mRNA_A-nodosum_M_contig894.9.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig894.9.1
Unique NamemRNA_A-nodosum_M_contig894.9.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: D7G7W4_ECTSI (Aldo/keto reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W4_ECTSI)

HSP 1 Score: 814 bits (2103), Expect = 2.810e-294
Identity = 376/506 (74.31%), Postives = 438/506 (86.56%), Query Frame = 1
Query:    1 QVFRQMRAEYFRLSALGHKDADLVAKLKEAYHKMVDRTDPLHRHRGDRVPEKWDCPKVRFGKTELMMPIITCGGMRQQFTWKPQSTVT-NDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATLEANMAKYKPELSDQENMDAWISFMPGFPYRPGIDMEPHIPDTCPNKTKVLDVLKEAHEWLCKENEVEVRKTLEERGWLAAYDLQPDIPFAERS 1515
            ++FRQMRAEYFRLS  G  DA+L+ KL+E+Y  MV+RTDPL +HRGD+V +KWDCPKVRFGKTEL MPIITCGGMRQQ TWKPQ T T N DI KEC+ NFQAIVDR+LELGINHFETAQ YGTSEIQFG+A KKHDRSS+ILQ+K   KED  AFR+GLELSF+KLQVEY+DIFS HGI++++QLDWTL+EGGCMEV+EEFRA GKIR++GFSTH HA +IKA I+S KFDC+NIHY F GSYHASGTN+ +G S+GN++NVELAHSLDMGVFCISP+DKGGM+YKPSK++ADACAE GITPIEFHSLWQW   PIAHTFTVG +RPSD DE VAAA +  RA ELV  V+K L   MVE LG EW+S WWH LPG YDTPTGVFVPH+VW+WNVV AWGMYDFARARYATLE+N+ K+KPEL+D+EN++A+  F PG+PYRP IDME HIPD+CPNK KVL++LKE HEWLCKENE EVR+TLE+RGWL A+DLQP++PF ER+
Sbjct:   22 KIFRQMRAEYFRLSEKGLGDAELLGKLRESYQVMVNRTDPLQKHRGDKVAKKWDCPKVRFGKTELKMPIITCGGMRQQLTWKPQETTTSNTDIPKECEDNFQAIVDRALELGINHFETAQMYGTSEIQFGQALKKHDRSSFILQSKAAAKEDVAAFRKGLELSFEKLQVEYMDIFSFHGINSLEQLDWTLREGGCMEVVEEFRAKGKIRWVGFSTHAHADVIKATISSKKFDCMNIHYHFVGSYHASGTNQTEGESDGNRENVELAHSLDMGVFCISPSDKGGMMYKPSKVLADACAESGITPIEFHSLWQWTQQPIAHTFTVGVARPSDFDEHVAAASMFHRADELVLPVQKALRGLMVEKLGAEWMSNWWHGLPGCYDTPTGVFVPHIVWMWNVVTAWGMYDFARARYATLESNLKKHKPELTDEENVNAFNRFTPGYPYRPDIDMEEHIPDSCPNKAKVLEILKEIHEWLCKENEAEVRQTLEQRGWLPAFDLQPNVPFPERN 527          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: A0A835ZFP1_9STRA (Aldo/keto reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP1_9STRA)

HSP 1 Score: 535 bits (1379), Expect = 2.620e-184
Identity = 269/521 (51.63%), Postives = 345/521 (66.22%), Query Frame = 1
Query:    1 QVFRQMRAEYFRLSALGHKDADLVAKLKEAYHKMVDRT----DPLHRHRGDRVPEKWDCPKVRFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGT-----NKDKGGS----NGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHS---PIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATLEANMAKYKPELSDQENMDAWISFMPGFPYRPGIDMEPHIPDTCPNKTKVLDVLKEAHEWLCKENEVEVRKTLEERGWLAAYDLQPDIPFAERS 1515
            QVFRQ+RAEY+RL+  G     LV ++++AY   V  T             R    W CP VRFG+T L MP+ITCGGMRQQ TW+P++  T  DI +E  KNF+AIVDR++ LGINHFETA GYGTS++QFG   KK+ R S+ILQTK  PK D   FR  LE SF +LQVEYLD+F+ HGI+  + L+WTL+ GGCME++EE+R AGKIR++GFSTH H  +I     + +FD +N+HY F GSY ASGT      + +GGS    +GN   +  A   DMGVF ISPNDKGG L+KPS+++ DAC   GITP+  ++LW W H       HT  VGA+RPSD DE VAAAK L RA EL+P +E  L   M++ LGQEWV +WW  LPGAYDTPTGVFVPH+VWL N+VKAWGM+DFARARY  LE N   +K + +++ N+ +  S++PG P  P             +K ++L+VL EAHEWL    E  +   LEE GWL++Y LQP  P+ E++
Sbjct:    7 QVFRQLRAEYYRLADAGIAGDALVTQMQQAYADFVAATVAPXXXXXXXXXXRTEGAWRCPTVRFGRTGLDMPVITCGGMRQQLTWRPEAGTTLADIPEENQKNFEAIVDRAMALGINHFETAVGYGTSQLQFGPCLKKYGRDSFILQTKIGPKADAAEFRAVLENSFTQLQVEYLDLFAFHGINKPEMLEWTLRPGGCMEIVEEYRRAGKIRWVGFSTHAHTDLIVKCCETGRFDYVNLHYHFVGSYTASGTWQGPLAEPRGGSMMAPSGNHAALLAAAKQDMGVFIISPNDKGGHLWKPSRVLVDACRPHGITPVALNALWLWSHQRSEAAVHTLVVGAARPSDFDEMVAAAKALPRAQELLPPIEAHLRKLMLDALGQEWVDSWWQGLPGAYDTPTGVFVPHIVWLHNLVKAWGMWDFARARYKGLEGNAKNWKADATEEANLASMNSYVPGMPAAPXXXXXXXXXXXX-HKARILEVLAEAHEWLSDAGEAVITPQLEECGWLSSYSLQPQWPWPEKA 526          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: A0A7S3XR36_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR36_HETAK)

HSP 1 Score: 396 bits (1018), Expect = 9.520e-130
Identity = 215/452 (47.57%), Postives = 281/452 (62.17%), Query Frame = 1
Query:  166 PKVRFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFK-KLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPT-GVFVPHVVWLWNVVKAWGMYDFARARYATLEANMAKYKPELSDQENMDAWIS--FMPGFPYRPGIDMEPHIPDTC---PNKTKVLDVLKEAHEWLCKENEVEVRKTLEERGWLAAYDLQPDIP 1500
            P VRFG+TEL MPI+T G MR Q TW+  +T++  D+   C  N  AI+ R+ ELG+ H ETA+ YG+SE+Q GRA KK  R +YILQTK +P +D  AFR  L+ S   KLQVE +D+ S+HG++  +QL+   + GGC++VLEE+R AG+I  IGFSTHG   +I  AI + +FD +N+HY F GSY ASG     GG  GN+  V  A + DMGVF ISP DKGG LYKPS   + AC     TP+ F +LW W   P  HT  VG +RP DLDE  AAA L DR  E+   V   L    VE LG+EW+ TWW  LPG Y+  T G+ V  +VW WN+++A+GMYDF R R+AT E   A + P  + Q N DA  S  FMPG  +   +  +  + D     P+  KVL++L +  +WLCKE+    ++    RGW AAYDLQ D+P
Sbjct:   27 PTVRFGRTELQMPILTLGCMRFQQTWQEWNTMSLGDVDAACQANLDAILSRAFELGVRHVETARMYGSSELQLGRALKKFPRDAYILQTKIIPMDDMAAFRATLDASLNDKLQVERVDLLSLHGVNTHRQLEMATRPGGCLDVLEEYRRAGRIGHIGFSTHGMTDVILDAINTGRFDYVNLHYHFLGSYTASGG--PHGG--GNRAAVAAAQAHDMGVFIISPADKGGKLYKPSLKFSAACLP-DATPLAFGNLWLWAQDPPCHTAVVGVARPEDLDEHYAAAMLYDRRKEISDRVAARLQKMAVEALGKEWLDTWWQGLPGPYEENTKGIAVGQMVWYWNLLQAYGMYDFCRDRFATHENVAASWDPAKTFQANCDALYSLHFMPGNAWTGDLP-QAALADALRGSPHADKVLEILCQVRDWLCKESIESQKEWRAARGWAAAYDLQADLP 472          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: A0A4D9CQ75_9STRA (Aldo_ket_red domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ75_9STRA)

HSP 1 Score: 367 bits (941), Expect = 3.320e-119
Identity = 194/457 (42.45%), Postives = 271/457 (59.30%), Query Frame = 1
Query:  199 MPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKK--HDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWK------HSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHE------LVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATLEANMAKYKPE--LSDQENMDAWISFMPGFPYRPGIDME--PHIPDTCPNKTKVLDVLKEAHEWLCKENEVEVRKTLEER-GWLAAYDLQPDIPFAER 1512
            MPII+ GGMR Q TWKP    +  D+  EC  NF+AI++R+L+LGINH ETA+GYG+SE+Q+G A +K    R SYILQTK  P  D   FR  L+ S   L   +LD+F  HGI+  + L+W ++ GGC+EV++E++  G+IRF+GFSTH   P+I  AI +  FD +N+HY   GSY +SGT++      GN + +E AH  DMGVF IS  DKGGMLY+P K++   C+   + P+ ++ LW W+       +P  HT  +GA+RPSD DE V A  LLD          L+   EK ++    E  G++W   WW  LP  Y    GV V  +VW+W + KA+G++ ++  +Y+ LE  +  +K +  LS QE M     + PG PY P    E  P +P   P + ++L +L+EA  W  KE        L+E+ GW  AY+LQPDIPF ER
Sbjct:    1 MPIISLGGMRLQQTWKPPDGFSQADVYPECQANFEAILERALKLGINHIETAKGYGSSELQYGEALRKLTTPRESYILQTKVRPMPDKDDFRRTLDRSLSLLGT-HLDLFGFHGINRPEHLEWVVQPGGCLEVVQEYQEEGRIRFVGFSTHAPTPLIVKAIDTGIFDYVNLHYHAIGSYTSSGTSESPSAGPGNWEAIEAAHRHDMGVFIISAADKGGMLYRPPKVLVGLCSP--LPPLIYNMLWLWRLPIGPSGAPAVHTLVIGAARPSDFDEAVRATNLLDEIERGGSEAALMETAEKRMSQASREVWGEDWADDWWLGLPDCYQNLCGVHVAQIVWMWAITKAYGLHRYSCTQYSKLEDQVPAWKEKGHLSVQERMATVFDWTPGLPYDPSEQEELAPFLP--APRRERLLCILREASSWFGKETSGNRGVGLQEQEGWTDAYNLQPDIPFPER 452          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: A0A252DLT5_9NOSO (Aldo/keto reductase n=4 Tax=Nostocales TaxID=1161 RepID=A0A252DLT5_9NOSO)

HSP 1 Score: 310 bits (795), Expect = 4.090e-98
Identity = 153/354 (43.22%), Postives = 229/354 (64.69%), Query Frame = 1
Query:  175 RFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATL 1236
            RFG+TEL M + +CGGMR QF W+    V+  +I+K+  +N +A + R++ELGINH ETA+GYGTSE+Q GR   K  R   I+QTK  P  D + FRE  E S K LQ++Y+D+  +HGI++ + LD++++ GGC+EV ++ +A GK+RFIGFSTHG A +I  AI +N+FD +N+H+ +   ++ +               ++ A S DMGVF ISP+DKGGMLYKP + + + CA   ++P+ F+ L+   H P  HT ++GA++P D DE +    LLD+A E++P +   L S  + TLG++WV TW  +LP   +TP  V +  ++WLWN+  A+ M D+A+ RY  L
Sbjct:    5 RFGRTELQMSVFSCGGMRYQFKWQD---VSPREIAKDNQENLEATIQRAIELGINHIETARGYGTSEMQLGRILPKFPREKLIVQTKVGPVADAQEFRETFERSLKYLQLDYVDLLGLHGINHDESLDYSIRPGGCLEVAQQLQAEGKVRFIGFSTHGSADLIVQAINTNQFDYVNLHWYYINQWNWAA--------------IKAATSHDMGVFIISPSDKGGMLYKPPQKLVNLCAP--LSPMVFNDLFCLSH-PQVHTLSLGAAKPQDFDEHLKTLDLLDQAAEILPPILARLESEAIATLGEDWVKTWQVNLPSFAETPNQVNMRVILWLWNLAIAYDMIDYAKMRYNLL 338          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: A0A2P8WK52_9CYAN (Aldo/keto reductase n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WK52_9CYAN)

HSP 1 Score: 309 bits (792), Expect = 1.150e-97
Identity = 154/371 (41.51%), Postives = 235/371 (63.34%), Query Frame = 1
Query:  175 RFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDN---VELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATLEANMAKYKPELSDQ 1278
            RFG+TEL MP+ +CGGMR Q +WK    V    I ++  +N QAI+ R+LE+GINH ETA+GYGTSE+Q G+   +  R   I+QTK  P+ +P+AFR+ LE S   L+++Y+D+  +HGI+ ++ LD T+  GGC+EV+ EF+  G++R +GFSTHG    I+AAIA+++FD +N+H+ +                  N+DN   + LA   DMGVF ISP+DKGG LY P + + D C    ++P+ F+ L+   H P  HT +VGASRP+D DE +    L+DRA+E++P + + L    +  LG++W+ TW   LP   +TP  V +P ++WL+N+++A+ M ++A ARY+ L      +  + +DQ
Sbjct:    5 RFGRTELQMPVFSCGGMRYQHSWKD---VPERQIPRKNQENIQAIIHRALEVGINHIETARGYGTSEVQLGKVLPQLTRDELIVQTKVSPQANPQAFRQTLEQSLSNLRLDYIDLLGIHGINTLELLDQTVGPGGCIEVVREFQRQGRVRHVGFSTHGPTSTIEAAIATDQFDYVNLHWYYI-----------------NQDNWSAIHLARQHDMGVFIISPSDKGGHLYNPPQKLVDLCDP--LSPMVFNDLFCLSH-PEVHTLSVGASRPTDFDEHLKTLPLIDRANEILPPILQRLEQAAIAALGEDWLRTWRVGLPAPEETPQQVNIPAILWLYNLLEAFDMQEYAEARYSLLGNGGHWFPGQKADQ 352          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: UPI00168BCAFD (Aldo/keto reductase n=5 Tax=Nostocales TaxID=1161 RepID=UPI00168BCAFD)

HSP 1 Score: 308 bits (788), Expect = 4.580e-97
Identity = 153/363 (42.15%), Postives = 227/363 (62.53%), Query Frame = 1
Query:  175 RFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATLEANMAKYKP 1263
            RFG+TEL MP+ +CGGMR QF W+    V   DI  +  KN +A + R++ELGINH ETA+GYG+SE+Q G+   K  R   I+QTK  P  D K FR+  E S + LQ++Y+D+FS+HGI+N + LD+ ++ GGC++V  + +A GK+RFIGFSTHG   +I  AI +N+FD +N+H+ +   +              N   +  A  LDMGVF ISP+DKGG LYKP + + + CA   ++P+ F+ L+   HS + HT ++GA++P D DE +    LLD + E++P +   L    + TLG++WV TW  +LP    TP G+ +P ++WLWN+  A+ + D+A+ RY  L  N + + P
Sbjct:    5 RFGRTELQMPVFSCGGMRYQFKWQD---VAWPDIPSDNQKNLEATIHRAIELGINHIETARGYGSSEMQLGKILPKFPREQLIVQTKVSPVADAKEFRKTFEKSLQYLQLDYVDLFSLHGINNTELLDYGIRPGGCLDVARQLQAEGKVRFIGFSTHGATDLIVQAINTNQFDYVNLHWYYINQW--------------NWPAILAATRLDMGVFIISPSDKGGKLYKPPQKLVNLCAP--LSPMVFNDLFCLSHSQV-HTLSLGAAKPQDFDEHLKTLALLDESCEILPPILARLEEEAIATLGEDWVKTWHLNLPTWEHTPGGINIPMILWLWNLAHAYDLIDYAKTRY-NLMGNASHWFP 346          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: K8GGN4_9CYAN (Putative oxidoreductase of aldo/keto reductase family n=2 Tax=Leptolyngbyaceae cyanobacterium JSC-12 TaxID=864702 RepID=K8GGN4_9CYAN)

HSP 1 Score: 307 bits (786), Expect = 9.130e-97
Identity = 160/411 (38.93%), Postives = 239/411 (58.15%), Query Frame = 1
Query:  175 RFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATLEANMAKYKPELSDQENMDAWISFMPGFPYRPGIDMEPHIPDTCPNKTKVLDVLKEAH 1407
            RFG+T L MP+ +CGGMR Q+ W+  S     DI  +   N +A + RSLE+GINH ETA+GYG+SE+Q G+   K  R S+I QTK VP  DP  FR+ LE S   L+++Y+D+  +HGI+  + L+WT++ GGC+E+  +F+  G+IRF+GFSTHG   +I     +++FD +N+H+ +                  N + +  A   DMGVF ISP+DKGGMLY P + + + CA   ++P+ F++L+   HS + HT ++GA+RP DLDE +   + LDRA E++P +   L    +E LG++W  TW   LP   +TP    +  V+WLWN+  A+ M D+AR RYA L      +     DQ +++A          +P +   PH         K+L +LK+AH
Sbjct:    5 RFGRTNLQMPVFSCGGMRYQYKWQDVSLA---DIPADNQTNLEATIRRSLEVGINHIETARGYGSSEMQLGQILPKIPRESFIFQTKVVPTADPNEFRDKLEKSLAYLRLDYVDLLGIHGINTDETLEWTVRPGGCLEIARQFQQQGRIRFVGFSTHGPTDVIVRTCKTDQFDYVNLHWYYINQR--------------NWEAIAAATQHDMGVFIISPSDKGGMLYNPPQRLVELCAP--LSPMVFNNLFCLSHSQV-HTLSIGAARPQDLDEHLKTLEYLDRADEVLPPILHRLEQAAIERLGEDWYKTWHVGLPSIEETPGRFNILTVLWLWNLAIAYDMVDYARMRYALLGNGGHWFPGAKVDQVDLNA---------IKPCLQHSPHA-------DKILTILKDAH 379          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: A0A1Z4GY49_9CYAN (Aldo/keto reductase n=1 Tax=Calothrix sp. NIES-2100 TaxID=1954172 RepID=A0A1Z4GY49_9CYAN)

HSP 1 Score: 305 bits (780), Expect = 7.240e-96
Identity = 162/415 (39.04%), Postives = 243/415 (58.55%), Query Frame = 1
Query:  175 RFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATLEANMAKYKPELSDQ-ENMDAWISFMPGFPYRPGIDMEPHIPDTCPNKTKVLDVLKEAHEWL 1416
            RFG+TEL MP+ +CGGMR QF W+    V+  +I ++  +N +A + R++ELGINH ETA+GYGTSE+Q GR   K  R   I+QTK VP  DP+ FRE  E S   LQ++Y+D+  +HGI+N + ++ +++ GGC+EV ++ +A GK+RFIGFSTHG    I  AI +N FD +N+H+ +   ++ +               +  A   DMGVF ISP+DKGGMLYKP   +   CA   ++P+ F+ L+   H P  HT ++GA++P + DE +   +LLDR+ E++P +   L    + TLG++WV TW  +LP    TP  V +P ++WLWN+  A+ M D+A+ RY  L      +    +D+ E +D           RP +   PH         K+  +L +AH+ L
Sbjct:    5 RFGRTELQMPLFSCGGMRYQFQWQD---VSPGEIPQDNQENLEATIRRAIELGINHIETARGYGTSEMQLGRILPKFKREELIVQTKVVPVADPQEFRETFERSLNYLQLDYVDLLGIHGINNDESMNHSIRTGGCVEVAQQLQAEGKVRFIGFSTHGATNTIVQAINTNLFDYVNLHWYYINQWNWAA--------------IAAATQHDMGVFIISPSDKGGMLYKPPAKLVHLCAP--LSPMVFNDLFCLSH-PQVHTLSLGAAKPQNFDEHIKTLELLDRSDEILPPILARLEQEAIATLGEDWVKTWRVNLPTFEQTPGEVNIPVILWLWNLAIAYDMVDYAKMRYNLLGNASHWFPGNKADRLEELDL----------RPCLVNSPHA-------NKIPQILTQAHQLL 382          
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Match: Q8DL89_THEVB (Tll0607 protein n=2 Tax=Thermosynechococcus vestitus TaxID=146786 RepID=Q8DL89_THEVB)

HSP 1 Score: 305 bits (780), Expect = 1.300e-95
Identity = 154/354 (43.50%), Postives = 224/354 (63.28%), Query Frame = 1
Query:  175 RFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVDRSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAFREGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAGKIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGSNGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEFHSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILNSRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFARARYATL 1236
            RFG+TEL MP+ +CGGMR QF+W+  +  T   I  E  +N +A + R+L LGI H ETA+GYGTSEIQ G+   +  R   I+QTK  P+   K FRE LE S + LQ++Y+D+ ++HG++  + L+  L+ GGC++V  E++A+GKIRFIGFSTHG   +I+ AIAS+ FD +N+H+ +                  N   +  A + DMGVF ISP DKGGMLYKP + + + CA   ++P+ F+ L+   H P  HT ++GA+RPSD DE + A +LLD+A E++P +   L    ++ LG++W  TW   LP    TP  V +P ++WLWN+V+A+ + D+AR RY  L
Sbjct:   24 RFGRTELPMPVFSCGGMRYQFSWQDVNPST---IPAENQRNLEATIRRALALGITHIETARGYGTSEIQLGKILPRLPREKLIVQTKVGPRPTAKEFRETLETSLRNLQLDYIDLLAIHGLNLPEHLEQVLRPGGCLDVAREWQASGKIRFIGFSTHGSLEVIRQAIASDVFDYVNLHWYYINQQ--------------NWPAILDAQARDMGVFIISPADKGGMLYKPPQRLVELCAP--LSPMVFNDLFCLSH-PQVHTLSIGAARPSDFDEHLKALELLDQAGEILPPILARLEQAAIDRLGEDWYHTWHEGLPDYRHTPGEVNIPVILWLWNLVQAYDLLDYARMRYNLL 357          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig894.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7W4_ECTSI2.810e-29474.31Aldo/keto reductase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835ZFP1_9STRA2.620e-18451.63Aldo/keto reductase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S3XR36_HETAK9.520e-13047.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CQ75_9STRA3.320e-11942.45Aldo_ket_red domain-containing protein n=2 Tax=Mon... [more]
A0A252DLT5_9NOSO4.090e-9843.22Aldo/keto reductase n=4 Tax=Nostocales TaxID=1161 ... [more]
A0A2P8WK52_9CYAN1.150e-9741.51Aldo/keto reductase n=1 Tax=filamentous cyanobacte... [more]
UPI00168BCAFD4.580e-9742.15Aldo/keto reductase n=5 Tax=Nostocales TaxID=1161 ... [more]
K8GGN4_9CYAN9.130e-9738.93Putative oxidoreductase of aldo/keto reductase fam... [more]
A0A1Z4GY49_9CYAN7.240e-9639.04Aldo/keto reductase n=1 Tax=Calothrix sp. NIES-210... [more]
Q8DL89_THEVB1.300e-9543.50Tll0607 protein n=2 Tax=Thermosynechococcus vestit... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig894contigA-nodosum_M_contig894:191693..197663 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7W4
PFAMsAldo_ket_red
Model size1518
Max annot lvl2759|Eukaryota
KEGG rclassRC00066,RC00161
KEGG koko:K00064
KEGG ReactionR07675,R08926
KEGG Pathwayko00051,ko00053,ko01100,ko01110,ko01120,map00051,map00053,map01100,map01110,map01120
KEGG ModuleM00114
Hectar predicted targeting categoryother localisation
Exons10
Evalue1.2e-291
EggNOG OGsCOG0667@1|root,KOG1576@2759|Eukaryota
EC1.1.1.122
DescriptionD-arabinose 1-dehydrogenase (NAD) activity
Cds size1503
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig894.9.1prot_A-nodosum_M_contig894.9.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig894 191708..197663 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870321.3013415-UTR-A-nodosum_M_contig894:191692..1917071680870321.3013415-UTR-A-nodosum_M_contig894:191692..191707Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig894 191693..191707 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870321.5164568-CDS-A-nodosum_M_contig894:191707..1918631680870321.5164568-CDS-A-nodosum_M_contig894:191707..191863Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 191708..191863 +
1680870321.5361137-CDS-A-nodosum_M_contig894:192106..1922521680870321.5361137-CDS-A-nodosum_M_contig894:192106..192252Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 192107..192252 +
1680870321.5482605-CDS-A-nodosum_M_contig894:193240..1932801680870321.5482605-CDS-A-nodosum_M_contig894:193240..193280Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 193241..193280 +
1680870321.5605733-CDS-A-nodosum_M_contig894:193754..1938981680870321.5605733-CDS-A-nodosum_M_contig894:193754..193898Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 193755..193898 +
1680870321.573135-CDS-A-nodosum_M_contig894:194270..1944831680870321.573135-CDS-A-nodosum_M_contig894:194270..194483Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 194271..194483 +
1680870321.5856426-CDS-A-nodosum_M_contig894:194823..1949761680870321.5856426-CDS-A-nodosum_M_contig894:194823..194976Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 194824..194976 +
1680870321.6009316-CDS-A-nodosum_M_contig894:195186..1954661680870321.6009316-CDS-A-nodosum_M_contig894:195186..195466Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 195187..195466 +
1680870321.611875-CDS-A-nodosum_M_contig894:195960..1960361680870321.611875-CDS-A-nodosum_M_contig894:195960..196036Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 195961..196036 +
1680870321.6225815-CDS-A-nodosum_M_contig894:197053..1972101680870321.6225815-CDS-A-nodosum_M_contig894:197053..197210Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 197054..197210 +
1680870321.636897-CDS-A-nodosum_M_contig894:197525..1976631680870321.636897-CDS-A-nodosum_M_contig894:197525..197663Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 197526..197663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig894.9.1

>prot_A-nodosum_M_contig894.9.1 ID=prot_A-nodosum_M_contig894.9.1|Name=mRNA_A-nodosum_M_contig894.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=501bp
MRAEYFRLSALGHKDADLVAKLKEAYHKMVDRTDPLHRHRGDRVPEKWDC
PKVRFGKTELMMPIITCGGMRQQFTWKPQSTVTNDDISKECDKNFQAIVD
RSLELGINHFETAQGYGTSEIQFGRAFKKHDRSSYILQTKGVPKEDPKAF
REGLELSFKKLQVEYLDIFSVHGISNMQQLDWTLKEGGCMEVLEEFRAAG
KIRFIGFSTHGHAPMIKAAIASNKFDCINIHYQFFGSYHASGTNKDKGGS
NGNKDNVELAHSLDMGVFCISPNDKGGMLYKPSKIVADACAEVGITPIEF
HSLWQWKHSPIAHTFTVGASRPSDLDEPVAAAKLLDRAHELVPAVEKILN
SRMVETLGQEWVSTWWHDLPGAYDTPTGVFVPHVVWLWNVVKAWGMYDFA
RARYATLEANMAKYKPELSDQENMDAWISFMPGFPYRPGIDMEPHIPDTC
PNKTKVLDVLKEAHEWLCKENEVEVRKTLEERGWLAAYDLQPDIPFAERS
*
back to top

mRNA from alignment at A-nodosum_M_contig894:191693..197663+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig894.9.1 ID=mRNA_A-nodosum_M_contig894.9.1|Name=mRNA_A-nodosum_M_contig894.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5971bp|location=Sequence derived from alignment at A-nodosum_M_contig894:191693..197663+ (Ascophyllum nodosum dioecious)
CAGGTTTTCCGCCAGATGAGAGCCGAGTATTTCCGGTTATCTGCCCTTGG CCACAAGGATGCCGATCTGGTGGCCAAGCTCAAGGAAGCCTATCACAAGA TGGTCGATCGTACCGATCCCTTGCACAGGCATCGTGGGGACAGGGTTCCA GAGAAATGGGACTGCCCAAAGGTAAGCGATCGTGGGAGTACACTTGAGTC AACCTCATGTGTTTTATTTAAGCGTCTGATTCTGGGGCACTGTATGCTAG CTCCCTTAAGTGGCGAGCCCTCCGTCTTGTGTGCCTGGCAATTCTCACCT CGGGGCTATGGTAGGTCGATAAAGAAAATTGTATTGGAGGAAAGCTAGAG TACGTTGTTTAGTCAACCAGTCAATGCCTCCAACGCAGCGGCCGTTGAAC GTTCTCCAACCCAGGTAAGGTTCGGAAAGACCGAGCTGATGATGCCGATC ATCACGTGCGGAGGCATGCGGCAGCAGTTCACGTGGAAACCTCAGTCGAC GGTGACGAACGATGACATCAGCAAAGAATGTGACAAGAACTTCCAAGCCA TCGTGGACAGGTCCGCCCCGAGACAGCAGGCAACGTTTTGCAGTCAATTT CTAGGAGGGATCTTGAGCGCAATTAAGCAGTACATTATAGGGTCAGACTC CTGAAACAGCCCTATTAGTCTTTAATAGTAATAGTATCGGTACGGTTAAT ATTAATAGTATCTCCTGTTTATAAGCTGGGGCGGTTATCCCTCGAAGTCG TCGATAATACTGTACATACGTGTAATGCCTTACTTCATGATCATGATCCA CCGCGTTTTTCCTCTCACAGGAAAGTTTCGGTTGACGCTCAGCGCTTGAC ATGGAGTTGTGTTTTTTTCTTTTATCTCAGTTACGGCCGATGGGCCTCAA CGTGCTAGGTTACCAATCCCGCCTACTGCAACGTTGCCATCCTGTTAATG CCTGTGGTCACAAAGGATCTTCCCATCTCTCCCTGGTTCTCGCCTTATGA TTTTTTTAGCGATGCAAGTTCAGCACTCTTCCAACTTGTCAACTTATGGT TGAATTTTACTTACTCACGTTTTCTCACGCTTTCCGCTACCAAAGTCAGA ATACAAATAATTTTCACAAGAGTCGAACTCACGACTTCCGCATTAGTAGG TGTATGTTGTTACCTACTAGACCATTCGGGCGACGAGGGTTCATAGAAAA GACAGGAAAGCAGTACATTATAGAAAGGACGTCTACCTATTCGGCAAACG TTTCTCTATGTTTCTGTTTTAGTCGTCAGTGCCTTGGTGCTTTACTGGCT ATACCCAGAAGTTGACATTGCCTGACTTCTCGCAATTTTAGAAGTGATAT ATGAACATTGCTTTAATTCAGTTTATACATAATCGTTTATTTATATGCAG ATAAGTAGGGTACATCTATACGGATGATGTAATCTATAGTAAGTGGGATC TGCGCCATCGCCTGTCGTGTGCGCCCCCGAAAGTCCTCTAAGAACTTGAT TTTTGCGATCTCTGTGATTGCTGCATGTCCGCCCTCTCTGATGCGAAGGT CCCTGGAGCTGGGGATCAACCACTTTGAGACCGCCCAGGTGCGAGGAGTT TTGTGTTTCCTAATTACGAATATAACTTTGATACTGTACATTTAAGAGTG GATTGTGTAATGACCGCGAAATGGACTTGGCTTCGCATTGAATGTCATTA CCACCCCTACAGCAGTTATGTGGTGCCCGATATTATCGCATTTTTGTTGG GGCGATCGATGTCTATTAATAGTTAATAGCACTTGAGGCTGTTGTTTTTC CAGGACTATTAATAGCACTATAGACTATAGCCTCACCCGCCCTTGTTTTT CGAAGGAATATAGCTATAGAGTATAGCATATTACTGTCTCAACTGCACGA TACTATTTGAACCCCATGATTCTTCACGTTTCGAAGAATTGTGCAGCAAG GTTACGGCCCCTTGTCGAAGTTGCCGAGTCCCAGTTCAATCTGTCTGATA TTCGTAAAACCTTAACCCTAACCCTAGTTCACGACCATGCGTCCTTACTT GTGGTGATATAGGGGTACGGGACCAGCGAGATCCAGTTCGGGCGAGCGTT CAAGAAGCACGACAGATCGTCGTACATCCTGCAAACTAAGGGTGTCCCAA AGGAAGACCCCAAAGCTTTCCGCGAGGGTCTAGAACTGAGCTTCAAGAAG CTGCAAGTAAGAACGCGTGTGCTCACACGCTCATCGTCAATAGAAGTATA GAAAAGGGTTCCAGCGAGGCGTGCAGACAGGAGTATGTTGGAGTTCAAAT GAGGCATTTACTGAAAATCATATCTGACTTTCACAAAATGTTTGTACCCA AGGAAAGCAGTTGCAATAGTTTATATGCGGTGATAACATGGAAGCGTTTC AGGCCTCATCTCGAGTATCATGAGTTATGTGCAACACGCAGCAAGTTGAG TATCATGAGTTATGTGCAACACGCAGCAAGTTGAGTATCATGAGTTCAGA GCAACGGCAAAGTCACCACGTCCGCCACCGTCTCGAGCGAGTTACGCTTT ATTTTTTGTAAAACACACCGACGGTCAGGTGGAATACTTGGATATATTTT CAGTACACGGAATCAGCAACATGCAGCAGCTGGACTGGACTTTGAAAGAG GGAGGCTGCATGGAAGTCCTGGAGGAGTTTAGGGCCGCTGGTAAAATTCG CTTCATCGGATTCAGCACGCACGGCCACGCTCCCATGATCAAGGCCGCAA TCGCCTCCAACAAATTCGACTGCATCAACATACACTACCAGGTACAGCTG GACGGTGCGTTTGATACTTGCCCCGCCGATACCGAGAGCTTCTCATCGAG CCACACATCACCTCCCGAGCAGGGCATTTTAGACCCGGCGCGAGACTTGA GCGGAGGTGTCGCCCGATATTATTCAAATGCTCCTTTGTTTTTTTTTAGG TCGACTCCAATGATAGAACATTGACCAGACATATACATGCCAAATGCCCT ACTCCGCAGTCTCACGCCCCCAACTCAACGAGGGCACTTAAGGGTCTGAG AAATGGGGTGTGTGCAGTGATCACCCTGCCCATCCATCCATCCATCTATG CGTTGTTTGTTTTACTGCGTCGGCCGGTTAGTTCTTCGGGTCCTACCACG CGTCAGGCACGAATAAGGACAAAGGTGGCTCTAACGGAAATAAAGACAAC GTCGAGCTGGCACACTCCCTAGACATGGGAGTCTTCTGCATTTCTCCCAA CGATAAGGGCGGCATGCTGTACAAGCCTTCCAAGGTGAGTTCAACGAAGG AACGGCGTGGTGCTCGCGTTGTGCGAAAGAGCGACCGTTCTGCGACACGC GTTGCTGTTTTACACCATCCAACAACTCGGGGTTAGAGGCAGGGTAACGG TTGTGACTCGTTTACCATCCTGCGGATTCAATCGCGTTTACGTTATGTTG TCTGTTTTAAACAACCCTCGAACATGCCGCGGTCCACCCCACAGATTGTG GCTGACGCTTGCGCGGAGGTGGGTATCACTCCTATCGAATTCCACAGCCT CTGGCAGTGGAAACACTCGCCCATCGCACATACGTTCACCGTGGGCGCTT CGAGGCCTTCCGACTTGGACGAGCCCGTTGCTGCTGCGAAACTGCTCGAC CGTGCCCACGAGCTGGTGCCTGCGGTGGAAAAGATCCTCAACTCTCGCAT GGTCGAGACGCTGGGTCAGGAGTGGGTATCGACATGGTGGCATGATCTCC CAGGGGCCTACGACACCCCTACAGGTGATTAATATAGCTCTTTTGAATTG ACCCAGTTGAAATAAAGAGGAAGCTTGCAGCACGAGTACTAAGCATAGCT AGGGCAAGTGCGCGACGAGTGGCGTAGGGCTCTACGGCAAAAACTGCGAC GTGCGAGGCGTTTTCCGCATGGATGAACTGACAGCGGCGGGCGAATACAC ATGCTGCGTGCATCCTCAAGAGTGTACCATTAGGGCGATATGTTGTTTCT TACATTAGTTGCCAACCCGAAAAAAATACTTTATACGGTGGCCAATCCCG CTCGTGGTCTGCTGAATAGAGAAAAGAAAACAAAAACAAAAAGTTTGGCA GCGCCCCCCCCGCCCCCCTTTCCCACGCTGCTCATTCGGAGAAAATATAA TAAAAATCCCGAGACGTACCTACATTTATGGGGCCTCCGATGAGCTTTAC AGTGCTGTCATACAATCATGGCATGATGAAGCGTTTCTGAAGTCAGCTAC CGTCGCTATACGCCGCAGGCGTGTTTGTACCTCACGTCGTGTGGTTGTGG AACGTGGTGAAGGCGTGGGGCATGTACGACTTCGCTCGGGCTAGGTGAGG CCGATTGTCGTTGACAGTCCACCTCGCGAGCGTCCTAAGCAACAAAAAAA AACGTGGTGGTTGAGGTCGGGGGTTCCTCGCTATATAATGGCACAGCAGG GGTATAAGACTCGAGTGGCATGTTGGATTGGAAACGTGAAAATAATTTCA AAGTGACGTGTTGGATAGATTTACTGATGAACATCCTATTATCAGATCCG ATAAATTGGAGGCGAAATATTTGTTTCTGAAAACTCGACCGTCCGCCTTC CACGTTGATGCGCACAAATAAACTTTTGAAGTACTTCCGCTTAATTTTTT CACGCTGACTCGCACGGTCGGCGACTTAGGAAAACTGTTTCTGAGATACG TGGCATCAAGTACGAGCCTGAGATTATGAGGTAGACAACCTCCCACACAT TGTATCGCAACACACTCAAAACATCACCTCGCATTCTTCGCTTCCACTTG AATCTATTAGATTCGACCACCCGCCGGAGGCTTGTGTGGTGTATACCTGT ATATACAGTGTGTCTACATCGCATATGCCCACTGTACCGATAGCGGGTGT GGTAAAAGAGGGTCGGACAAAAAAATGTCATTATAATTTCCTGAAAATTC AGCATCCGTTACTCGAGCTATCTTGGCTAACGGCCTTGTACCGGCGGACT CTCGGCGGTATACGCCATCGGTATGCATTTGCGTGACCCGTTAAACTCGA GACAGATCCGATGGTGGACGCCGTCACGGAAAGCGGGAGGGCTATTCAGT AAGCACCAGATTTAGCCTGAGTGTGGAGAATGAGGGGACTGACGCGAGAC AGGACAGCCGAACCTGTTTCGCGAGACCACATTCTCAGACGGAAACGGGG ACAGGGAAAAAATAACATTTTTCCTGTTCAGCTGACCACGAGCAGGACCG GCAGCCATACCCTGCTGATCCATCCTTTGCTGGATGTGCTGACTACATAT ATATATACATATACATAAATTTTGCATCAACCTTTAATATTAGACACCGG TTGATTTTCAGGTACGCCACGCTCGAGGCAAACATGGCCAAGTACAAGCC CGAGCTGTCCGATCAAGAAAACATGGATGCCTGGATTTCCTTCATGCCAG GGTTCCCTTATAGACCCGGCATCGATATGGAGCCTCACATCCCTGACACT TGCCCGAACAAGACTAAGGTGAAACGAAAAAGGATCTATCAGACGATGTA TTGTTTATGTCTCAAAGTCGCCACAAGGAAACGCTAGTGTAGTAAAAATA TTTGGCCGCGAGAAAATTTTCGTCTCACCCAGACAGTACCAACGTATGTG CCCTGCTCCTACTCGCCTGCATCGCCCTTGTTATTATTACTATTTTTTCT TTCTTTTTTTTTCTTTCATTTCACTTTTAGCCGATAGGCCCAAACGTTGT CATCCTGCCTGTGGTCTTTAAGGATCATCCGATCTCTCCCCGGTTCACGC CTTACGAATTTTTATCTTCAACACTGGTAAAAGGTGCTGGACGTCCTAAA GGAGGCGCACGAGTGGCTGTGCAAAGAGAACGAAGTGGAAGTGCGCAAAA CGTTGGAAGAACGCGGATGGCTCGCGGCCTACGACCTGCAGCCGGACATA CCGTTCGCTGAGAGATCCTAA
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig894:191693..197663+

>mRNA_A-nodosum_M_contig894.9.1 ID=mRNA_A-nodosum_M_contig894.9.1|Name=mRNA_A-nodosum_M_contig894.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1503bp|location=Sequence derived from alignment at A-nodosum_M_contig894:191693..197663+ (Ascophyllum nodosum dioecious)
ATGAGAGCCGAGTATTTCCGGTTATCTGCCCTTGGCCACAAGGATGCCGA
TCTGGTGGCCAAGCTCAAGGAAGCCTATCACAAGATGGTCGATCGTACCG
ATCCCTTGCACAGGCATCGTGGGGACAGGGTTCCAGAGAAATGGGACTGC
CCAAAGGTAAGGTTCGGAAAGACCGAGCTGATGATGCCGATCATCACGTG
CGGAGGCATGCGGCAGCAGTTCACGTGGAAACCTCAGTCGACGGTGACGA
ACGATGACATCAGCAAAGAATGTGACAAGAACTTCCAAGCCATCGTGGAC
AGGTCCCTGGAGCTGGGGATCAACCACTTTGAGACCGCCCAGGGGTACGG
GACCAGCGAGATCCAGTTCGGGCGAGCGTTCAAGAAGCACGACAGATCGT
CGTACATCCTGCAAACTAAGGGTGTCCCAAAGGAAGACCCCAAAGCTTTC
CGCGAGGGTCTAGAACTGAGCTTCAAGAAGCTGCAAGTGGAATACTTGGA
TATATTTTCAGTACACGGAATCAGCAACATGCAGCAGCTGGACTGGACTT
TGAAAGAGGGAGGCTGCATGGAAGTCCTGGAGGAGTTTAGGGCCGCTGGT
AAAATTCGCTTCATCGGATTCAGCACGCACGGCCACGCTCCCATGATCAA
GGCCGCAATCGCCTCCAACAAATTCGACTGCATCAACATACACTACCAGT
TCTTCGGGTCCTACCACGCGTCAGGCACGAATAAGGACAAAGGTGGCTCT
AACGGAAATAAAGACAACGTCGAGCTGGCACACTCCCTAGACATGGGAGT
CTTCTGCATTTCTCCCAACGATAAGGGCGGCATGCTGTACAAGCCTTCCA
AGATTGTGGCTGACGCTTGCGCGGAGGTGGGTATCACTCCTATCGAATTC
CACAGCCTCTGGCAGTGGAAACACTCGCCCATCGCACATACGTTCACCGT
GGGCGCTTCGAGGCCTTCCGACTTGGACGAGCCCGTTGCTGCTGCGAAAC
TGCTCGACCGTGCCCACGAGCTGGTGCCTGCGGTGGAAAAGATCCTCAAC
TCTCGCATGGTCGAGACGCTGGGTCAGGAGTGGGTATCGACATGGTGGCA
TGATCTCCCAGGGGCCTACGACACCCCTACAGGCGTGTTTGTACCTCACG
TCGTGTGGTTGTGGAACGTGGTGAAGGCGTGGGGCATGTACGACTTCGCT
CGGGCTAGGTACGCCACGCTCGAGGCAAACATGGCCAAGTACAAGCCCGA
GCTGTCCGATCAAGAAAACATGGATGCCTGGATTTCCTTCATGCCAGGGT
TCCCTTATAGACCCGGCATCGATATGGAGCCTCACATCCCTGACACTTGC
CCGAACAAGACTAAGGTGCTGGACGTCCTAAAGGAGGCGCACGAGTGGCT
GTGCAAAGAGAACGAAGTGGAAGTGCGCAAAACGTTGGAAGAACGCGGAT
GGCTCGCGGCCTACGACCTGCAGCCGGACATACCGTTCGCTGAGAGATCC
TAA
back to top