prot_A-nodosum_M_contig876.28.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig876.28.1
Unique Nameprot_A-nodosum_M_contig876.28.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1110
Homology
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BLAST of mRNA_A-nodosum_M_contig876.28.1 vs. uniprot
Match: A0A6H5JT02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT02_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.700e-13
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 0 
Query:   70 MEEARMELRQLSFKISKCEIALESHGSYLGITDPAILLDQLKALQRKDEQLREMLLILMRTSPLHGP 136
            + E RMELR +S K+S CE ALE HG+YLGI DPA LL QL+ LQ+K+EQLRE+LLIL+RT+ L  P
Sbjct:    8 LSETRMELRAVSSKLSSCEQALEGHGAYLGIRDPATLLGQLQTLQKKEEQLREVLLILLRTTALQPP 74
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BLAST of mRNA_A-nodosum_M_contig876.28.1 vs. uniprot
Match: D8LTN4_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN4_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 4.350e-8
Identity = 70/175 (40.00%), Postives = 85/175 (48.57%), Query Frame = 0 
Query:  742 RPPRKRRKSAQTGGWRSRYNADEFEQGEFSSSSTSDSDAESHGDVKQPRDGGVGXXXXXXXXGEEEGDAEGDDTLVDVGXXXXXXXXXXXXXXXXXXXXEDSDKDKFGDDGGWGEGGGGGMRRLRL----VNRRIPLNARKRRCADGTCLVGASFGFEGKPAVYCSVHKDAGMVN 912
            RP RKRRKSA+ GGW SRY+ ++F  GE   +    S +E              XXX     G+     EG+  +      XXXXXX               D D   D+    + G G  R+ R     V +R P NA KRRCADGTC +GASF   G+PA YCS H DAGMVN
Sbjct:  307 RPVRKRRKSAEAGGW-SRYSKEDFVSGE---ALVLGSSSEGXXXXXXXXXXXXXXXXNYTIQGQRVSRPEGEKRMRSANSGXXXXXXGWGEDSNALLVDVGGD-DPEDDEDALDDPGVGTTRKRRSAVGPVKKRSPPNAWKRRCADGTCQLGASFAMRGEPAKYCSAHSDAGMVN 476
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig876.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT02_9PHAE2.700e-1364.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTN4_ECTSI4.350e-840.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 918..950
e-value: 1.7E-5
score: 25.3
coord: 955..989
e-value: 3.3E-6
score: 27.6
coord: 881..912
e-value: 5.1E-4
score: 20.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1041..1109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..597
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 804..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 725..747
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 511..622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 658..672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..779
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 997..1012
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 658..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 997..1025
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig876contigA-nodosum_M_contig876:251051..271999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig876.28.1mRNA_A-nodosum_M_contig876.28.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig876 247463..272270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig876.28.1 ID=prot_A-nodosum_M_contig876.28.1|Name=mRNA_A-nodosum_M_contig876.28.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1110bp
MFLSSSTIPPNRRRLSSRMWTWRKWPTRRATRHRDIVVGRLPAARSRRIV
AAPPPAAGGAYVSQNMGETMEEARMELRQLSFKISKCEIALESHGSYLGI
TDPAILLDQLKALQRKDEQLREMLLILMRTSPLHGPQSSPYRVANAAALL
PDPQAPPHQAPPRQTPWPSRATLAPALTPPAPTSRAPTSRAPTTPTPTPP
VSTPASGRARNLRRSCTLAETHDREKRARVAATNASAAAGALAAHPSTSL
PRPPPPPTPAKISTRVAALTPSPLWSSSCPSHLTPRPKTTPAVPPEKTLS
LYEALGLTPPPKASAPVAATGQSARTAEITNNGSGDTSRSSTPTAYFPGW
HTLYRANIPRSEAVGGAGGSANGGKPPGGVRGKISYSSPAAGLRRCGHGA
GIGNLNRHAERGRSQATASVSSTTRGRSSDEGPRAPERGAPANPPKNGDS
TSGGEVSLAGGIRSTLAGGGAGQGVSTMATEMATAALAGPVEDRATVRDL
ADVAMTFNMRRSRVSSPAPAERQERAAGSGARGPSTKDIHGGGDKKMAAE
VRGTTAAASPGVATSAGAPPSETGAQREAVATAAGKMEKEKLVEADGNGG
DEAVVANPARSDRSATSTRGARECQLLTPTMPLRVTLCLTRSSAAAIVKS
EAPTGSTYPSHACSTDAQAGTPAMQQGVEAAKPPARASLDLTPPGNAAPL
VKAESAFGGNGVAKKPSVEMVPTEPDADASRRGNGDDGYEGRPPRKRRKS
AQTGGWRSRYNADEFEQGEFSSSSTSDSDAESHGDVKQPRDGGVGGVGSV
GTEGEEEGDAEGDDTLVDVGGDDILVDVGGDDTVVDVGGDEDSDKDKFGD
DGGWGEGGGGGMRRLRLVNRRIPLNARKRRCADGTCLVGASFGFEGKPAV
YCSVHKDAGMVNATYRRCEGPMCNRRPRFNMVGERAIYCVAHKRNGMVNV
SAPRCIIPGCKLQPSFGFDGDTRATYCDAHKEPRMVNVRTRNYPASCEIR
RPSSTSENDRSENGSIPRTEDAASAVVAALPPSDLPCSIAQDSPPPLPLA
STGTPAEIAAAAPTPTAPGSGTDGDKVDRVNVGGGASGTSAGAHLEEGAI
STLPGVSIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys