prot_A-nodosum_M_contig879.16.241 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig879.16.241
Unique Nameprot_A-nodosum_M_contig879.16.241
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length527
Homology
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BLAST of mRNA_A-nodosum_M_contig879.16.241 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 4.800e-89
Identity = 157/208 (75.48%), Postives = 174/208 (83.65%), Query Frame = 0 
Query:  277 KKGKADTSQRTLSTAATSSEFERLPSVEAAVPEAGGDLSNPPAVSPFPNWEEDSEELIGSKVRVYWDGDNEWYSGRIVRHKPSRSKSYLVRYDEDGSVEWMDLPKEPAIVARQVVWVKMRSHPWWPAQVYQPTGSAAMKDGMIEVKDRHAFVVFFKTDESGFVPVGQNVIQAFDSRPDLLKPPKKLSKGLEKAIAAAYTEIKSMADAA 484
            KKGKAD               E L SVEAAVPEAGGDLS+PPAVSPFPNW EDS E++GS+VRVYWDGDNEWYSGRIVR K ++ + YLVRYDEDGSVEW++LP++PAIVARQVVWVKMRSHPWWPAQVYQPTG  AM+DGMIEVK+RHAFVVFFKTDESGFVPVGQNVIQ+F SR DL  P KK SKGLEKAI AA +EI +MA+AA
Sbjct:  228 KKGKADKG-------------EGLASVEAAVPEAGGDLSSPPAVSPFPNWAEDSYEMVGSRVRVYWDGDNEWYSGRIVRFKSTQREPYLVRYDEDGSVEWLNLPEQPAIVARQVVWVKMRSHPWWPAQVYQPTGPKAMQDGMIEVKERHAFVVFFKTDESGFVPVGQNVIQSFASRQDLANPAKKPSKGLEKAIIAAKSEIGNMAEAA 422
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BLAST of mRNA_A-nodosum_M_contig879.16.241 vs. uniprot
Match: A0A6H5KE90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE90_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 3.780e-26
Identity = 55/70 (78.57%), Postives = 62/70 (88.57%), Query Frame = 0 
Query:  298 ERLPSVEAAVPEAGGDLSNPPAVSPFPNWEEDSEELIGSKVRVYWDGDNEWYSGRIVRHKPSRSKSYLVR 367
            E L SVEAAVPEAGGDLS+PPAVSPFPNW EDS E++GS+VRVYWDGDNEWYSGRIVR K ++ + YLVR
Sbjct:  236 EGLASVEAAVPEAGGDLSSPPAVSPFPNWAEDSYEMVGSRVRVYWDGDNEWYSGRIVRFKSTQREPYLVR 305
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BLAST of mRNA_A-nodosum_M_contig879.16.241 vs. uniprot
Match: B7FWM0_PHATC (Ribonucleoprotein associated TUDOR protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWM0_PHATC)

HSP 1 Score: 57.8 bits (138), Expect = 4.910e-5
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:  330 SEELIGSKVRVYWDGDNEWYSGRIVRHKPSRSKSYLVRYDEDGSVEWMDL 379
            S+  IG +V VYWDGDNE+Y G+I+  K  +  S+ ++YD DG  EW++L
Sbjct: 1041 SKVSIGCRVAVYWDGDNEYYKGKIMSIKKDKKASFYLKYD-DGEDEWINL 1089
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig879.16.241 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHU3_ECTSI4.800e-8975.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE90_9PHAE3.780e-2678.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7FWM0_PHATC4.910e-548.00Ribonucleoprotein associated TUDOR protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 330..390
e-value: 1.6E-4
score: 31.0
IPR002999Tudor domainCDDcd04508TUDORcoord: 335..379
e-value: 5.35767E-4
score: 36.0368
IPR000313PWWP domainPFAMPF00855PWWPcoord: 389..474
e-value: 3.8E-10
score: 40.1
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 387..441
score: 11.539949
NoneNo IPR availableGENE3D2.30.30.140coord: 382..490
e-value: 3.4E-14
score: 54.8
NoneNo IPR availableGENE3D2.30.30.140coord: 331..381
e-value: 1.8E-8
score: 35.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..297
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 383..483
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 332..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig879contigA-nodosum_M_contig879:242532..253268 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig879.16.241mRNA_A-nodosum_M_contig879.16.241Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig879 242532..253502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig879.16.241 ID=prot_A-nodosum_M_contig879.16.241|Name=mRNA_A-nodosum_M_contig879.16.241|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=527bp
MQNGRPASDSGCEKKEDHQSNSNTNLSSPAAKPSKPPPSKRSPELTGWTS
MAERLRASSTVGDATYSTTGVLPWVRNKNARETPGGGGGSAKRSAPGIKK
GGAASKDSERRVSNGHRTGQAEAEAAAAMTALAGCLAMHPGAPSSSFSSA
KGNKNKPAPVRHSPAPLASPTPKKRKEVGGKPVVGGGGTAKASDRTAASG
MGTGDPFQTGESASSVKVEAPDLSDDVDSRAGGVGGGFEVGKDRDKENGG
EEEGDRGEGLLHKRKAAIVGGRQGPKKKGKADTSQRTLSTAATSSEFERL
PSVEAAVPEAGGDLSNPPAVSPFPNWEEDSEELIGSKVRVYWDGDNEWYS
GRIVRHKPSRSKSYLVRYDEDGSVEWMDLPKEPAIVARQVVWVKMRSHPW
WPAQVYQPTGSAAMKDGMIEVKDRHAFVVFFKTDESGFVPVGQNVIQAFD
SRPDLLKPPKKLSKGLEKAIAAAYTEIKSMADAAKRSAQESYAGEDGEEP
PVPQPPGAARKPKPKKDGTPKASKKTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor
IPR000313PWWP_dom