prot_A-nodosum_M_contig863.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig863.3.1
Unique Nameprot_A-nodosum_M_contig863.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length407
Homology
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BLAST of mRNA_A-nodosum_M_contig863.3.1 vs. uniprot
Match: D7FVI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI4_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 4.420e-9
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 0 
Query:   29 VPPVVPGDTAQ-SVKINPLVDNEDVLRHAMPFVG-NEGYLYVGGVSTHWRDAW--GYLPRETSLKAAVQTVPRISLAKDN----GCR-------------WDDITFMHVAAIGNLDVVRY 127
            +PP+ P  +AQ +++ NPL+D +D+LRH +PFV  NEGYL+V GV++ W  AW  G LP+ T L   V++  R++ A       G               WD+      AA G+L  ++Y
Sbjct:   17 MPPMPPPASAQDTLENNPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRLGTGGXXXXXXXXXASTPWVWDESVCRRAAAGGHLGALKY 136
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BLAST of mRNA_A-nodosum_M_contig863.3.1 vs. uniprot
Match: A0A6H5JXW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW6_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.890e-8
Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 0 
Query:   44 NPLVDNEDVLRHAMPFVG-NEGYLYVGGVSTHWRDAW--GYLPRETSLKAAVQTVPRISLAKDN---------GCR----WDDITFMHVAAIGNLDVVRY 127
            NPL+D +D+LRH +PFV  NEGYL+V GV++ W  AW  G LP+ T L   V++  R++ A            G      WD+      AA G+L  ++Y
Sbjct:   35 NPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYRAWVGGQLPKNTCLGNVVESASRLAWASSRLSTGGSTSGGASTPWVWDESVCRRAAAGGHLGALKY 134
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig863.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVI4_ECTSI4.420e-935.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXW6_9PHAE1.890e-838.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 106..405
e-value: 8.8E-21
score: 75.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 109..383
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 117..299
coord: 291..404
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 117..299
coord: 291..404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig863contigA-nodosum_M_contig863:28838..43824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig863.3.1mRNA_A-nodosum_M_contig863.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig863 28760..44380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig863.3.1 ID=prot_A-nodosum_M_contig863.3.1|Name=mRNA_A-nodosum_M_contig863.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=407bp
MAMKRSYSDDPKTIPSPNNKVCRLPVPDVPPVVPGDTAQSVKINPLVDNE
DVLRHAMPFVGNEGYLYVGGVSTHWRDAWGYLPRETSLKAAVQTVPRISL
AKDNGCRWDDITFMHVAAIGNLDVVRYARAQGCHWDDKACASASVEGHLA
VLKWLRSNGCPWGSDVCASAAIGGHLELLQWCRAQGCPWDSTTVKYAAWG
GHLDVCKWARANGCPWDSLACMWAASCGLLDALKWLKDDGYPWDDARAIA
IAASGQWEVIKWARANGCPWNEATCAEIASSGNLEILKWCRANGCPWNER
TPSWAARGGFLDILKWCREEGCPWDEWACASAASSGRLDILRWCRENGCP
WDEFTCSSAAGGGHMSVLEWCRANGCPWDERTCQKAAAGGHDAVLEWCRA
NGCPET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf