prot_A-nodosum_M_contig8629.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8629.14.1
Unique Nameprot_A-nodosum_M_contig8629.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length63
Homology
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BLAST of mRNA_A-nodosum_M_contig8629.14.1 vs. uniprot
Match: D7G172_ECTSI (TPX2_importin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G172_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.280e-10
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 0 
Query:    1 RLRTEASAAVHVPRPNVLTPAEREEAELAEMKKHQFKARSYNAGSIGIGREGAVFKPRHSDK 62
            + RTEA AA +  + +  +  EREEAELAEMKKHQFKA  YNA   G+G E  VF+P+HSDK
Sbjct:  168 KFRTEARAAGYS-KGHFPSREEREEAELAEMKKHQFKALPYNADGFGVGGEQGVFRPQHSDK 228
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8629.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G172_ECTSI2.280e-1058.06TPX2_importin domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8629contigA-nodosum_M_contig8629:23571..24253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8629.14.1mRNA_A-nodosum_M_contig8629.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8629 23571..24254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8629.14.1 ID=prot_A-nodosum_M_contig8629.14.1|Name=mRNA_A-nodosum_M_contig8629.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=63bp
RLRTEASAAVHVPRPNVLTPAEREEAELAEMKKHQFKARSYNAGSIGIGR
EGAVFKPRHSDKP
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