prot_A-nodosum_M_contig1220.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1220.4.1
Unique Nameprot_A-nodosum_M_contig1220.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length57
Homology
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.560e-15
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++EVRL
Sbjct:   39 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 95          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.520e-15
Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ST + RL++EVRL
Sbjct:   34 AVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNLGNSSTMKGRLQEEVRL 90          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.030e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++EVRL
Sbjct:   37 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 93          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.050e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++EVRL
Sbjct:  103 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 159          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 4.920e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++EVRL
Sbjct:  210 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 266          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 5.380e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++EVRL
Sbjct:   37 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 93          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 9.620e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++EVRL
Sbjct:  384 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 440          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 9.700e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++EVRL
Sbjct:  101 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 157          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 9.830e-14
Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKEVRL 57
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++EVRL
Sbjct:  380 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 436          
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 3.540e-13
Identity = 30/54 (55.56%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLRLRKE 54
            AV+DLG  E+  GLTFVCLSRAKRLVDL++EP+  +R+  +G++ T + RL++E
Sbjct:   37 AVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEE 90          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1220.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5KSF1_9PHAE2.560e-1557.89Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K214_9PHAE8.520e-1559.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCP5_9PHAE1.030e-1457.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH2_9PHAE1.050e-1457.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS2_9PHAE4.920e-1457.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN08_9PHAE5.380e-1457.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JFG8_9PHAE9.620e-1457.89Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4U7_9PHAE9.700e-1457.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8Y8_9PHAE9.830e-1457.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFN2_9PHAE3.540e-1355.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1220contigA-nodosum_M_contig1220:83306..83476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1220.4.1mRNA_A-nodosum_M_contig1220.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1220 83306..83476 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1220.4.1 ID=prot_A-nodosum_M_contig1220.4.1|Name=mRNA_A-nodosum_M_contig1220.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=57bp
AVVDLGKSESIAGLTFVCLSRAKRLVDLLIEPIPLERLSKIGDTSTFQLR
LRKEVRL
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