prot_A-nodosum_M_contig893.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig893.4.1
Unique Nameprot_A-nodosum_M_contig893.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length402
Homology
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BLAST of mRNA_A-nodosum_M_contig893.4.1 vs. uniprot
Match: D8LRY9_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 5.060e-23
Identity = 104/299 (34.78%), Postives = 133/299 (44.48%), Query Frame = 0 
Query:   13 RNFSEVVAGRLKATRLSVEAEMRVADKVAAARGE-MALVEPD---WRGNHILRGDVLSRLEAFRIYNIREAATGEPGFSLAKLRQDLVQRLRDTREVVIDRINSNYKAAATAAGVHGFQLSPAVSDNEVLMGI-DDAAQCVLQQLKATYYLVAEEVRHPTVRVPIGNIGKRLLEKQQAAKTAAAKEL-------FKGHVRSETDSCAGVTSAHSPIKITTNTRRLPSGASPSTKKTRRHGSGGRRCKNVECSLHPHFGFTRPEYCSRHKLPGMFNVKGXXXXXXXXXRTPVYGKKGDPH 299
            ++F+EV+  RL+AT  +VEAE+    K A ARG+  A   P    WRG+  LRGDVLSRLEA+R  N  E   G PG    +                ++ I+   +A A A G  G              G+ +D A  + Q L+      A EV    V+  +   G    + + A + AAA                      A       P                  KK +R G+G RRCK+  C LHPHFG TRPEYCS+HKLPGMFNVKG         RTPVYG+ GDPH
Sbjct:  389 KSFNEVLVERLQATCQAVEAEL----KAAKARGDDTAFCNPPQHHWRGSGALRGDVLSRLEAYRREN--EGNCGMPGSGHGRFSS-------------LNCIDDFERANALARG--GXXXXXRHRXXHAGGGLAEDGAGDLRQGLET-----AIEVTRGAVKSELLMFG----DDEPAQRNAAAHPARSXXXXXXXXXXXXXXXXVAPTARGGGPXXXXXXXXXXXXXXXXXXKKRKRSGNG-RRCKHEGCLLHPHFGLTRPEYCSKHKLPGMFNVKGRRCIHPECTRTPVYGRSGDPH 656
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig893.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY9_ECTSI5.060e-2334.78EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 281..315
e-value: 5.6E-6
score: 26.8
coord: 319..353
e-value: 4.9E-8
score: 33.4
coord: 246..277
e-value: 7.7E-5
score: 23.2
NoneNo IPR availableGENE3D6.10.140.110coord: 260..321
e-value: 1.5E-6
score: 30.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig893contigA-nodosum_M_contig893:17150..19441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig893.4.1mRNA_A-nodosum_M_contig893.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig893 17119..19479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig893.4.1 ID=prot_A-nodosum_M_contig893.4.1|Name=mRNA_A-nodosum_M_contig893.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=402bp
MEAEVPIIAAIGRNFSEVVAGRLKATRLSVEAEMRVADKVAAARGEMALV
EPDWRGNHILRGDVLSRLEAFRIYNIREAATGEPGFSLAKLRQDLVQRLR
DTREVVIDRINSNYKAAATAAGVHGFQLSPAVSDNEVLMGIDDAAQCVLQ
QLKATYYLVAEEVRHPTVRVPIGNIGKRLLEKQQAAKTAAAKELFKGHVR
SETDSCAGVTSAHSPIKITTNTRRLPSGASPSTKKTRRHGSGGRRCKNVE
CSLHPHFGFTRPEYCSRHKLPGMFNVKGRRCMDSECSRTPVYGKKGDPHP
TYCAAHKLDNMIDIKNPTCREQSCNRQPSFGLPQDRRATYCASHMLGGMV
NVRRMLAAKGLSRRLCRERLSAADTEACIAKLSASRRGETRADIRGPLGG
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys