prot_A-nodosum_M_contig877.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig877.11.1
Unique Nameprot_A-nodosum_M_contig877.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length390
Homology
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BLAST of mRNA_A-nodosum_M_contig877.11.1 vs. uniprot
Match: A0A6H5KUF2_9PHAE (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF2_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.720e-86
Identity = 134/209 (64.11%), Postives = 159/209 (76.08%), Query Frame = 0 
Query:   53 ETEGPSSRSLPDMVGEVLRCVVCLLKQRDVVALSETCRSLRQVERVFSSGQQAFPLGPTVDDRHGNTDDAVEVDTETGVLRKAVRPGMGTILARERVDKMTCYWEFKIEAFSGVRLDIGVATRRSVRRGGLDKDEVWTFDCYGRVCHGTRVRGYGCKVKAGDCVGVLLNTADCSLSFFLQGKSMGTAFRNVRPPASSGQGLYPIVVLPS 261
            E   P +  L DM GE LR V+CLL+QRD+V L  TCRSLRQ++  F SG++AFPL PTVD+RHGN D+AVEVDTETG LRK  RPGMGTI+A+ERVDKMTCYWE KI+ F+GVRL++GVATRRS+ RGG DKDE W  DCYGR CHGTR+RGYGCK+KAGD +GVLLNTAD SLSFF++G  +            S   LY +V+L S
Sbjct:   44 ERREPFAMGLVDMAGEFLRSVICLLEQRDMVILGGTCRSLRQIQGGFVSGEEAFPLLPTVDERHGNEDNAVEVDTETGALRKTPRPGMGTIMAKERVDKMTCYWEVKIQVFTGVRLEVGVATRRSIYRGGCDKDECWVIDCYGRACHGTRLRGYGCKLKAGDVLGVLLNTADDSLSFFVKGMHLTMV--------CSDDDLYTLVLLTS 244
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BLAST of mRNA_A-nodosum_M_contig877.11.1 vs. uniprot
Match: D8LU41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU41_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 3.790e-59
Identity = 106/182 (58.24%), Postives = 128/182 (70.33%), Query Frame = 0 
Query:    7 TEALVDGFGAVSVGDERSRFQVQPVLESVPTSCRKFAAEDGQPGKKETEGPSSRSLPDMVGEVLRCVVCLLKQRDVVALSETCRSLRQVERVFSSGQQAFPLGPTVDDRHGNTDDAVEVDTETGVLRKAVRPGMGTILARERVDKMTCYWEFKIEAFSGVRLDIGVATRRSVRRGGLDKDEV 188
            TE L      VS+ D+ S  QV+   ES        A       + E   P +  L DM GEVLR V CLL+Q D+V L  TCRSLRQ++R F+SG++AFPL PTVD+RHGN D+AV+VDTETGVLRK  RPGMGTI+A+ERVDKMTCYWE  I+ F+GVRL++GVATRRS+ RGG DKDEV
Sbjct:    5 TEGLAMDLKGVSLEDDAS--QVRRDDESTHLESTVAAV------RCERREPFAMGLVDMAGEVLRSVTCLLEQHDMVILGGTCRSLRQIQRGFASGEEAFPLRPTVDERHGNEDNAVQVDTETGVLRKTPRPGMGTIMAKERVDKMTCYWEVNIQVFTGVRLEVGVATRRSIYRGGCDKDEV 178
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig877.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUF2_9PHAE1.720e-8664.11B30.2/SPRY domain-containing protein n=1 Tax=Ectoc... [more]
D8LU41_ECTSI3.790e-5958.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003877SPRY domainSMARTSM00449SPRY_3coord: 151..273
e-value: 9.6E-6
score: 35.1
IPR003877SPRY domainPFAMPF00622SPRYcoord: 154..260
e-value: 5.2E-14
score: 52.3
IPR043136B30.2/SPRY domain superfamilyGENE3D2.60.120.920coord: 121..269
e-value: 1.7E-21
score: 78.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..61
NoneNo IPR availableCDDcd11709SPRYcoord: 155..261
e-value: 2.98654E-18
score: 77.8562
IPR001870B30.2/SPRY domainPROSITEPS50188B302_SPRYcoord: 77..276
score: 12.851151
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 141..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig877contigA-nodosum_M_contig877:243595..272205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig877.11.1mRNA_A-nodosum_M_contig877.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig877 243499..272819 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig877.11.1 ID=prot_A-nodosum_M_contig877.11.1|Name=mRNA_A-nodosum_M_contig877.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=390bp
MDKGFTTEALVDGFGAVSVGDERSRFQVQPVLESVPTSCRKFAAEDGQPG
KKETEGPSSRSLPDMVGEVLRCVVCLLKQRDVVALSETCRSLRQVERVFS
SGQQAFPLGPTVDDRHGNTDDAVEVDTETGVLRKAVRPGMGTILARERVD
KMTCYWEFKIEAFSGVRLDIGVATRRSVRRGGLDKDEVWTFDCYGRVCHG
TRVRGYGCKVKAGDCVGVLLNTADCSLSFFLQGKSMGTAFRNVRPPASSG
QGLYPIVVLPSVPHETLTMSRRPVAAGAIFPVPVRSLLSRKFDSRLHPND
WDIIVQTYDEQSIFRLGGLDPTRTTVGGLKKALARCGNMQMFSTGQMSLR
THGALLTDDSVLLSKAGVSFGTRGAQLQDIFLYLPHLIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003877SPRY_dom
IPR043136B30.2/SPRY_sf
IPR001870B30.2/SPRY
IPR013320ConA-like_dom_sf