prot_A-nodosum_M_contig9.98.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9.98.1
Unique Nameprot_A-nodosum_M_contig9.98.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length217
Homology
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BLAST of mRNA_A-nodosum_M_contig9.98.1 vs. uniprot
Match: D7FJI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI4_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.160e-19
Identity = 61/163 (37.42%), Postives = 85/163 (52.15%), Query Frame = 0 
Query:   57 TSKQQLQRPRSYPFFSSLSDDVHGSPPARRFTPPLSPSLRSSNQQRTNDDESKGSAAASIAMLKRPGVPALTEITELKRMVGAAPRPWVLDFKIRGGRSHVNAKLREMEVMETDANARSPLKNIVPKFL---KRQNSHRTTQREVVEAREELMQVLTFLHLRE 216
            TS  Q +R +  P F              ++TPPLSP        + N +    +   +I +L+  G+P L ++  +++M GAA R W+ DF IRGGR  VN K+REM  +E +A    P   ++PK     K     R T REV E REELMQ++ FLHLRE
Sbjct:   51 TSTNQQKRLQRAPSFGGF-----------KWTPPLSP-----GNDKENAELKPTTPEQAIVLLRTRGLPPLADLKSIRQMAGAASRTWIRDFLIRGGRGCVNEKVREMAQLEMEARKHRPKLALLPKVFGSGKGDLPPRPTPREVSEVREELMQLVLFLHLRE 197
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.98.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJI4_ECTSI2.160e-1937.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9contigA-nodosum_M_contig9:1732557..1771241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9.98.1mRNA_A-nodosum_M_contig9.98.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9 1732149..1774455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9.98.1 ID=prot_A-nodosum_M_contig9.98.1|Name=mRNA_A-nodosum_M_contig9.98.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=217bp
MEGSVLAAGEKESSREAPSRKQLSRKPPRRRLLRRRSSNAVSEAPAMLQP
AACVPETSKQQLQRPRSYPFFSSLSDDVHGSPPARRFTPPLSPSLRSSNQ
QRTNDDESKGSAAASIAMLKRPGVPALTEITELKRMVGAAPRPWVLDFKI
RGGRSHVNAKLREMEVMETDANARSPLKNIVPKFLKRQNSHRTTQREVVE
AREELMQVLTFLHLRE*
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