prot_A-nodosum_M_contig875.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig875.2.1
Unique Nameprot_A-nodosum_M_contig875.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length237
Homology
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BLAST of mRNA_A-nodosum_M_contig875.2.1 vs. uniprot
Match: A0A6H5K670_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K670_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 2.060e-81
Identity = 140/243 (57.61%), Postives = 176/243 (72.43%), Query Frame = 0 
Query:    1 MKFLYALRREVFALHARCPQNLLRSPTAIPPSVRDQQGRSSLLRHGQGCGSNCGCVMDLQQVSVDREGNVTDATFAAKRFLLGAGGAPMTSPSGKLLLCDCPCETIRSLGSIATSECKGQSLESLRNRLLFSPAAPPSFWRSLMRKVGAPVAASACAQVAEAALTTALTDHPYARI-------NLHARRSGPRHSLTTSRRGSGAGLGANDIPYDDDDDDFVEDVEEDGLAEVDFRNQYDDFA 236
            MK+L+ALRREVFALHAR PQNLLRSP A+P +  +Q+GR SLLRHGQGC        D+Q V+VDREG V DATFAAKR  +G  GAP+ S +G+LL+ DCPC+T+ SLGSIAT+EC+G+SLESLRNRLLFSP+APPSF R+L+RK+G P +A+ CAQV EAALTTALTD PY++          H        ++ T+    G G G + +P D    D   +++EDGLAEVDFR+QYD+ A
Sbjct:    1 MKYLHALRREVFALHARAPQNLLRSPAALPSAAEEQRGRPSLLRHGQGCXXXXXXXXDVQ-VAVDREGVVRDATFAAKRLAMGVDGAPLRSRTGRLLVHDCPCDTLVSLGSIATTECRGESLESLRNRLLFSPSAPPSFVRNLVRKLGQPTSAATCAQVVEAALTTALTDRPYSKPLAVYGGQGSHVAPGQGTGAVATATGPHGGGGGMDGVPLDGTLSDG--EIDEDGLAEVDFRDQYDEEA 240
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BLAST of mRNA_A-nodosum_M_contig875.2.1 vs. uniprot
Match: D8LDD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDD3_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 3.490e-64
Identity = 104/159 (65.41%), Postives = 128/159 (80.50%), Query Frame = 0 
Query:    1 MKFLYALRREVFALHARCPQNLLRSPTAIPPSVRDQQGRSSLLRHGQGCGSNCGCVMDLQQVSVDREGNVTDATFAAKRFLLGAGGAPMTSPSGKLLLCDCPCETIRSLGSIATSECKGQSLESLRNRLLFSPAAPPSFWRSLMRKVGAPVAASACAQV 159
            MK+L+ALRREVFALHAR PQNLLRSP A+P +   Q+GR +LLRHGQGC        D+Q V+VDREG V DATFAAKR  +G  GAP+ S +G+LL+ DCPC+T+ SLGSIAT+EC+ +SLESLRNRLLFSP+APPSF R+L+RK+G P +A+ CAQV
Sbjct:    1 MKYLHALRREVFALHARAPQNLLRSPAALPSAAEVQRGRPALLRHGQGCXXXXXXXXDVQ-VAVDREGVVRDATFAAKRLAMGVDGAPLRSRTGRLLVHDCPCDTLVSLGSIATTECRDESLESLRNRLLFSPSAPPSFVRNLVRKLGQPTSAATCAQV 158
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig875.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K670_9PHAE2.060e-8157.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDD3_ECTSI3.490e-6465.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig875contigA-nodosum_M_contig875:35579..51736 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig875.2.1mRNA_A-nodosum_M_contig875.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig875 35499..53111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig875.2.1 ID=prot_A-nodosum_M_contig875.2.1|Name=mRNA_A-nodosum_M_contig875.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=237bp
MKFLYALRREVFALHARCPQNLLRSPTAIPPSVRDQQGRSSLLRHGQGCG
SNCGCVMDLQQVSVDREGNVTDATFAAKRFLLGAGGAPMTSPSGKLLLCD
CPCETIRSLGSIATSECKGQSLESLRNRLLFSPAAPPSFWRSLMRKVGAP
VAASACAQVAEAALTTALTDHPYARINLHARRSGPRHSLTTSRRGSGAGL
GANDIPYDDDDDDFVEDVEEDGLAEVDFRNQYDDFA*
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