDGKTSRGRQ
RASAALRAMRSDMKTYSEGIPEADAARFHAFTKCFDVGAKTQEIATLLKE
DPVVTKIHTQLVPQHVSYDDFWSRYFFRAEKLAQREVGGGRSFPRHDEEE
DEEFAWGDDDQDDEGHDRQNKTDAPTADAAPAGGALGAMDVAHQDAATTP
RRRHSEGSALLSVPGGPAGKDRSSEGEVAVATGDAVASAEIARLTEALAS
MSGKAEKMTRERDAALAEAVQLKARVCQSEKDLEQAAARVAELIDAAAAA
RRDSDARLGKIQDALDASEARAAAAEKEAEESFASRKETMAAARVAAGSD
GNENAVAMAAEAEAAVKELSRLKKALREERSQHEEILLASSRQAANEAVE
AALSSADADREEACAEATASMRAENERKAEELDALRAQLTKSAAAMEEIG
TLKADVDELRRAVEIERETAFKAAGEAKQEGEAAKQLREEVRALRAAADQ
ARAMVKGSAGGLMKRGTNRTDVAGEDTDGWGDDEYDSCCAASNSSGVVVD
RPPSLASPDADNGRGRPGNRQKDGVTAAALAGDDRSGGSDVGGRVAPGSA
RQAERTGRKEGGGEGEGDDGWEGWD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005607BSD_dom
IPR035925BSD_dom_sf