prot_A-nodosum_M_contig823.16.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: A0A835ZMS4_9STRA (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMS4_9STRA) HSP 1 Score: 171 bits (432), Expect = 3.460e-53 Identity = 83/98 (84.69%), Postives = 93/98 (94.90%), Query Frame = 0
Query: 11 DEEREEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNPS 108
D+EREEEF+SGPLSLLMQSVKNN QVLINVRNNHKLLARVKAFDRHCNMVLTDVKE+WT+ PK GKG+KKA V+KDRY+SKMFLRGDSV+LVL+NP+
Sbjct: 11 DKEREEEFASGPLSLLMQSVKNNNQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEMWTDVPKKGKGQKKAHPVNKDRYVSKMFLRGDSVILVLKNPN 108
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: A0A7S2XVF6_9STRA (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVF6_9STRA) HSP 1 Score: 170 bits (430), Expect = 6.970e-53 Identity = 84/108 (77.78%), Postives = 97/108 (89.81%), Query Frame = 0
Query: 1 MSAEDRIKGPDEEREEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNPS 108
MS D+ P+ E ++EF++GPLS+LMQSVK NTQVLINVRNNHKLLARVKAFDRHCNMVL +VKE+WTE PKTGKGKKKAK V+KDRYISKMFLRGDSV+LVL+NP+
Sbjct: 1 MSLADKQGMPEGENKDEFNTGPLSILMQSVKQNTQVLINVRNNHKLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKPVNKDRYISKMFLRGDSVILVLKNPN 108
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: A0A7S2GCZ6_9STRA (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCZ6_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.530e-50 Identity = 78/100 (78.00%), Postives = 94/100 (94.00%), Query Frame = 0
Query: 9 GPDEEREEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNPS 108
GP+ ++E+EF++GPLS+LM SVKNNTQVLINVRNNHKLLARVKAFDRHCNMVL +VKE+WT+ PK+GKG KK+K V+K+RYISKMFLRGDSV+LVL+NPS
Sbjct: 12 GPEGDKEQEFATGPLSVLMHSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLENVKEMWTDVPKSGKGAKKSKPVNKERYISKMFLRGDSVILVLKNPS 111
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: A0A6A4WKZ7_AMPAM (Small nuclear ribonucleoprotein Sm D2 n=5 Tax=Bilateria TaxID=33213 RepID=A0A6A4WKZ7_AMPAM) HSP 1 Score: 161 bits (408), Expect = 2.220e-49 Identity = 80/93 (86.02%), Postives = 87/93 (93.55%), Query Frame = 0
Query: 15 EEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNP 107
EEEF++GPLS+L QSVKNNTQVLIN RNN KLLARVKAFDRHCNMVL +VKE+WTE PKTGKGKKKAK V+KDRYISKMFLRGDSV+LVLRNP
Sbjct: 20 EEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLARVKAFDRHCNMVLENVKEMWTELPKTGKGKKKAKPVNKDRYISKMFLRGDSVILVLRNP 112
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: C1BS97_LEPSM (Small nuclear ribonucleoprotein Sm D2 n=8 Tax=Protostomia TaxID=33317 RepID=C1BS97_LEPSM) HSP 1 Score: 160 bits (405), Expect = 5.610e-49 Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0
Query: 15 EEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNP 107
EEEF++GPLS+L QSVKNNTQVLIN RNN KLL RVKAFDRHCNMVL VKE+WTE PKTGKGKKKAK V+KDRYISKMFLRGDSV+LVLRNP
Sbjct: 20 EEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLESVKEMWTEMPKTGKGKKKAKPVNKDRYISKMFLRGDSVILVLRNP 112
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: A0A2K1JZF8_PHYPA (Small nuclear ribonucleoprotein Sm D2 n=11 Tax=Embryophyta TaxID=3193 RepID=A0A2K1JZF8_PHYPA) HSP 1 Score: 159 bits (402), Expect = 1.290e-48 Identity = 80/107 (74.77%), Postives = 91/107 (85.05%), Query Frame = 0
Query: 1 MSAEDRIKGPDEEREEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNP 107
MSA + ++ EEEFS+GPLS+L SVKNNTQVLIN RNN KLL RVKAFDRHCNMVL +VKE+WTE PKTGKGKKKAK V+KDR+ISKMFLRGDSV++VLRNP
Sbjct: 1 MSARPMEEDTEKTEEEEFSTGPLSVLTMSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKPVNKDRFISKMFLRGDSVIIVLRNP 107
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: A0A2T7P031_POMCA (Small nuclear ribonucleoprotein Sm D2 n=12 Tax=Mollusca TaxID=6447 RepID=A0A2T7P031_POMCA) HSP 1 Score: 159 bits (402), Expect = 1.610e-48 Identity = 78/93 (83.87%), Postives = 87/93 (93.55%), Query Frame = 0
Query: 15 EEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNP 107
+EEF++GPLS+L QSVKNNTQVLIN RNN KLLARVKAFDRHCNMVL +VKE+WTE PKTGKGKKK+K V+KDRYISKMFLRGDSV+LVLRNP
Sbjct: 18 QEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKSKPVNKDRYISKMFLRGDSVILVLRNP 110
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: F0XYE5_AURAN (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYE5_AURAN) HSP 1 Score: 159 bits (401), Expect = 1.620e-48 Identity = 76/94 (80.85%), Postives = 89/94 (94.68%), Query Frame = 0
Query: 15 EEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNPS 108
E EF++GPLSLL+ S+K+N+QVLINVRNNHKLLARVKAFDRHCNMVL +VKE+WTE PKTGKGKKK+K V+K+RYISKMFLRGDSV+LVLRNP+
Sbjct: 9 ENEFATGPLSLLLHSMKSNSQVLINVRNNHKLLARVKAFDRHCNMVLENVKEVWTEIPKTGKGKKKSKPVNKERYISKMFLRGDSVILVLRNPN 102
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: D7FW42_ECTSI (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW42_ECTSI) HSP 1 Score: 158 bits (399), Expect = 1.680e-48 Identity = 76/82 (92.68%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 27 MQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNPS 108
MQSVKNNTQVLINVRNNHKLLAR+KAFDRHCNMVLTDVKE+WTEQPKTGKG+KKAKAV+KDRY+SKMFLRGDSVVLVLRNP+
Sbjct: 1 MQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGQKKAKAVNKDRYVSKMFLRGDSVVLVLRNPT 82
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Match: C3XTF6_BRAFL (Small nuclear ribonucleoprotein Sm D2 n=6 Tax=Bilateria TaxID=33213 RepID=C3XTF6_BRAFL) HSP 1 Score: 159 bits (401), Expect = 2.360e-48 Identity = 77/93 (82.80%), Postives = 87/93 (93.55%), Query Frame = 0
Query: 15 EEEFSSGPLSLLMQSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEIWTEQPKTGKGKKKAKAVDKDRYISKMFLRGDSVVLVLRNP 107
+EEF++GPLS+L QSVKNNTQVLIN RNN KLLARVKAFDRHCNMVL +VKE+WTE PKTGKGKKK+K ++KDRYISKMFLRGDSV+LVLRNP
Sbjct: 18 QEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKSKPINKDRYISKMFLRGDSVILVLRNP 110 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig823.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig823.16.1 ID=prot_A-nodosum_M_contig823.16.1|Name=mRNA_A-nodosum_M_contig823.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=109bpback to top |