prot_A-nodosum_M_contig88.30.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig88.30.1
Unique Nameprot_A-nodosum_M_contig88.30.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length592
Homology
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BLAST of mRNA_A-nodosum_M_contig88.30.1 vs. uniprot
Match: A0A6H5KYY0_9PHAE (Response regulatory domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY0_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 5.860e-144
Identity = 231/355 (65.07%), Postives = 270/355 (76.06%), Query Frame = 0 
Query:   35 SPAWVWVDVGMAWAMAPLAGGNLQLSLWGSIVPSWLSITVALGYGLCAEEVALNRIETAAPLGLLAMVVVCGLCPLAIGYQVMWEHAKDRITMMDLADEIVETDKRGRHARFSELLLRHLVTEPALHVLAAGVKELFNDAKTFVIHSDALQQIKDGIDTFADHGETALGRLRSGAPDLPPPAFELADMEAILDACLHTTAYLAVSRDHHAVQLDLKVSPHVAKMVKTFRLWLSQMTRACLIHSLHPEEKSTVTLRVHYARPGLLRVGVEAIWRVRA--TGKGGK---GLASRQR-----LTGWDNEMPEAAWWVRAAALSLGGEADYSFSTHTPGFHELWFTLPAENVSDESKRE 379
            +PAW WVDVG+AWA+AP AGG+LQLSLWGSIVPSWL +TVAL YGL AEEVAL+       L L A +VVCGL  LA+GYQV+WE A+D  T+M L D I   D R R A FSELLLRHLVTEP+LHVL AGVKELF DA+ FV+HSDAL+QI+DG+   A++GE AL  L++GA +LP P  E ADME ILDACL TTAYLAVSRDHH VQLDL+V+ +V K VK +RLWLSQMTRACLIH+LHP+E  +V LRV YARPGL+RVG+EA+WRV    TG GG    G ++  R     L+GWD +MP A WWVRAAAL+LGGEADY  S    GFHELWFT+PAENV D+   E
Sbjct:   27 TPAWAWVDVGIAWAIAPAAGGSLQLSLWGSIVPSWLCVTVALAYGLRAEEVALDGDGADGALILFASLVVCGLSALAVGYQVLWEQARDARTLMALEDSIDFEDHRRRQAAFSELLLRHLVTEPSLHVLEAGVKELFKDARIFVLHSDALEQIQDGVSLLAEYGEKALSGLKNGASELPTPVLEKADMEEILDACLRTTAYLAVSRDHHKVQLDLRVAANVDKSVKIYRLWLSQMTRACLIHALHPDEDDSVILRVSYARPGLMRVGIEAVWRVAGSRTGSGGSWGDGTSADHREAPRVLSGWDRDMPAAVWWVRAAALALGGEADYDRSRDREGFHELWFTIPAENVPDDDDLE 381
[Close]
BLAST of mRNA_A-nodosum_M_contig88.30.1 vs. uniprot
Match: D7FY83_ECTSI (Response regulatory domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY83_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 2.690e-99
Identity = 167/262 (63.74%), Postives = 198/262 (75.57%), Query Frame = 0 
Query:  128 MDLADEIVETDKRGRHARFSELLLRHLVTEPALHVLAAGVKELFNDAKTFVIHSDALQQIKDGIDTFADHGETALGRLRSGAPDLPPPAFELADMEAILDACLHTTAYLAVSRDHHAVQLDLKVSPHVAKMVKTFRLWLSQMTRACLIHSLHPEEKSTVTLRVHYARPGLLRVGVEAIWRVRATGKGGKGL-----ASRQR-----LTGWDNEMPEAAWWVRAAALSLGGEADYSFSTHTPGFHELWFTLPAENVSDESKRE 379
            M L D +   D R R + FSELLLRHLVTEP+LHVL AGVKELF DA+ FV+HSDAL+QI+DG+   A++GE AL  L++GA +LP P  E ADME ILDACL TTAYLAVSRDHH VQLDL+V+  V K VKT+RLWLSQMTRACLIH+LHP+E  +V LRV YARPGL+RVG+EA+WRV  + +GG        ++ QR     L+GWD +MP AAWWVRAAAL+LGGEADY  S    GFHELWFT+PAENV D+   E
Sbjct:    1 MALEDSMDFEDHRRRQSAFSELLLRHLVTEPSLHVLEAGVKELFKDARIFVMHSDALEQIQDGVSLLAEYGEKALSGLKNGASELPTPVLEKADMEEILDACLRTTAYLAVSRDHHKVQLDLRVAADVDKSVKTYRLWLSQMTRACLIHALHPDEDDSVILRVSYARPGLMRVGIEAVWRVAGSREGGXXXXXXXTSADQREAPRVLSGWDRDMPAAAWWVRAAALALGGEADYDRSRDREGFHELWFTIPAENVPDDDDLE 262
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig88.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYY0_9PHAE5.860e-14465.07Response regulatory domain-containing protein n=1 ... [more]
D7FY83_ECTSI2.690e-9963.74Response regulatory domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..550
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 471..566

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig88contigA-nodosum_M_contig88:256737..266938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig88.30.1mRNA_A-nodosum_M_contig88.30.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig88 256737..266938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig88.30.1 ID=prot_A-nodosum_M_contig88.30.1|Name=mRNA_A-nodosum_M_contig88.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=592bp
VELSGSTLAVSCNSTSTFGDECSGLAKNPLPLKASPAWVWVDVGMAWAMA
PLAGGNLQLSLWGSIVPSWLSITVALGYGLCAEEVALNRIETAAPLGLLA
MVVVCGLCPLAIGYQVMWEHAKDRITMMDLADEIVETDKRGRHARFSELL
LRHLVTEPALHVLAAGVKELFNDAKTFVIHSDALQQIKDGIDTFADHGET
ALGRLRSGAPDLPPPAFELADMEAILDACLHTTAYLAVSRDHHAVQLDLK
VSPHVAKMVKTFRLWLSQMTRACLIHSLHPEEKSTVTLRVHYARPGLLRV
GVEAIWRVRATGKGGKGLASRQRLTGWDNEMPEAAWWVRAAALSLGGEAD
YSFSTHTPGFHELWFTLPAENVSDESKREFGEREADEISVSEQLSLPRPE
QRSPGQQTADSDAPLQTDDESEDLKDASSFSNDISMSSAKPGGGRGRIGV
VRYGLPRPGAVVVASSRKRSLSALSKRRPKAQPQESFARSATRIAKKRSR
VGADVARQPRRVHDRSRSSSAPPPRNRAARTGEGGGARERVRRHSAKDPG
GTGRASDGSEIDSSDISDLSAPNLKILFVDPEGLLRWVLPRL
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