prot_A-nodosum_M_contig9.32.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9.32.1
Unique Nameprot_A-nodosum_M_contig9.32.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length171
Homology
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BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 6.720e-24
Identity = 77/211 (36.49%), Postives = 97/211 (45.97%), Query Frame = 0 
Query:    1 MLAKFLGREIRFAFKCATDEGAWQFQLQRKHSLIHLAFVSYAADRILRRERIE-----------------SEQIYDRLGARMIPGTQHR------ELEDVTEGCTAYCEITGAPKIAFPLFCTTAD--SCGELRVEEDDERG--GNDVV--------------------RCLRALRELNGFVCGLARGDVLETQRSSN--GGTVAIPYELQ 162
            +LA FLG+E RFA KCATD+GAWQF  QR+H+L +LAF+SYA DRI+   R                   +  I   +GA    G++        E E    GC  YCE+TGAPK+ FPL    +   S  E   E DD R   G DV                       +RA R LN FV GLA+ D  +     N  GG    PY ++
Sbjct:  453 LLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSYAIDRIVAGSRHHXXXXXXXXXXXXXXXXGNNIIQQPVGAAGFGGSRRGVAGHVGEAEVTAGGCLTYCEVTGAPKLTFPLALLPSPEASVDERGREGDDTRSNVGGDVAGRGSGGGACPSSGVVAAEESAAVRAFRALNMFVSGLAKADANDNAVGKNRCGGGGIAPYTME 663
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BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.200e-16
Identity = 69/212 (32.55%), Postives = 87/212 (41.04%), Query Frame = 0 
Query:    2 LAKFLGREIRFAFKCATDEGAWQFQLQRKHSLIHLAFVSYAADRILRRERIESEQIYDRL------------------GARMIPGTQHRELEDVTE-------GCTAYCEITGAPKIAFPLFC-----TTADSCGELRVEEDDERGGNDVVR--------------------CLRALRELNGFVCGLARGDVLETQRSSN--GGTVAIPYEL 161
            LA FLG+E RFA KCATD+GAWQF  QR+H+L +LAF+S+A DRI+                                GA    G+       V E       GC  YCE+TGAPK+ FPL        +A + G    +     GG                          +RALR LN FV  LA+ D  +     N  GG    PY +
Sbjct:  466 LATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSHATDRIVLGSHXXXXXXXXXXXXXXXXXXXXXXXTQRPAGATGFAGSCKDVAGHVGEAESTAGGGCLTYCEVTGAPKLKFPLALLPSPEASAHAGGPAGHDSRGSVGGXXXXXXXXXXXXXXXXXXXXXXXSAAVRALRALNLFVAALAKADADDHAVGKNRCGGGGIAPYTI 677
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXA5_9PHAE6.720e-2436.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9E1_ECTSI1.200e-1632.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9contigA-nodosum_M_contig9:676334..677396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9.32.1mRNA_A-nodosum_M_contig9.32.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9 672226..677645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9.32.1 ID=prot_A-nodosum_M_contig9.32.1|Name=mRNA_A-nodosum_M_contig9.32.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=171bp
MLAKFLGREIRFAFKCATDEGAWQFQLQRKHSLIHLAFVSYAADRILRRE
RIESEQIYDRLGARMIPGTQHRELEDVTEGCTAYCEITGAPKIAFPLFCT
TADSCGELRVEEDDERGGNDVVRCLRALRELNGFVCGLARGDVLETQRSS
NGGTVAIPYELQPVLSSVPR*
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