prot_A-nodosum_M_contig904.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig904.9.1
Unique Nameprot_A-nodosum_M_contig904.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length910
Homology
BLAST of mRNA_A-nodosum_M_contig904.9.1 vs. uniprot
Match: D8LEG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG7_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 9.490e-53
Identity = 244/781 (31.24%), Postives = 336/781 (43.02%), Query Frame = 0
Query:  233 HRANSLRSLGDLTLDWRRDPFSTPARRRRLINDVCKLVVSSYAEAAASRVAEFRREEAFVACIQAAVRMRSAWNRFKVEVAERRRRAALTLQLGWLAYTARRRTQILREKKDIARLEEEIARKKRLMRERDHEKVAISREKMEQKKRQSGQASVVL----LQRRFRA--------IQAREELAENKRTQDQQRAVRVSKAAATIHATF------------------RRWGRKQEASARILRDKMIKAAYLIQRAWSQYEEESLMKRPKPQR---------------SEHSDASGSKSFFINNV------ETDSHVSTPHDTRATAGDTCEPLTSEETCPPKSPTFTDLQASGTDARGSDDNC----LRPRNAAGL--NPASTR-----VAHAPPTGMMAVRVKIGSERRNWFTPVV-----SREID-QTAPLVPVGTGSAS-------------DADKNNNGRQRDGVMLSKTATTTGAEEVRVLGVQPSAEQGAKTARLKI--ETIFLASHTEASQ-TWPQDRVGDGSRCEMSRSSFLEVIPSNPSAAVRQTTETTKECLV-------GTLGGLGRET--STSRTREKPQVPARNAVAMNNTQEQCCIMEGSQVYRYLGCARCGLKYLVESVDARLPESGSEQPAPEVLYLCTTCGDILRGE-EDGRWQRRRRPSSAPAVGRR--SAPHDGDSSSKRTAKRCQILPDGSSVDH----VLEEGRSEITVAQESYEVGRSQRRS---TKIKLQYARCARTIQHAYKDFRHQQYLRDWALRVV 910
            HRANS RSL D+T DWR DPFSTPARRRRLINDVCK++V +Y  A+  RV   RREE +   IQAA RM  A   F  ++  RR  AAL LQLGWL+  ARRR ++LRE +D  R  E                                          LQRRFRA         QAR  L + +R +D+Q     +   AT                       +R  R + A  R+       A+  +Q+AW +Y+  + + R + +                +EH     S +   +N       + D ++S     +  +GD  E  +  +         + L A      G  DN     +RP  + G   +PA  R                V V+ GSE  +  TP+V       E+D +T     VGT  A+              +D++   R R   +  K      A+     G  P A   A  AR +    T   AS T AS+ T P +   +    + + +  +  I S  +  +     T    +V       GT    G     + S    +P   A   V +  T++    ME +QVY  LGC  CG+KYLVE+VD  + +S   QP PEVLYLCTTCG  LR   E+GRW+RRRRPSSAPA GRR  SA   G       A      P G+  +      L E  S +   Q++   G  +R+    +  +L+YA CA+ IQHAY++FRH+QYLRDWA  +V
Sbjct:   19 HRANSQRSLQDMTRDWRNDPFSTPARRRRLINDVCKVIVRTYTHASVLRVVGLRREERYATRIQAAFRMSWARRLFCAKLEARRVNAALVLQLGWLSCAARRRVRVLREARDHDRRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRFRARQELLVALTQARRRLTQAQRLRDEQHREATAMMQATXXXXXXXXXXXXXXXXXXXXXXXQRRARDKAAVERL-------ASARLQQAWRRYKAANELNRRRRRELETSGLRSSTTDEDATEHRTEGASSTSLCSNEGHPDPKDEDPNISKKSVRQEMSGDVNEGASGWDNWSSAFGVNSSLAAEIA-REGETDNAAAENVRPWTSTGAAESPAPPRSRXXXXXXXXXXXXXXVTVRRGSEETSLVTPIVLTESGGEEMDAETTRKSEVGTALATADVTVVTAFSSTLGSDESGGTRPRAATVADKAVRVAEAK-----GAAPPAHADAPKARREQPERTKLSASATAASEITKPANPAPNQDADDAAVAGKISQILSTTAPQIANEEATAVPAMVPVAPVMKGTAASEGDPPMMTVSTPMTEPAEEAARDVVVKPTEQ--LFMEDTQVY--LGCGMCGVKYLVEAVDPGVSKSTQGQPTPEVLYLCTTCGATLRNNGENGRWKRRRRPSSAPAAGRRRGSAFSVGGRDGGARANNEYGPPPGNGWNGDRAAALVESPSVVESLQQALHTGGGRRQGENDSATRLRYAHCAKAIQHAYQNFRHRQYLRDWAFSLV 782          
BLAST of mRNA_A-nodosum_M_contig904.9.1 vs. uniprot
Match: A0A6H5JBQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ7_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.130e-32
Identity = 220/769 (28.61%), Postives = 290/769 (37.71%), Query Frame = 0
Query:  244 LTLDWRRDPFSTPARRRRLINDVCKLVVSSYAEAAASRVAEFRREEAFVACIQAAVRMRSAWNRFKVEVAERRRRAALTLQLGWLAYTARRRTQILREKKDIARLEEEIARKKR----LMRERDHEKVAISREKMEQKKRQSGQASVVLLQRRFRAIQAREELAENKRTQDQQRAVRVSKAAATIHATFRRWGRKQEASARILRDKMIKAAYLIQRAWSQYEEESLMKRPKPQRSEHSDASGSKSFFINNVETDSHVSTPHDTRA----TAGDTCEPLTSEETCPPKSPTFTDLQ---------------ASGTD-----------------ARGSDDNC---LRPRNAAGL--NPASTRVAH-----APPTGMMAVRVKIGSERRNWFTPVVSREID------QTAPLVPVGTGSAS-------------DADKNNNGRQRDGVMLSKTATTTGAEEVRVLGVQPSAEQGAKTARLKI--ETIFLASHTEASQTW-PQDRVGDGSRCEMSRSSFLEVIPSN--PSAAVRQTTETTKECLVGTL--GGLGRETSTSRTREKPQV-PARNAVAMNNTQEQCCIMEGSQVYRYLGCARCGLKYLVESVDARLPESGSEQPAPEVLYLCTTCGDILRGE-EDGRWQRRRRPS----------SAPAVGRRSA-----------PHDGDSSSKRTAKRCQILPDGSSVDHVLEEGRSEITVAQESYEVGRSQRRS---TKIKLQYARCARTIQHAYKDFRHQQYLRDWALRVV 910
            ++ DWR DPFSTPARRRRLINDVCK++V +Y  A+  RV   RREE +   IQAA RM S    F  ++ E R  AA  LQLGWL++ A+RR ++LRE +D  R  EE  RK+R                               S V+LQRRFRA                                                                                              +ET    S+  D  A    T G +   L S E  P       D+                ASG D                   G  DN    +RP  + G   +PA +R  H      PP GMM V V+ GSE  +  TP+V  E        +T     +GT SA+              +D++   R R   +  KT     A+     G  P A      +R K    T   AS   AS+   P +        + + +  +  IPS   P  A  +    +    V  L  G    E     T   P   PA  A        +   ME +QVY  LGC  CG+KYLVE+VD  + +S   QP PEVLYLCTTCG  LR   EDGRW+R               SA +VG R             P +G +  + TA               L E  S +   Q++ + G  +R+    +  +L+YA CA+ IQHAY++FRH+QYLRDWA  + 
Sbjct:    1 MSRDWRNDPFSTPARRRRLINDVCKVIVRTYTHASVLRVVGLRREERYATRIQAAFRMISTRRLFCAKL-EARVSAASVLQLGWLSWAAQRRVRVLRETRDHDRRVEEGRRKRREDXXXXXXXXXXXXXXXXXXXXXXXXXXXLESAVVLQRRFRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXRRELETSGLPSSTTDEDAMEHRTEGASSRSLCSNEGHPDPKDEDPDISKKGVRQDMSGDVNKGASGWDNWSSAFGVNSSLAAEIAREGETDNAAENVRPWTSTGAAESPAPSRSRHHHPKDPPPAGMMTVTVRRGSEETSLVTPIVLTESGGEDMDAETTRESEIGTASATAGVSVVTADSSILGSDESGGTRPRAVAVADKTVRVAEAK-----GAAPPAHADTPKSRRKQAERTKTPASAIAASEVAKPANPAPKQDADDAAVAGKISQIPSTTAPQIANEEAKGVSAMVPVALLRKGTAASEGDPPMTVSTPMTEPAEEAARDVVEPTEQLFMEDTQVY--LGCGMCGVKYLVEAVDPGVSKSAQGQPTPEVLYLCTTCGATLRNNGEDGRWKRXXXXXXXXXXXXXXXSAFSVGGRDGGARANNEYGPPPGNGWNGDRATA---------------LVESPSVVESLQQALQTGGGKRQGENDSATRLRYAHCAKAIQHAYQNFRHRQYLRDWAFSLA 742          
BLAST of mRNA_A-nodosum_M_contig904.9.1 vs. uniprot
Match: A0A835ZEY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.530e-12
Identity = 59/141 (41.84%), Postives = 75/141 (53.19%), Query Frame = 0
Query:  206 LYDRDHVLGVKIRDIEFLTTSGKCSNM------HRANSLRSLGDLTLDWRRDPFSTPARRRRLINDVCKLVVSSYAEAAASRVAEFRREEAFVACIQAAVRMRSAWNRFKVEVAERRRRAALTLQLGWLAYTARRRTQILR 340
            LYDR HVL    R I F   SG  +        H   S  +L  +  DW  DP+STPARRRRLI++V +++V SY  AAA RVA FR E A    IQA  R R A   +   + ER+ +A + +QL W  + A R    LR
Sbjct:   31 LYDRRHVLAQTARSIVFRRGSGSAAATDATTAAHTRLSHVALEVVAKDWINDPYSTPARRRRLIHEVSRVIVFSYKRAAAERVAAFRVECAAATVIQAHARRRFAAVIYTAALHERQVQACVRVQLWWRRWRAWRVVAALR 171          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig904.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEG7_ECTSI9.490e-5331.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBQ7_9PHAE2.130e-3228.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEY7_9STRA4.530e-1241.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 338..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 803..838
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 16..82
e-value: 1.31791E-10
score: 56.4211
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 15..88
e-value: 2.3E-9
score: 47.1
IPR001478PDZ domainPFAMPF00595PDZcoord: 26..82
e-value: 5.6E-5
score: 23.4
IPR001478PDZ domainPROSITEPS50106PDZcoord: 4..87
score: 12.3453
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 7..102
e-value: 3.0E-12
score: 48.2
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 12..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig904contigA-nodosum_M_contig904:78216..81924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig904.9.1mRNA_A-nodosum_M_contig904.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig904 78216..81924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig904.9.1 ID=prot_A-nodosum_M_contig904.9.1|Name=mRNA_A-nodosum_M_contig904.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=910bp
WSAVVDIIVPAGGAAGIAFQWSMTPTPGLFVVDVAEGSLAARHGGIVPGM
LLLEIGGHRVIGMSQEEIMGLIRSASGKTHVLTLARKSQLPPTDRCSPRA
QAPSEDGFPQSARSDSVTKTLMAPPVPSETLLSISSSVSCAPLSSLSSLD
GETSLAATSSVGSSVHADLTSAPDRRISNTSHHHAPRWETTLALRFVGTR
DNIISLYDRDHVLGVKIRDIEFLTTSGKCSNMHRANSLRSLGDLTLDWRR
DPFSTPARRRRLINDVCKLVVSSYAEAAASRVAEFRREEAFVACIQAAVR
MRSAWNRFKVEVAERRRRAALTLQLGWLAYTARRRTQILREKKDIARLEE
EIARKKRLMRERDHEKVAISREKMEQKKRQSGQASVVLLQRRFRAIQARE
ELAENKRTQDQQRAVRVSKAAATIHATFRRWGRKQEASARILRDKMIKAA
YLIQRAWSQYEEESLMKRPKPQRSEHSDASGSKSFFINNVETDSHVSTPH
DTRATAGDTCEPLTSEETCPPKSPTFTDLQASGTDARGSDDNCLRPRNAA
GLNPASTRVAHAPPTGMMAVRVKIGSERRNWFTPVVSREIDQTAPLVPVG
TGSASDADKNNNGRQRDGVMLSKTATTTGAEEVRVLGVQPSAEQGAKTAR
LKIETIFLASHTEASQTWPQDRVGDGSRCEMSRSSFLEVIPSNPSAAVRQ
TTETTKECLVGTLGGLGRETSTSRTREKPQVPARNAVAMNNTQEQCCIME
GSQVYRYLGCARCGLKYLVESVDARLPESGSEQPAPEVLYLCTTCGDILR
GEEDGRWQRRRRPSSAPAVGRRSAPHDGDSSSKRTAKRCQILPDGSSVDH
VLEEGRSEITVAQESYEVGRSQRRSTKIKLQYARCARTIQHAYKDFRHQQ
YLRDWALRVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf