prot_A-nodosum_M_contig883.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig883.5.1
Unique Nameprot_A-nodosum_M_contig883.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length127
Homology
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5KQ16_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ16_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 7.400e-21
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGGLVHFARNKQALRNIPYTVYHEAKSVRGHPDAINRDE 123
            Y QT EF YLGG VN   DL+ E++ R R  W   R+Y   L DR  AP  LK R+L+AE ++ +LYGC++WSP + HY TL     +H   ++  LR + Y    +     GH   + R E
Sbjct:   72 YAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRS---IH---HRLLLRVVGYKRKKDTYRQLGHAQTLKRVE 187          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5K038_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K038_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.230e-20
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTL 83
            Y QT EF YLGG VN   DL+ E++ R R  W   R+Y   L DR  AP  LK R+L+AE ++ +LYGC++WSP + HY TL
Sbjct:   72 YAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTL 153          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.330e-20
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGG------LVHFARNKQALRNIPY 103
            Y QT EF YLGG VN   DL+ E++ R R  W   R+Y   L DR  AP  LK R+L+AE ++ +LYGC++WSP + HY TL          ++ + R K   R + Y
Sbjct:   72 YAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSY 179          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5LCI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCI9_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 6.260e-20
Identity = 45/108 (41.67%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGG------LVHFARNKQALRNIPY 103
            Y QT EF YLGG VN   DL+ E++ R R  W   R+Y   L DR +AP  LK R+L+AE ++ +LYGC++WSP + HY TL          ++ + R K   R + Y
Sbjct:  108 YAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGWELFDRPNAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSY 215          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5JYZ4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYZ4_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 7.440e-20
Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGGLVHFARNKQALRNI 101
            Y QT EF YLGG VN   DL+ E++ R +  W   ++Y   L DR  AP  LK R+L+AE ++ +LYGC++WSPR  HY      G++    ++  LR I
Sbjct:   70 YAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY------GMLQTTHHRLLLRVI 163          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5KMX9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX9_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 9.570e-20
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGG------LVHFARNKQALRNIPY 103
            Y QT EF YLGG VN   DL+ +++ R R  W   R+Y  GL DR   P  LK R+L+AE ++ +LYGC++WSP + HY TL          ++ + R K+  R + Y
Sbjct:  252 YAQTTEFRYLGGLVNEHGDLTRKINYRSRGAWACLRRYGRGLFDRPKGPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSMHHRLLLRVIGYKRKKETYRQLAY 359          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.090e-19
Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGGLVHFARNKQALRNIPY 103
            Y QT EF YLGG VN   DL+ E++ R +  W   ++Y   L DR  AP  LK R+L+AE ++ +LYGC++WSPR  HY      G++    ++  LR I Y
Sbjct:   51 YAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY------GMLQTTHHRLLLRVIGY 146          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.150e-19
Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGGLVHFARNKQALRNIPY 103
            Y QT EF YLGG +N   DL+ E++ R +  W   R+Y   L DR  AP  LK R+L+AE ++ +LYGC++WSPR  HY      G++    ++  LR I Y
Sbjct:  102 YAQTTEFRYLGGLINEQGDLTREINHRSKAAWACIRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY------GMLQTTHHRLLLRVIGY 197          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5KXX8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX8_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.160e-19
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTL 83
            Y QT EF YLGG VN   DL+ E++ R +  W   ++Y   L DR  AP  LK R+L+AE ++ +LYGC++WSPR  HY  L
Sbjct:   80 YAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGML 161          
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Match: A0A6H5JQE3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQE3_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.200e-19
Identity = 45/108 (41.67%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    2 YDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAPLELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGG------LVHFARNKQALRNIPY 103
            Y +T EF YLGG VN   DL+ E++ R R  W   R+Y   L DR  AP  LK R+L+AE ++ +LYGC++WSP + HY TL          ++ + R K   R +PY
Sbjct:  278 YAKTTEFRYLGGLVNEHRDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKATYRQLPY 385          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig883.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ16_9PHAE7.400e-2140.16Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K038_9PHAE2.230e-2050.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JAH7_9PHAE3.330e-2041.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LCI9_9PHAE6.260e-2041.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYZ4_9PHAE7.440e-2042.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KMX9_9PHAE9.570e-2040.74Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLH5_9PHAE1.090e-1942.16Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLX9_9PHAE1.150e-1942.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXX8_9PHAE1.160e-1947.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQE3_9PHAE1.200e-1941.67Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig883contigA-nodosum_M_contig883:39047..39427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig883.5.1mRNA_A-nodosum_M_contig883.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig883 39015..39627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig883.5.1 ID=prot_A-nodosum_M_contig883.5.1|Name=mRNA_A-nodosum_M_contig883.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=127bp
MYDQTNEFVYLGGDVNHSSDLSIEVDRRIRNVWCSFRKYTHGLHDRTSAP
LELKTRMLKAEVLDTMLYGCVSWSPRACHYDTLWRGGLVHFARNKQALRN
IPYTVYHEAKSVRGHPDAINRDESRE*
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