prot_A-nodosum_M_contig823.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig823.4.1
Unique Nameprot_A-nodosum_M_contig823.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length242
Homology
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5JWN9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN9_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 1.750e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            M+VDSG++ +++DP L P + T M+D   +  P  I AAG + L G+A GT+   V D     R V   ++LVPGLG N+FS  +A  K V T+
Sbjct:  236 MVVDSGATDNYLDPGLTPGLRTHMRDVEYLRVPHTIVAAGQHVLKGVATGTIFGAVTDDNGNDRHVSFRVILVPGLGTNLFSVTLAMLKGVATL 329          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5JVF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF6_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 5.290e-10
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            M+VDSG++ +++DP L P +   M+D   +  P  I AAG + L G+  GT+   V D     R V   ++LVPGLG N+FS  +A  K + T+
Sbjct:  599 MVVDSGATDNYLDPGLTPGLRAHMRDVEHLRVPHTIVAAGQHVLKGVTTGTIFGAVTDDNGNDRHVSFRVILVPGLGTNLFSVTLAMLKGMATL 692          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 7.510e-10
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            M+VDSG++  ++ P L P +   M+D   +  P  I AAG + L G+A GT+   VRD     R V   ++LVPGLG N+FS  +A  K   T+
Sbjct:  254 MVVDSGATDKYLHPWLTPGLRAHMRDVEHLRVPHTIVAAGQHVLKGVATGTIFGAVRDDNGNDRHVSFRVILVPGLGTNLFSVTLAMLKGAATL 347          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 7.510e-10
Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            M+VDSG++ +++DP L P +   M+D   +  P  I AAG + L G+  GT+   V D     R V L ++LV GLG N+FS  +A  K V T+
Sbjct:  420 MVVDSGATDNYLDPGLTPGLRAHMRDVEHLRVPHTIVAAGQHVLKGVTTGTIFGAVTDDNGNDRHVSLRVILVSGLGTNLFSVTLAMLKGVATL 513          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5KYQ2_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ2_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.730e-9
Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            MLVDSG++ +++DP L P V   M+D   +  P+ I  AG + L G+  G L   V D     R V   +VLVPGLG N+FS   A    V ++
Sbjct:  420 MLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASL 513          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.840e-9
Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            MLVDSG++ +++DP L P V   M+D   +  P+ I  AG + L G+  G L   V D     R V   +VLVPGLG N+FS   A    V ++
Sbjct:  420 MLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASL 513          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 3.540e-9
Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            MLVDSG++ +++DP L P V   M+D   +  P+ I  AG + L G+  G L   V D     R V   ++LVPGLG N+FS   A    V ++
Sbjct:  420 MLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRRVSFRVMLVPGLGNNLFSVTAALSNGVASL 513          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 4.750e-9
Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            ML+DSG++ +++DP L P V   M+D   +  P+ I  AG + L G+  G L   V D     R V   +VLVPGLG N+FS   A    V ++
Sbjct:  420 MLMDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASL 513          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.110e-8
Identity = 36/94 (38.30%), Postives = 50/94 (53.19%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTI 94
            ML DSG++ +++DP L P V   M+D   +  P+ I  AG + L G+  G L   V D     R V   +VLVPGLG N+FS   A    V ++
Sbjct:  325 MLEDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASL 418          
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Match: A0A6H5K626_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K626_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.450e-8
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    1 MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQGTLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTII 95
            M+VD G++ +++DP L P +   M+D   +  P  I AAG + L G+  GT+   V D     R     +++VPGLG N+FS  +A  K V T++
Sbjct:  452 MVVDIGATDNYLDPGLTPGLRAHMRDVEHLRVPHTIVAAGQHVLKGVTTGTIFGAVTDDNGNDRHDSFRVIVVPGLGTNLFSVTLAMLKGVATLL 546          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig823.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JWN9_9PHAE1.750e-1141.49Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JVF6_9PHAE5.290e-1038.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K129_9PHAE7.510e-1039.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC00_9PHAE7.510e-1039.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYQ2_9PHAE1.730e-939.36CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5KJN3_9PHAE1.840e-939.36Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5J842_9PHAE3.540e-938.30Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJH6_9PHAE4.750e-938.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYB5_9PHAE1.110e-838.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K626_9PHAE1.450e-835.79Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig823contigA-nodosum_M_contig823:16866..17591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig823.4.1mRNA_A-nodosum_M_contig823.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig823 16803..19556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig823.4.1 ID=prot_A-nodosum_M_contig823.4.1|Name=mRNA_A-nodosum_M_contig823.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=242bp
MLVDSGSSKHFVDPKLVPRVETRMQDYTQIDPPMEIKAAGHNTLLGIAQG
TLLVVVRDTQDICRTVKLPIVLVPGLGQNIFSKAMAAQKDVKTIITKAGS
IVDLGLFSIQLTRSDNLDHLDLAISKESRRTDSACCAISGNAFSKETVLT
ASVPQKYIALSSAVTVSMNIDRRALQDGSLVVGHDNDSPTSEVRCCEKMT
LRRPWLLVLMKGVRVQIMWEMNTKHKTWKLRARIMLEMMRQ*
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