mRNA_A-nodosum_M_contig874.3.7 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: D8LGZ7_ECTSI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ7_ECTSI) HSP 1 Score: 1466 bits (3794), Expect = 0.000e+0 Identity = 796/1208 (65.89%), Postives = 865/1208 (71.61%), Query Frame = 2
Query: 65 MSSDVSSKVSKAGIVDGALRQQRVTKGSSRQPVTGPSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEVGEGGPVLKIWVEGMAVGYPGKKNEESASSKLHPRECRERGLTYQGVLHVDLCYQVGSGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCARKDQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALRDTTDREIHERLLQGDRENTFLAAHVEVLLRESKRWGLHSRMESLAFLGSTFRTLMSATSKTTDVELGKKVIDRFVLVHLTRHADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSVVGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTCR-------------SPSSIESLLVRLGVAPAGTGAGDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVW------VDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVAGKLASPGEVARLRFCNTAPESTGAVRGRRRDDKLHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKTPLSRVSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEKDRVIDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGERVVAVAMP 3631
M SD SK+ G ++Q P TGPSFTL SIP K TA+KRR +GEGGP+LK+WVEG+ VGYPGKKNEE+ ++KL PRECRERGLTY G L VDLCYQVG G +VRTQ+RAGDCPVMVGS RCHL+G G A+L R REEAGEMGG+FIVRGIERVIRLLQVPKRNY HAISR TFK+RGQGYS KG++MRCARKDQ+T+TVTLHYISTGG+TLRFSV KQEFLVPVVIILKALRDT+DREIHER+LQG ++NTFLAAHVEVLLR+ KRWGLHSRMESLAFLGSTFRT++ A + TD+ELGKKVIDR + LR L+ L VRQ IGRDAR + +K VMQV D K++ K LDRFGS VGQGMSTFLSTGN+ S +GLDLMQVSGFTIVAERINFLRYL+HFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDG+PCGLLNHLAT C+ SP S+ESLLVRLGVAPAGTGAGDG+ SLP +FLPV++DGRVVGGG EATL RA VDPTLEVG VP M GGAGPYPGLFLN+ GARMCRPVLHL +G+ EWIGPM QQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAH LTPHR DNKMYKVLFPQAAIVQTRRH EYQ+DDYPQGTNAVVAVISYTG+DMEDAMILNKSSFERGFGH SVLKT VDL+DVAGK A P VARL+FCN P S GA G KLHE LGWDGLP+VGSWV+ GD LYCVVD+LTGKVTVGK TIGMLIESMAGKSGA+HGT+QDATPFAFHE+DRVIDHFGEQLR+AG+AY+GSEPLYSGV GTVMH DIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVC++CGSLLSTSARRG VATAG S IRCITC PA +GG GG +V+AVA+P
Sbjct: 1 MLSDKGKAASKSRSTGGTAQRQ----AGKSHPTTGPSFTLKSIPGKTTADKRR-------------------------------LGEGGPLLKLWVEGVTVGYPGKKNEEATNAKLTPRECRERGLTYHGALLVDLCYQVGDGDVVRTQKRAGDCPVMVGSRRCHLRGHGPARLTRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARKDQSTLTVTLHYISTGGATLRFSVRKQEFLVPVVIILKALRDTSDREIHERVLQGQKDNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLQAPATATDIELGKKVIDRVETGWCWPWRCRWNWPRCCLRALFVS------------------------------------LPAVRQLIGRDARMDQAKAVMQVRDAKHMAKYLDRFGSAVGQGMSTFLSTGNVISTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGKAPPPAESPLSLESLLVRLGVAPAGTGAGDGALSLPSSFLPVLVDGRVVGGGSEATLKRAXXXXXXXXXXXXXXXXXXXXXXXXXXVDPTLEVGWVPPMKGGAGPYPGLFLNSEGARMCRPVLHLQSGRMEWIGPMAQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKGAGPAAVARLKFCNVKPGSVGAG-GAAAATKLHEGLGWDGLPMVGSWVQPGDALYCVVDELTGKVTVGK-------------------------------------------------------------------------------------TIGMLIESMAGKSGAMHGTYQDATPFAFHEEDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCSACGSLLSTSARRGAVATAGQSXXXXXXXXXXXXXXXXXXXXXXIRCITC---PA-SGGKGGGGKVLAVAIP 1047
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA) HSP 1 Score: 1417 bits (3669), Expect = 0.000e+0 Identity = 730/1197 (60.99%), Postives = 895/1197 (74.77%), Query Frame = 2
Query: 158 PVTGPSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEVGEGGPVLKIWVEGMAVGYPGKKNEESASSKLHPRECRERGLTYQGVLHVDLCYQVGSGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRC--------------------ARKDQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALRDTTDREIHERLLQGDRENTFLAAHVEVLLRESKRWGLHSRMESLAFLGSTFRTLMSATSKTTDVELGKKVIDRFVLVHLTRHADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSVVGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTCRSPSSIESLLVRLGVAPAGTGAGDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVWVDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVAGKLASPGEVARLRFCNTAPESTGAVRGRRRDDKLHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKTPLSRVSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEKDRVIDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGERVVAVAMPYVFRYLANELAGMGIKVTL 3688
P TGPS+ ++++PS ATAEK +SLV HV+S+N FL EGL +AV D+P + + VGE GP++++W E + +GYPG+ +E++ +KL PRECRER LTY +HV++ YQ+ R QRR G+CP+MV S RCHL GLG ++ +EE E+GG+FIV G+ERVIRLLQVP+RN+ AI R+ FKNRGQ YS G+ MRC R+D +T TVTLHY++TGG+TLR+SV + EFLVPV++++KALR+ +DRE++ER+L GD NT LAA +EVLL ++ R GLH+R + LAFLGS FR + + T +D+ LG ++I+R VLVHL RH DKQE LL ML+K PGHLF M +KE++ + L KVR + + +R + +K ++ D K + KL+DR+G GQ M++FLSTGNIT+ TGLDLMQ SGFT+VAERIN LRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNH+A C+ +LV LG+ PAG G+GDGST+LP+ ++PVM+DGRVVGGG TL + LRRLKVA V+PT+EV L+P M G+GP+PGLFL TG +RM RPVL++ K EWIGP+EQ FMEIACLA + + TH E+DPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAH L PH+ DNKMY++LFPQA +V TRRH E+QMD+YPQGTNAVVAVISYTG+DMEDAMILNKS+FERGF H SV+KT +DLKD+ K S V ++RF NTA + G KL+E+L DGLP +G+ V+ GDPLYC +D T K GKHKESE A VETVRA+G GI+K +++ S+TLRF RNP++GDKFSSRHGQKGVMSILWP DMPFTE+GM+PD+IINPHAFPSRMTIGMLIESMAGK+GALHG FQDATPF+FHEK+RVIDHFGEQL++AG+AYYGSEPLYSG++GTVMH DIFIGLVYYQRLRHMVSDKSQVRA+G VN LTRQPIKGRKNKGG+R GEMERD+LLSHGAAFLLHDRLMNCSDRH+AHVC +CGS+LS +R V +AG S A+R R I ++ + G ++ +VAMPYVFRYLANELAGMGIK+TL
Sbjct: 33 PRTGPSYDISNLPSAATAEKMQSLVDAHVNSFNQFLDEGLNDAVLDLPDVELRVGEDGPLMRLWYESVELGYPGRSRDETSGAKLVPRECRERNLTYGAPIHVNIAYQLEGSEAQRVQRRLGECPIMVRSKRCHLAGLGPKEMVALKEEDTEIGGYFIVGGLERVIRLLQVPRRNHAQAIRRSAFKNRGQVYSDLGVSMRCDHSPLQLXXXXXXXXXXXXXGRRDHSTATVTLHYLTTGGATLRWSVRRAEFLVPVMVVIKALREISDRELYERVLAGDTANTQLAARLEVLLLDAARVGLHTREQCLAFLGSRFRAVGNRTDVHSDLALGIEIINRHVLVHLKRHEDKQETLLHMLKK------------------------PGHLFTMYMKEKLFDVLVKVRSELLKQSRIDVAKALLAAQDPKTIIKLVDRYGIGTGQRMASFLSTGNITTSTGLDLMQASGFTVVAERINMLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHMAAECQ-------ILVSLGMTPAGIGSGDGSTALPYYYMPVMVDGRVVGGGTHETLQAVSRGLRRLKVATPPA------VEPTMEVALLPPMKKGSGPFPGLFLFTGASRMIRPVLNIEFCKREWIGPLEQPFMEIACLASEAKGTGATHCEIDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLYPHKTDNKMYRILFPQAPLVMTRRHREFQMDNYPQGTNAVVAVISYTGFDMEDAMILNKSAFERGFAHASVVKTIKIDLKDLLTKSDSKTMVGKMRFTNTAADGKGG--------KLYENLDNDGLPRIGACVKEGDPLYCAIDLRTNKTKTGKHKESEMAYVETVRAVGGAGINKEAMAKASMTLRFPRNPIIGDKFSSRHGQKGVMSILWPQSDMPFTESGMTPDIIINPHAFPSRMTIGMLIESMAGKAGALHGHFQDATPFSFHEKNRVIDHFGEQLKSAGYAYYGSEPLYSGISGTVMHADIFIGLVYYQRLRHMVSDKSQVRASGAVNPLTRQPIKGRKNKGGIRFGEMERDSLLSHGAAFLLHDRLMNCSDRHLAHVCCTCGSMLSPCHQRSAVTSAGRSEEEVIQASR-------------CRYICRALKTCQDKG-----QIESVAMPYVFRYLANELAGMGIKLTL 1166
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: W7TET2_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET2_9STRA) HSP 1 Score: 1325 bits (3428), Expect = 0.000e+0 Identity = 716/1242 (57.65%), Postives = 868/1242 (69.89%), Query Frame = 2
Query: 104 IVDGALRQQRVTKGSS--RQPVT--------GPSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEV---GEGGPVLKIWVEGMAVGYPGKKNEESASSKLHPRECRERGLTYQGVLHVDLCYQVGSGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCARKDQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALRDTTDREIHERLLQGDRENTFLAAHVEVLLRESKRWGLHSRMESLAFLGSTFRTLMSATSKTTDVELGKKVIDRFVLVHLTRHADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSVVGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTCR-------------SPSSIESLLVRLGVAPAGTGAGDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGG------------AGGLAGVW-VDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLK-DVAGKLASPGEVARLRFCNTAPESTGAVRG--RRRDDKLHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKT--PLSRVSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEKDRVIDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTV---ATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGERVVAVAMPYVFRYLANELAGMGIKVTL 3688
I D ++++ ++ GSS R T GPSFT +P A + + +VAPHV+S+N+FL GL EAV + P+ + + GE GP+LK WVE +G+P + ++ PRECRERGL Y + Q G ++R QR G+ P+MV S RC L G + +L +EEA E GG+FIV GIER+IRLLQ+P+RN+ AISR TFK RG GYS KG+ MRC R DQ+++TVTLHY++ G +T R ++LKQEFLVPVV++LKALRD TD E++ER+ GD +NT+L VE+LLRES + SR ++L++LGS FRT++ ++ +D + G+ ++DRFV +HL HADKQECLL MLRKLYA VQGRC+ DN D+ N ELLLPGHL+ + +KE++E L Q + ++ R + ++ + D Y +LL R G+ VG+ + LSTGN+ S TG+D+MQVSG+TIVAER+NF R+LSHF+SVHRGQFFTTMKTTAVRKLLPES+GFLCPVHTPDG+PCGLLNH+AT R LLV LGV+P G G+ DG+ L + LPV+LDGRVVGG R LRR K A L G VD TLEV + + GG P PGLFL +G ARM RPVLHL TG E+IGPMEQ FME+A L +DVR G TTH+ELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTP S PHR DNK+Y++L PQA IVQTRRHAEY MD++PQGTNAVVAVISYTGYDMEDAMIL+K+S++RG V KT V L+ D+ G P LRF N + A R R D L E L DGLPVVG+WV+ GD LY VD LTG+V VGKHKESE ACVE VR LG EG PL VSITLRF R P++GDKFSSRHGQKGV+SILWP EDMPFTE+GMSPD+IINPHAFPSRMTIGMLIESMAGKSG+LHG +QDATPF+FHE R ID+FGEQLRAAG+AY+GSEPLYSG++GT+MH DIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRK GG+R GEMERD+LLSHG ++LLHDRLMNCSDRH+AHVC CGSL+ + + TV A AG A AAVA+ + + + C C G + VA+PYVFRYL NELA M IK+ L
Sbjct: 17 ICDERIKKKHISNGSSQGRHADTEQVDPGPDGPSFTRGPLPPAAAVCRYKEVVAPHVESFNYFLDTGLREAVSCLFPVELRLSKDGESGPLLKSWVEECEIGFP---TGDGSTGLYTPRECRERGLMYAAPIRAVFRIQREGGGVMRVQRTLGELPIMVCSSRCRLAGKKAEELVALKEEACECGGYFIVNGIERIIRLLQLPRRNHAMAISRNTFKGRGTGYSDKGVTMRCVRPDQSSITVTLHYLTNGNATFRVTILKQEFLVPVVLVLKALRDLTDEELYERITLGDEDNTYLVTRVEMLLRESHDFATFSRNKALSYLGSRFRTVLGLSNAHSDADCGRALVDRFVCIHLGHHADKQECLLHMLRKLYAFVQGRCRADNPDSFMNQELLLPGHLYSVFVKEKLEETLTAAFQQLRKECREDLARALAATQDEAYWAQLLGRHGAGVGKKAAYLLSTGNLVSRTGMDMMQVSGYTIVAERLNFFRFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNHVATAARVLCHEDRLQGGRVRGGLATDLLVGLGVSPGGAGSADGALVLSKDHLPVLLDGRVVGGAPVDICRRVVRALRRFKAVSAPPPNPDAVQGPDAQRLRGKGRVDATLEVAFIHPVRGG--PAPGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPTTSY-PHRTDNKLYRILTPQAPIVQTRRHAEYGMDEFPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLRRDMRGGPKRPD----LRFSNLRTPAVVAKRQFPGRVGDPLFEKLEADGLPVVGTWVKEGDVLYSAVDSLTGEVEVGKHKESEVACVEAVRLLGLEGTSGATEPLDTVSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDIIINPHAFPSRMTIGMLIESMAGKSGSLHGMYQDATPFSFHEDRRAIDYFGEQLRAAGYAYFGSEPLYSGLSGTLMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKRHGGIRFGEMERDSLLSHGTSYLLHDRLMNCSDRHLAHVCQECGSLVGPTMTKSTVLSAAQAGTMTAVAAVASSQAK----------VICRAC------------GGKARTVALPYVFRYLTNELAAMNIKLRL 1226
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA) HSP 1 Score: 1276 bits (3303), Expect = 0.000e+0 Identity = 682/1266 (53.87%), Postives = 874/1266 (69.04%), Query Frame = 2
Query: 113 GALRQQRVTKGSSRQPV----TGPSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEV----------GEGGPVLKIWVEGMAVGYPGKKNEESASS---KLHPRECRERGLTYQGVLHVDLCYQVG-------------SGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCAR--KDQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALRDT-------TDREIHERLLQGDRENTFLAAHVEVLLRESKRW-GLHSRMESLAFLGSTFRTLMSATSKTTDVELGKKVIDRFVLVHLTRHADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSVVGQGMST----FLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLAT-----TCRSP------SSIESLLVRLGVAPAGTG--AGDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVWVDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVAGKLASP--GEVARLRFCNTA------PESTGAVRGRRRDDKLHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKTPLSR---VSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEK-DRV-IDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCIT----CSVDPARAGGSSGGERVVAVAMPYVFRYLANELAGMGIKVTL 3688
GA + T SR+ V T PSF PS + ++ R+L PHV S+++FL GL+E +KD+ P +++ + +K+WVE + V P + S S +L PRECRE GL Y G +H ++C+Q+ I R ++ GD P+MV S CHL G QL + +EE E GG+FIV GIER +RLLQ+P+RN+P AI R+ +K+RG Y+ G+ +RCAR +DQT++T T+HY++TGG++L+F+ KQEFL+P+++IL+AL T +D E++ R+LQGD ENTFL A E+LL++S+R+ GL + E + F+GS FR L +TD ++G +I +F+L+H+ + DK ECLLL++RKLY+ G C DN D+L N E+L+PGHL +KE+ E +R + ++ R + SK + + D K++DR+G++ G G+ FLSTGNI S +GLDLMQVSG+TIVAER+NFLRY +HFRSVHRGQFF MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A T +P S++ LL++LG +P+G G +GDG H +P+ LDGRV+GG AA+LR++KV A V PTLEV L+P G GPYPGLFL TG AR+ RPVLH A+GK E IGPMEQ FM+IACLA+DVR G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP HSL PHR DNK+Y++ PQAAI QT RH +Y+MD+YP GTNAVVAV+SYTG+DMEDAMILNKS++ERGFGH SV KT VD+KD A + S G+ R++F N P + G + D+ L+ +LG DGLP VG+WV+ GDP+YCVVD+LTG+ GKHKE EKAC++ VR LG+ K ++R VSITLR RNPV+GDKFSSRHGQKGV+SILWP DMPF+E+G+SPDVIINPHAFPSRMTIGMLIESMAGKSGA+HG FQDATPF+FHE D++ +D+FGEQL++AG++YYGSEPLYSGV+G +MH D++IG+VYYQRLRHMVSDK Q RATG VN LTRQPIKGRK GG+RLGEMERD+LLSHG AFLLHDRL+NCSD+HVA+ C CG LLS + + +V TAG SA A AR +R C R G + E V + +PYVFRYLANELAGM IK+T+
Sbjct: 2 GAAAESSKTPKKSREKVVIKETCPSFRRGHAPSFSDVKRLRTLSLPHVGSFDYFLERGLSEGIKDIEPFEIDLVDPKKSGSKKNKEVQTIKMWVENVRVDRPVSASGGSHSKLGGRLTPRECRELGLMYSGPMHGEICFQINHRQINDDGSISEIENSIQRIPKKFGDMPIMVMSKACHLHGKNPEQLIQMKEEQNEFGGYFIVNGIERCVRLLQIPRRNHPTAIQRSNYKSRGPTYTDLGVAIRCARHNEDQTSITNTVHYLTTGGASLKFTARKQEFLIPIILILRALSGTKYGLGGVSDEELYNRILQGDEENTFLKARAELLLQDSQRFQGLSTPNECVEFIGSRFRMLSMKADSSTDEDIGHYIIKKFILIHIPEYGDKLECLLLLIRKLYSFAAGDCGVDNADSLQNQEILMPGHLVCSFVKEKFEEMFMAIRIGMLKEMRQDFSKILGNIQDTSTFSKIVDRYGNLAGGGIGKKVQHFLSTGNIISSSGLDLMQVSGYTIVAERLNFLRYCAHFRSVHRGQFFLEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMALKSIPMTYPAPLSGDNLQSLDDLLIKLGASPSGAGGISGDGRGPSIHTHVPICLDGRVIGGASAKRCKSIAAQLRQMKVEDNA------TVPPTLEVALIPKGVKG-GPYPGLFLFTGAARLVRPVLHRASGKEEMIGPMEQPFMDIACLAEDVREGITTHQELDPMNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PHRTDNKLYRLQNPQAAIAQTARHGKYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSAYERGFGHASVYKTMKVDIKDEAERAGSDTKGDKPRMKFGNKTVRRAKDPSAAGGIG--TTDEVLYPNLGEDGLPEVGTWVDEGDPIYCVVDELTGRTRPGKHKEKEKACIQQVRLLGQPSASKDKVNRDDIVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQTDMPFSESGISPDVIINPHAFPSRMTIGMLIESMAGKSGAMHGMFQDATPFSFHESGDKIAVDYFGEQLQSAGYSYYGSEPLYSGVSGCLMHADLYIGVVYYQRLRHMVSDKYQARATGQVNALTRQPIKGRKKGGGIRLGEMERDSLLSHGTAFLLHDRLLNCSDKHVAYACRRCGDLLSPTTEKSSVLTAGQSALQAMSGAR-------------LRVFCRNPMCRDKSEREGAND--EMVEPIVLPYVFRYLANELAGMNIKMTM 1242
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: A0A6U3PLE0_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PLE0_9STRA) HSP 1 Score: 1236 bits (3198), Expect = 0.000e+0 Identity = 685/1289 (53.14%), Postives = 858/1289 (66.56%), Query Frame = 2
Query: 170 PSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEV-------GEGG---PV---------LKIWVEGMAVGYPGKKNEESASSKLHPRECRERGLTYQGVLHVDLCYQ-------------VGSGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCAR--KDQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKAL--------------------------------RDT----------TDREIHERLLQGDRENTFLAAHVEVLLRESKRWGLHSRMESLAFLGSTFRTLMSATSKTTDVELGKKVIDRFVLVHLTRHADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSV----VGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTCR----------SPSSIESLLVRLGVAPAGTGA--GDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVWVDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVA---GKLASPGEVARLRFCNTAPE--STGAVRGRRRDDK------LHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKTPLSR-----------VSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEK-DRV-IDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGERVVAVAMPYVFRYLANELAGMGIKVTL 3688
PSF + + S K RSL APHV+S+N+FL EGL A+ D+ PL +++ EG P+ +K W E + + P K E S +L+PRECRE GL Y G + D CYQ V G + R RR G+ P+MV S C+L +L + REE E GG+FIV+GIER +RLLQ+P+RN+P AI R+ ++NRG Y+ G+ +RC+R +DQ+++T TLHY++TGG+TL+F V KQEFLVPVV++L+AL R+T TD EI+ R++QGD NTFL A E+LL++++++ S +E LA+LGS FR L + + +D+++G +I RF+L+HL +A KQE LLLMLRKLYA G C DN D+L N E+LLPGHL ++KE+ E L +R + ++ R N +K + + G+ +DR + +G+ ++TFLSTGNI S +GLDLMQVSG+TIVAER+N+LRY +HFRSVHRGQFF MKTT+VRKLLP+ WGFLCPVHTPDG PCGLL+HLA C S + ++ LL+ LGV P G G DG + H LPV LDGRV+GG LR LKVA V +LEV +P G GPYPGL+L T AR+ RPVLH +TG AE IGPMEQ F++IACL D+R G+TTH+ELDPTNMLSL++SLTPFSDYNQSPRNMYQCQMGKQTMGTP HSL PHR DNK+Y++ PQA +VQT RH EY+MD+YP GTNAVVAV+SYTG+DMEDAMILNKSSFERGFGH SV KT VDL++ A G + GE +R++F N + ++G+ G L+ ++G DGLP VG+WV+ GDPLYCV+D+LTG KHKE E ACV++VR LG T R VSITLR RNPV+GDKFSSRHGQKGV+SILWP EDMPF+E+G+SPDVIINPHAFPSRMTIGMLIESMAGKSGA+HG FQDATPF+FHE D++ ID+FGEQL+AAG+ YYGSEPLYSGV+G +MH D++IG+V+YQRLRHMVSDK QVRATG VNQLTRQPIKGRK GG+RLGEMERD+LLSHG AFLLHDRL+NCSDRHV++ C CG LLS + R TV +AG S A A AR V R C AR G + + V + +PYV+RYLANELAGM IK+TL
Sbjct: 13 PSFQKSHLHSNEYHSKIRSLSAPHVESFNYFLEEGLRRAINDIVPLEVDMIDPKAKKKEGSAEHPLKEAKGDFDSIKFWFERVKIAPPTKMTE-SGMKRLYPRECREMGLMYSGTMIGDFCYQFVSRNKTKSGVREVVEGKVNRIPRRFGEVPIMVMSKSCNLSNKKPKELVKLREEQSEFGGYFIVKGIERCVRLLQIPRRNHPTAIQRSNYRNRGNTYTDLGVAIRCSRYNEDQSSITNTLHYLTTGGATLKFMVRKQEFLVPVVLVLRALGVEGGRELDSNVDYLQNGDDLSEDEDSGEEKKRETIGPRRGTRCFTDEEIYHRVVQGDETNTFLKARAELLLQDARKFSQSSPVECLAYLGSRFRPLSNKPNSCSDIDVGHYMIQRFILIHLPSYASKQETLLLMLRKLYAFAAGDCGVDNADSLQNQEILLPGHLISNMIKEKFEESLMDLRLQLLKEMRINFAKLIENSQKEMFWGRTVDRSIGLSSGGIGKKVATFLSTGNIISSSGLDLMQVSGYTIVAERLNWLRYCAHFRSVHRGQFFMEMKTTSVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKCSILSAPARTETSNADLDELLISLGVVPCGVGGVDSDGRCASTHLSLPVCLDGRVIGGASSKVCRLIGTRLRCLKVA------EKPCVPASLEVAFIPPGIVG-GPYPGLYLFTSAARLVRPVLHRSTGCAELIGPMEQPFLDIACLPQDIREGITTHQELDPTNMLSLISSLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PHRTDNKLYRLQNPQAPVVQTSRHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSFERGFGHASVYKTMQVDLREEAERRGSSTASGEKSRVKFGNKTIKKFASGSAAGSSSKGSSITEGFLYPNIGEDGLPEVGTWVKEGDPLYCVIDELTGADFAAKHKEKESACVQSVRLLGEHISHSTTTQRQKMAPSQQDQKVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQEDMPFSESGISPDVIINPHAFPSRMTIGMLIESMAGKSGAMHGLFQDATPFSFHETGDKLAIDYFGEQLQAAGYNYYGSEPLYSGVSGCLMHADLYIGVVFYQRLRHMVSDKYQVRATGAVNQLTRQPIKGRKKGGGIRLGEMERDSLLSHGTAFLLHDRLLNCSDRHVSYACTRCGDLLSPATERSTVLSAGQSVAEATSKAR----LRVY-----CRNSACRNQAAREGAND--DSVEPIVLPYVYRYLANELAGMNIKMTL 1281
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA) HSP 1 Score: 1229 bits (3180), Expect = 0.000e+0 Identity = 678/1289 (52.60%), Postives = 847/1289 (65.71%), Query Frame = 2
Query: 110 DGALRQQRVTKGSSRQPVTGPSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEV---------GEGGPV------LKIWVEGMAVGYPGKKNEESASSKLHPRECRERGLTYQGVLHVDLCYQV------GS---GPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCARK--DQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALRD-------------TTDREIHERLLQGDRENTFLAAHVEVLLRESKRWG-LHSRMESLAFLGSTFRTLMSATSKTTDVELGKKVIDRFVLVHLTRHADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSV------VGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTCRSPS-----------SIESLLVRLGVAPAGTGA--GDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVWVDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVAGKLASPGE------VARLRFCNTA--PESTGAVRG-------------RRRDDKLHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALG--------------REGIDKTPLSRVSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHE-KDRV-IDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGERVVAVAMPYVFRYLANELAGMGIKVTL 3688
D + + T S R+ T PSF +PS+ AE+ R++ APHV+S+++FL GL AV D+ P ++V G V ++ WVE + P K +++L PRECRE +TY G + D CYQ GS G + R +R GD P+M S CHL+G +L R +EE E GG+FIV GIER +R+LQ+P+RN+P AI R ++K RG Y+ G+ +R AR D +++T T+HY++TGG++LRF KQEFL+PVV++L+AL TD E++ R+++GD NTFL A E+LL++++R+ L E LA+LG+ FR L T+DV++G+ +IDRFVL+HL H+DK E LLL+LRKLY+ G C DN D+ N E+LLPGHL +KE+ E L+ VR + ++ R + ++ V D ++ +++DR+ + +G+ + FLSTGNI S TGLDLMQVSG+TI+AER+NFLRY +HFRSVHRGQFF M+TTAVRKLLP+ WGFLCPVHTPDG PCGLL+HLA C S ++ LL+ +GV P GTG GDG + LPV LDGRVVGG A LR LKVA V PTLEV +P PYPGL+L TG AR+ RPVLH TG+ E IGPMEQ FM+IACL +DVR G+TTH ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP HSL P+R DNK+Y++ PQA +VQT RH + MD+YP GTNAVVAV+SYTG+DMEDAMILNKSS+ERGFGH SV KT VDL+D A + + G ARL+F N PE + LH +L DGLP+ G WV GD LYCVVD LTGK VG+HKE EKACV+ VR LG R P ++S+TLRF RNPV+GDKFSSRHGQKGVMSILWP DMPF+E+G+SPDVIINPHAFPSRMTIGMLIESMAGK+GALHG +QDATPF+FHE D++ +D+FGEQL+AAG++YYGSEPLYSGV+G +M D+++G+VYYQRLRHMVSDK QVRATG VN +TRQPIKGRK GGVRLGEMERD+LLSHGAAFLL DRL+NCSDRHVA C CG LL + R +V +AG SAA A AR + C A A G+ + V +A+PYVFRYLANELAGM IK+TL
Sbjct: 21 DARMAKPSSTSKSPRE--TCPSFARGHLPSEEQAERYRAISAPHVESFDYFLTTGLRAAVSDVVPNELDVVDPREKREMGAASAVKEDVDCVRFWVENARISLPSKIAISGGAARLTPRECREMAMTYAGGMTADFCYQFIDRRADGSEVEGKVSRCNKRFGDMPIMTMSRACHLRGKSPEKLVRMKEEHNEFGGYFIVNGIERCVRILQIPRRNHPTAIQRGSYKKRGPTYTDLGVAVRSARHCGDCSSITNTVHYLTTGGASLRFPARKQEFLIPVVLLLRALSGXXXXXXXXXXXXXVTDEELYRRIVRGDSTNTFLRARAELLLQDARRFSDLADPSECLAYLGARFRMLSGRADSTSDVDVGRYMIDRFVLIHLPNHSDKLEYLLLLLRKLYSFAAGECGVDNADSFQNQEILLPGHLICHYVKEKFEESLQSVRLGLLKEMRVDFARAYSSVKDSRWWSRMVDRYAGIGGNASSIGKKVQHFLSTGNIVSSTGLDLMQVSGYTIIAERLNFLRYCAHFRSVHRGQFFMEMRTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKCEVMSYPAETMGGKLQDLDELLIGMGVTPCGTGGAGGDGRGTPDRGHLPVCLDGRVVGGAPARLCKSIAIHLRELKVAEPE-----PIVPPTLEVAHIPSTGSDGEPYPGLYLFTGSARVVRPVLHRRTGRTERIGPMEQPFMDIACLREDVREGITTHMELDPNNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PYRPDNKLYRLQNPQAPVVQTARHGAFNMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTMTVDLRDKAEHMGAKGGGCDGSGEARLKFSNILKKPEXXXXXXXXXXXXXXXXXKVEKNAAPWLHRTLDEDGLPMPGEWVSEGDALYCVVDTLTGKDNVGRHKEKEKACVQCVRKLGSASAGQSMNSKSGGRGSSSAVPDEKISLTLRFPRNPVIGDKFSSRHGQKGVMSILWPQVDMPFSESGISPDVIINPHAFPSRMTIGMLIESMAGKAGALHGIYQDATPFSFHETSDKLAVDYFGEQLQAAGYSYYGSEPLYSGVSGCIMQADLYLGVVYYQRLRHMVSDKYQVRATGSVNAVTRQPIKGRKQGGGVRLGEMERDSLLSHGAAFLLLDRLVNCSDRHVARACRRCGDLLGPTTERSSVLSAGQSAAEATNRARLR-----------VYCRNPRCREATAEGADD-DAVEPIALPYVFRYLANELAGMNIKMTL 1289
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: A0A5D6YCW8_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCW8_9STRA) HSP 1 Score: 1215 bits (3143), Expect = 0.000e+0 Identity = 661/1197 (55.22%), Postives = 822/1197 (68.67%), Query Frame = 2
Query: 158 PVTGPSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEVGEGGPVLKIWVEGMAVGYPGKKNEESASSKLHPRECRERGLTYQGVLHVDLCYQ-VGSGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCARKDQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALRDTTDREIHERLLQGDRENTFLAAHVEVLLRESKRWGLHSRMESLAFLGSTFRTLM-SATSKTTDVELGKKVIDRFVLVHLTR----HADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSVVGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTCRSPS--------------SIESLLVRLGVAPAGTGAGDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVWVDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVAGKLASPGEVARLRFCNTAPESTGAVRGRRRDDKLHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKTPLSRVSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEKDRVIDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGERVVAVAMPYVFRYLANELAGMGIKVTL 3688
P T PS + S P K T EK + LV+PH+DS+NFFL EGL AV D+ + +E+ + +W+E VG+P +N+ S KL P ECR+RG++Y L V L GS + R QR GD P+MV S RCHL GL +L ++REEA EMGG+FI G ER +RLLQ+P+R++ A+ R F NRG Y+ + M+C R+DQ+ VTVT HY+ G +T+RF V KQEF++PV ++LKAL +DREI+ER+L+G+ ENT+LAA VE++LRE+K++ L+SR E+LA+LG FR +M + T++V++G +++D F+ VH+ + A K E L LMLRKLYA +G +EDN D++ NHELLLPGHL+ MILKE+++ L +R I +DA S V D ++ K+ DR ++ GQ M+ FL+TGN+ S +GLDLMQV+G+TIVAE++N+ RY SHFRSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDG+PCGLLNHLA C S + L LG+ P +G DG+ +P+++LPVML+G+V+GG A AR A LR+LK A A A V +EV L+ GG YPGL+L+T ARM RPV L T + E+IGPMEQ FM+IA ADDVRP TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQCQM KQTMGTPAHSL HR DNKMY++ PQ IVQ R EYQ+D+YP GTNAVVAVISYTGYDMEDAMILNKSS+ERGF H SV K VD+ GK G A+ F N P S ++ SL DG P +G V GDPL C +D+ TG+ KHKESE A VE + +G + ++ I LRF RNP +GDKFSSRHGQKGVMSILWP DMPF+E+GMSPD+IINPHAFPSRMTIGMLIESMA K+GAL G + DATPF F EKDRVID+FG QL+ G+ Y GSEPLYSG++GTVMH DI++G+VYYQRLRHMVSDKSQVRATGP+N LTRQP+KGRK GG+R GEMERD+LL+HG AFLL DRLMNCSD+H+A VC +CGSLLS + +R +V TAG A A+ A+ C C G AVAMPYVFRYLANELA M IK++L
Sbjct: 22 PATNPSSSSRSCPPK-TNEKLQKLVSPHLDSFNFFLTEGLDLAVADLAKVPVEI-PNQHQMTLWIESAQVGFPTSENQISGERKLFPSECRQRGISYTAPLVVTLARSFAGSAAVERIQRVVGDIPIMVRSKRCHLSGLSPPELVKRREEANEMGGYFICNGNERCVRLLQLPRRHHIMAVRRGAFANRGDLYTELAVFMKCVRRDQSAVTVTCHYLEDGNATVRFGVKKQEFMIPVGLVLKALYPLSDREIYERVLRGEHENTYLAARVELILREAKKFSLYSRDEALAYLGKHFRHVMPNVYEATSNVDVGSRMLDEFLFVHVPKGEKGRAQKVELLCLMLRKLYAFAKGDAREDNADSVMNHELLLPGHLYLMILKEKLQEQLAALRLNILKDATGTGSAKRTVVLDQVFLRKMWDRTPNI-GQAMTYFLNTGNLRSSSGLDLMQVAGYTIVAEKLNYYRYFSHFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECELVSHPAHAADDFLAHELKVARFLATLGMIPT-SGYADGALVVPYSYLPVMLNGKVLGGAPAAVCARLEAALRQLKSADDAAERAAHGVVANMEVCLILPTLGGV--YPGLYLSTDAARMSRPVRQLDTQRVEYIGPMEQVFMDIAVTADDVRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQMAKQTMGTPAHSLV-HRADNKMYRIQSPQVPIVQNERLREYQLDEYPLGTNAVVAVISYTGYDMEDAMILNKSSYERGFAHASVYKQITVDI-GADGKQGGAG-AAKKYFSNVQPGS---------GEQCATSLDRDGFPHIGQVVNYGDPLACWIDETTGQPQFQKHKESEPAIVEQINMVG-SASQASEHTKAGIKLRFCRNPTIGDKFSSRHGQKGVMSILWPQADMPFSESGMSPDIIINPHAFPSRMTIGMLIESMAAKAGALKGKYMDATPFQFSEKDRVIDYFGAQLKEHGYNYMGSEPLYSGISGTVMHADIYMGVVYYQRLRHMVSDKSQVRATGPMNSLTRQPVKGRKKGGGIRFGEMERDSLLAHGCAFLLQDRLMNCSDKHIATVCTNCGSLLSNATQRASVETAGQGEVAVAIKAKSQ-----------WYCQVCR----------DGAHCQAVAMPYVFRYLANELAAMNIKMSL 1177
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: A0A8K1FE15_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE15_PYTOL) HSP 1 Score: 1203 bits (3113), Expect = 0.000e+0 Identity = 646/1197 (53.97%), Postives = 826/1197 (69.01%), Query Frame = 2
Query: 158 PVTGPSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEVGEGGPVLKIWVEGMAVGYPGKKNEESASSKLHPRECRERGLTYQGVLHVDLCYQ-VGSGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCARKDQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALRDTTDREIHERLLQGDRENTFLAAHVEVLLRESKRWGLHSRMESLAFLGSTFRTLMSATSKT-TDVELGKKVIDRFVLVHLTR----HADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSVVGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTCRSPS--------------SIESLLVRLGVAPAGTGAGDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVWVDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVAGKLASPGEVARLRFCNTAPESTGAVRGRRRDDKLHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKTPLSRVSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEKDRVIDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGERVVAVAMPYVFRYLANELAGMGIKVTL 3688
P T PS + S P+K T EK ++LV+PHVDS+N+F+ EGL AV D+P +++V P + +W+E +GYP +N+ + KL+P ECR+RG++Y L V L VGS + R QR GD P+MV S RCHL GL +L + REEA EMGG+FI G ER +RLLQ+P+R++ A+ R F NRG Y+ + M+C ++DQ+ VTVT+HY+ G +TLRF V KQEF++PV ++LKAL TDREI+ER+L+G+ ENT+L+A E++LRE+K++ ++SR E+LA+LG FR +M ++ ++VE+G K++D ++ VH+ + K E + LMLRKLYA +G +EDN D++ NHELLLPGHL+ MILKE++++ L VR I +D + + VM D ++ K+ DR ++ GQ M FL+TGN+ S +GLDL+Q++G+TIVAE++N+ RY SH+RSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDG+PCGLLNHLA C+ S + L LG+ P +G DG+ +P+++LP+ML+G+V+GG R A LR +K A A V LEV L+ GG +PGL+L+ ARM RPV + T + E+IGPMEQ FM+IAC D+RP TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQCQM KQTMGTPAHS+ HR DNKMY++ PQ IVQ R EYQ+D+YP GTNAVVAVISYTGYDMEDAMILNKSS+ERGFGH SV K VD+ GK + + ++ F N + +G + D DG P +G V GDPL C +D+ TG+ KHKE+E A +E + +G + ++ I LRF RNPV+GDKFSSRHGQKGVMSILWP E+MPFTE+GMSPDVIINPHAFPSRMTIGMLIESMA K+GAL G + DATPF F EKDRVID+FG+QLR G+ Y GSEPLYSG++GTVMH DI+IG+VYYQRLRHMVSDKSQVRATG VN LTRQP+KGRK GG+R GEMERD+LL+HG AFLL DRLMNCSD+H+A VC +CGSLLS + +R TV TAG A A+ ++ C C GE AVAMPYVFRYLANELA M IK++L
Sbjct: 31 PATNPSSSSRSCPTK-TNEKLQNLVSPHVDSFNYFITEGLDLAVADIPKAIIDV-PNQPQMALWIESAQIGYPTSENQITGERKLYPSECRQRGISYTAPLVVTLARSFVGSNNVERIQRVVGDIPIMVRSKRCHLYGLSPPELVQAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFANRGALYTELAVFMKCVKRDQSAVTVTMHYLEDGNATLRFGVRKQEFMIPVGLVLKALYPLTDREIYERVLRGEHENTYLSARAELILREAKKFSIYSRDEALAYLGKHFRHVMPYVYESMSNVEVGSKMLDDYLFVHIPKGEKGRTQKVELICLMLRKLYAFAKGDIREDNSDSVMNHELLLPGHLYNMILKEKLQDQLAMVRANIVKDMQTSKRAVVM---DQVFIRKMWDRTTNI-GQAMLYFLNTGNLRSSSGLDLLQIAGYTIVAEKLNYYRYFSHYRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVSYPAHNADDYLQEELKLARFLTSLGMIPT-SGYTDGALVVPYHYLPIMLNGKVLGGAPAEVCKRIAEVLRHVKSAESADERKEHGVVQNLEVCLIVPTLGGC--FPGLYLSADAARMTRPVKQMDTQRIEYIGPMEQVFMDIACTKADIRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQMAKQTMGTPAHSIV-HRTDNKMYRIQSPQIPIVQNERLREYQLDEYPLGTNAVVAVISYTGYDMEDAMILNKSSYERGFGHASVYKQIQVDI-GTEGKQGN--KASKQYFSNLKADGSGEFCTAKLDR--------DGFPHIGQVVNQGDPLACWIDETTGEAHYQKHKETEPAIIEQINMIGSSS-QASEFTKAGIKLRFCRNPVIGDKFSSRHGQKGVMSILWPQENMPFTESGMSPDVIINPHAFPSRMTIGMLIESMAAKAGALKGKYMDATPFQFSEKDRVIDYFGQQLREHGYNYMGSEPLYSGISGTVMHADIYIGVVYYQRLRHMVSDKSQVRATGKVNGLTRQPVKGRKKGGGIRFGEMERDSLLAHGCAFLLQDRLMNCSDKHIATVCTNCGSLLSNATQRATVETAGQGEVAIAMKSKTQ-----------WYCSVCQT----------GESCQAVAMPYVFRYLANELAAMNIKMSL 1183
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: A0A1E7FFI8_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFI8_9STRA) HSP 1 Score: 1196 bits (3093), Expect = 0.000e+0 Identity = 640/1223 (52.33%), Postives = 836/1223 (68.36%), Query Frame = 2
Query: 170 PSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEV--------------GEGGPVLKIWVEGMAVGYPGKKNEESASS-KLHPRECRERGLTYQGVLHVDLCYQV---------GSGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCARK--DQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALR-DTTDREIHERLLQGDRENTFLAAHVEVLLRE-SKRW-GLHSRMESLAFLGSTFRTLMSATSKTTDVELGKKVIDRFVLVHLTRHADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSV----VGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTC-----RSPSS------IESLLVRLGVAPAGTG--AGDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVWVDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVAGKLASPGEVARLRFCNTAPESTGAVRGRRRDDKL-HESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKTPLSRVSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEK--DRVIDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGE-RVVAVAMPYVFRYLANELAGMGIKVTL 3688
PSF +P+K E+ RSL PHV+S+N+FL GLA+ +K +PP +++ + +K W E + V K + S KL+P ECR+R LTY G + CY++ GS P + + G P+MVGS CHL+GL +L REE E GG+F++ G ER +R+LQVP+R++P AI RA++K RG Y+ G+ +RC R DQ+++T TLHY++TGG+TL+F V KQEFL+PV+++ +AL TD EI+ R++QG+ NTFL ++LL++ S R+ L++ E LAF+GS FR L T+DV++G +I+ ++L+H+ + DK ECLLL+LRKLYA G C DN D+L N ELL+PGHL ++KE+ E L+ +RQ + + R + + ++ + + +L+DR+ S +G+ ++TFLSTGN+TS++GLD MQ +G+TIVAER+NFLR+ SHFRSVHRG FF MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+HL+ C P S + LLV LGV P G G +G+G TS H PV +DGRVVG T AA+LR LKV + + TLEV L+P G+ PY GLFL TG ARM RPVL ATGK E IGPMEQ FM+IACL +D+R G+TTH+ELDPTNMLSL+A+LTPFSD NQSPRNMYQCQMGKQTMGTPAHSL P+R+DNK+Y++ PQA +VQT H EY+MD+YP GTNAVVAV+SYTG+DMED++I+NK S+ERGFGH SV KT +DL++ A A ++RF N RD +L H L DGLP +GS+V+ DPLYCV++++ K VGKHKESE+A V+++R G E D ++ SITLRF RNPV+GDKFSSRHGQKGV+SILWP +DMPF+E+G+SPD+IINPHAFPSRMTIGM++ESMAGK+GALHG FQDATPF+FHE +D+FGEQLRA+G+ YYGSEPLYSGV+G +M D++IG+VYYQRLRHMVSDK QVRATGPVN LTRQPIKGRK GG+RLGEMERD+LLSHG AFLL DRL+NCSD+H+A+ C CG LL + +R T+ ++G S A A+ +R I S + G + +V + +PYV+RYL NELA M IK+ +
Sbjct: 28 PSFRRGHLPNKDDVERLRSLTRPHVESFNYFLQSGLAKGIKAIPPAELDIVDLKRLREDRSKIDWDEITTVKFWFEDVRVVKSAKPSSAGRSDGKLYPTECRQRSLTYSGQILGKFCYEIIQRRNGVTKGSVPY-KMPKTFGVMPIMVGSNACHLEGLTPKELVDLREEDNEAGGYFLINGNERCVRMLQVPRRDHPLAIQRASYKKRGPTYTDLGVAIRCGRHTGDQSSITNTLHYLTTGGATLKFMVRKQEFLIPVILVARALTIGITDEEIYRRIVQGNESNTFLRTRAQLLLQDASVRFPNLNTPDECLAFIGSRFRRLSQKAESTSDVDIGHYIINEYILIHVPSYRDKLECLLLVLRKLYAFAAGDCGVDNADSLQNQELLMPGHLLSTMVKEKFEEVLQTIRQGMMIEMRKDFNVFSKRILESAFWSRLMDRYSSNASGGIGKRIATFLSTGNVTSISGLDQMQQAGYTIVAERLNFLRFNSHFRSVHRGSFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLSLECIPITHPDPKSGNGLTDFDGLLVSLGVIPCGAGGQSGEGRTSSSHAHFPVCVDGRVVGSASPNTCKTIAAQLRSLKVQMPS------QIPRTLEVALIPASEAGS-PYAGLFLFTGTARMVRPVLQRATGKTEMIGPMEQAFMDIACLDEDIREGITTHQELDPTNMLSLIANLTPFSDQNQSPRNMYQCQMGKQTMGTPAHSL-PYRVDNKLYRLQNPQAPVVQTSIHGEYKMDEYPNGTNAVVAVLSYTGFDMEDSVIINKCSYERGFGHASVYKTIEIDLQEEAKMAAQSSTRPQVRFANKV----------NRDGQLVHNKLEIDGLPEIGSYVDKDDPLYCVLNEVENKDRVGKHKESERAYVQSIRMFGSEKEDSQE-NKASITLRFNRNPVIGDKFSSRHGQKGVLSILWPQQDMPFSESGISPDIIINPHAFPSRMTIGMMVESMAGKAGALHGIFQDATPFSFHESGDQTSVDYFGEQLRASGYNYYGSEPLYSGVSGCLMQADLYIGVVYYQRLRHMVSDKYQVRATGPVNPLTRQPIKGRKKGGGIRLGEMERDSLLSHGCAFLLQDRLLNCSDKHIAYACCRCGDLLMPTTKRSTILSSGQSREEAMNKAK-------------LRLICRSPSCLKHVSEDGNDDQVEPIILPYVYRYLVNELAAMNIKLKM 1217
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Match: A0A2D4BW55_PYTIN (DNA-directed RNA polymerase subunit beta n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW55_PYTIN) HSP 1 Score: 1195 bits (3091), Expect = 0.000e+0 Identity = 645/1197 (53.88%), Postives = 819/1197 (68.42%), Query Frame = 2
Query: 158 PVTGPSFTLNSIPSKATAEKRRSLVAPHVDSYNFFLGEGLAEAVKDMPPLVMEVGEGGPVLKIWVEGMAVGYPGKKNEESASSKLHPRECRERGLTYQGVLHVDLCYQ-VGSGPIVRTQRRAGDCPVMVGSGRCHLQGLGSAQLCRKREEAGEMGGFFIVRGIERVIRLLQVPKRNYPHAISRATFKNRGQGYSTKGIIMRCARKDQTTVTVTLHYISTGGSTLRFSVLKQEFLVPVVIILKALRDTTDREIHERLLQGDRENTFLAAHVEVLLRESKRWGLHSRMESLAFLGSTFRTLMSAT-SKTTDVELGKKVIDRFVLVHLTR----HADKQECLLLMLRKLYALVQGRCQEDNQDALANHELLLPGHLFGMILKERVENWLEKVRQFIGRDARANASKTVMQVHDGKYVGKLLDRFGSVVGQGMSTFLSTGNITSVTGLDLMQVSGFTIVAERINFLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHLATTCRSPS--------------SIESLLVRLGVAPAGTGAGDGSTSLPHNFLPVMLDGRVVGGGREATLARAAAELRRLKVAGGAGGLAGVWVDPTLEVGLVPVMAGGAGPYPGLFLNTGGARMCRPVLHLATGKAEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSLTPHRIDNKMYKVLFPQAAIVQTRRHAEYQMDDYPQGTNAVVAVISYTGYDMEDAMILNKSSFERGFGHGSVLKTSVVDLKDVAGKLASPGEVARLRFCNTAPESTGAVRGRRRDDKLHESLGWDGLPVVGSWVESGDPLYCVVDQLTGKVTVGKHKESEKACVETVRALGREGIDKTPLSRVSITLRFQRNPVVGDKFSSRHGQKGVMSILWPTEDMPFTEAGMSPDVIINPHAFPSRMTIGMLIESMAGKSGALHGTFQDATPFAFHEKDRVIDHFGEQLRAAGFAYYGSEPLYSGVNGTVMHGDIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCASCGSLLSTSARRGTVATAGFSAAAAAVAAREGEGFDVSSGGGGIRCITCSVDPARAGGSSGGERVVAVAMPYVFRYLANELAGMGIKVTL 3688
P T PS S P + T EK + LV+PHVDS+NFFL EGL AV D+P +++EV + W+E +G+P +N+ + KL P ECR+RG++Y L V L GS + R QR GD P+MV S RCHL GL A+L + REEA EMGG+FI G ER +RLLQ+P+R++ A+ R F NRG Y+ + M+C ++DQT VTVT+HY+ G +TLRF V KQEF++PV ++LKAL TDREI+ER+L+G+ ENT+L+A VE++LRE+K++ ++SR E+LA+LG FR +M ++VE+G K++D ++ VH+ + A K E + LMLRKLYA +G +EDN D++ NHELLLPGHL+GMILKE+++ L R I + + + VM D ++ ++ +R ++ G M+ FL+TGN+ S +GLDL+QV+G+TIVAE++N+ RY SHFRSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDG+PCGLLNHLA C+ + + L LG+ P +G DG+ +P+++LPVML+G+V+GG + R A LR +K A V LEV L+ GG +PGL+L + ARM RPV + T + EWIGPMEQ FM+IAC D+RP TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQCQM KQTMGTPAHS+ HR DNKMY++ PQ IVQ R EYQ+D+YP GTNAVVAVISYTGYDMEDAMILNKS++ERGF H SV K VVD+ K S + F N +T + + D DG P +G V GDPL C VD+ TG+ + KHKESE A +E + +G + ++ I LRF RNPV+GDKFSSRHGQKGVMSILWP E+MPFTE+GMSPD+IINPHAFPSRMTIGMLIESMA K+GAL G + DATPF F EKDRVID+FGEQL+ G+ Y GSEPLYSG++GTVMH DI+IG+VYYQRLRHMVSDKSQVRATG +N LTRQP+KGRK GG+R GEMERD+LL+HG AFLL DRLMNCSD+H+A VC +CGSLLS + +R +V TAG A A+ ++ + F C C G+ AVAMPYVFRYLANELA M IK++L
Sbjct: 26 PATNPSSASRSCPLE-TNEKLQRLVSPHVDSFNFFLTEGLDLAVADIPKVLVEV-PNQQTMAFWIESAQIGFPTSENQITGERKLFPSECRQRGISYTAPLVVTLARSFAGSSNVERLQRVVGDIPIMVRSKRCHLNGLSPAELVQAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFANRGALYTELAVFMKCVKRDQTAVTVTMHYLEDGNATLRFGVRKQEFMIPVGLMLKALYPLTDREIYERVLRGEHENTYLSARVELILREAKKFSIYSRDEALAYLGKHFRHVMPYIYDSMSNVEVGSKMLDDYLFVHIPKGEKGRAQKVELVCLMLRKLYAFAKGDIREDNSDSVMNHELLLPGHLYGMILKEKLQEMLAATRSNILKAVQTSKKAVVM---DQAFMRQMWERTANI-GNAMTYFLNTGNLRSSSGLDLLQVAGYTIVAEKLNYYRYFSHFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVTHPPHQADDYLQQELKLARFLTSLGMIPT-SGYADGALVVPYHYLPVMLNGKVLGGAPVESCKRIAETLRLVKSAESPAERQEHGVVENLEVCLILPSLGGC--FPGLYLASDAARMTRPVKQMDTERIEWIGPMEQVFMDIACTQSDIRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQMAKQTMGTPAHSIV-HRTDNKMYRIQTPQIPIVQNERLREYQLDEYPLGTNAVVAVISYTGYDMEDAMILNKSAYERGFAHASVYKQIVVDIAGDGRKGGSSQN--KQXFSNVKANATNELYSAKLDR--------DGFPHIGQVVNQGDPLACWVDETTGEHHMQKHKESEPAIIEQINLIGSNS-QSSEFTKAGIKLRFCRNPVIGDKFSSRHGQKGVMSILWPQENMPFTESGMSPDIIINPHAFPSRMTIGMLIESMAAKTGALKGKYMDATPFQFSEKDRVIDYFGEQLKEXGYNYMGSEPLYSGISGTVMHADIYIGVVYYQRLRHMVSDKSQVRATGKMNALTRQPVKGRKKGGGIRFGEMERDSLLAHGCAFLLQDRLMNCSDKHIATVCTTCGSLLSNATQRASVETAGQGDVAIALKSKT-QWF----------CTVCQ----------SGDGCHAVAMPYVFRYLANELAAMNIKMSL 1179 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig874.3.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig874.3.7 >prot_A-nodosum_M_contig874.3.7 ID=prot_A-nodosum_M_contig874.3.7|Name=mRNA_A-nodosum_M_contig874.3.7|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1212bp MSSDVSSKVSKAGIVDGALRQQRVTKGSSRQPVTGPSFTLNSIPSKATAEback to top mRNA from alignment at A-nodosum_M_contig874:2198..35501+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig874.3.7 ID=mRNA_A-nodosum_M_contig874.3.7|Name=mRNA_A-nodosum_M_contig874.3.7|organism=Ascophyllum nodosum dioecious|type=mRNA|length=33304bp|location=Sequence derived from alignment at A-nodosum_M_contig874:2198..35501+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig874:2198..35501+ >mRNA_A-nodosum_M_contig874.3.7 ID=mRNA_A-nodosum_M_contig874.3.7|Name=mRNA_A-nodosum_M_contig874.3.7|organism=Ascophyllum nodosum dioecious|type=CDS|length=3636bp|location=Sequence derived from alignment at A-nodosum_M_contig874:2198..35501+ (Ascophyllum nodosum dioecious)back to top |