prot_A-nodosum_M_contig120.52.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig120.52.1
Unique Nameprot_A-nodosum_M_contig120.52.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length542
Homology
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.720e-103
Identity = 267/457 (58.42%), Postives = 286/457 (62.58%), Query Frame = 0
Query:   37 IPALEDKRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRSG----------------------SAQGGD-GPGSGGLA---GLEIEIGGPPSVGQDDEDAQEREDGVGETTLEQQAMDAAAAAAVAA--------AVQNPYGLSAHMSMAGMAMGYSPYVHMAAAXXXXXXXXXXXXXXXXSGEGIAAAAAPGAPVIGP------------------------------------SQMQAYGHVGFYGGYPGMLGMPYPFQAHAYPGMPGYGVQGMGGYPSLATGNSEHLVAS--LGMGGMAAMHMATQTMQXXXXXXXXXXXXXXXXXXXXXXXX------------------HIDLNQPHAIQ 403
            IP LEDKR KRGFSKRVTLRDLERYFEYPIE+VSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTA G DRQRLQ+QLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDA+TLLR+G                      + + GD G  +  LA   G+  E  GP  VG+    A    DG     +  QAM+ AAA             A Q+PYG+  HMSMAGM MGYSPYVHMAAAXXXXXXXXXXXXXXXX                                                      S M  YG    YGGYPGM+GMPYPFQAH YPGMPGYGV GMG YPSLA G  +  +AS   GM GMAAM +A Q+M  XXXXXXXXXXXXXXXXXXXXXXX                  HIDLNQPH +Q
Sbjct:   92 IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTGGXXXXXXXXXXXXXXXXXXXXXATEFGDLGNPTSPLAEAPGVPQEEAGPAGVGE----ASAGGDGAYGPDI--QAMEEAAAXXXXXXXXXXXXXAAQSPYGMPPHMSMAGMGMGYSPYVHMAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPMHGYGLHAMYGGYPGMMGMPYPFQAHGYPGMPGYGVPGMGSYPSLAAGGGDPTLASSSFGMSGMAAMQLAAQSMHQXXXXXXXXXXXXXXXXXXXXXXXXXXHPXXYHDPNHPQHQQHIDLNQPHEVQ 542          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 4.530e-71
Identity = 126/133 (94.74%), Postives = 129/133 (96.99%), Query Frame = 0
Query:   37 IPALEDKRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRSG 169
            IP LEDKR KRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTA G DRQRLQ+QLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDA+TLLR+G
Sbjct:   90 IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDAETLLRTG 222          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.260e-17
Identity = 54/154 (35.06%), Postives = 90/154 (58.44%), Query Frame = 0
Query:   18 GHQDYGVEGGVDGED-DEDGIPALEDKRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI-KYVELLARTAMGPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLLRSG 169
            G +  G +    G+D DE G+     ++  R   +R+TL  LE  +  P+   ++ +GVS T++K+LCR+YGI+RWP+RQIRS+ K + K+++  A+     D     +++  L  K+ ++ + A+ G +A +R +I   RP ELDAD L  SG
Sbjct:   67 GGEGMGSDDAASGDDVDEHGVKI---RQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGELDADQLFSSG 217          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 9.380e-17
Identity = 44/115 (38.26%), Postives = 76/115 (66.09%), Query Frame = 0
Query:   53 VTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYV-ELLARTAMGPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLL 166
            +TL  L+ ++  P+ E++K +G+S T++K++CRKYGI+RWP+RQIRS+NKS + + E +       +R  LQ QL  L  KK+L+ + A++G  + +R ++    PE+L+ D + 
Sbjct:   14 ITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEDAVF 128          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI)

HSP 1 Score: 89.0 bits (219), Expect = 1.440e-15
Identity = 41/115 (35.65%), Postives = 75/115 (65.22%), Query Frame = 0
Query:   53 VTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGPDRQ-RLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLL 166
            +TL  L+ Y+  P+ E++K +G+S T++K++CRK+GI+RWP+RQIRS+NK+I+ +     +   PD    L++Q+  L  K++L+ + A++G    +R +I    PE L  +++ 
Sbjct:   14 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSVNSPDEHAELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANPEHLQEESMF 128          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.590e-15
Identity = 40/116 (34.48%), Postives = 80/116 (68.97%), Query Frame = 0
Query:   52 RVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAM-GPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELDADTLL 166
            ++TL  L+ Y+  P+ E++K +G+S T++K++CRK+GI+RWP+RQIRS+NK+ + ++  A+ A+   +   ++ QL  L  KK+L+ + A++G  + +R ++    PE+L+ +++ 
Sbjct:   10 QITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAEIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEESVF 125          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: A0A2D4BXJ0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXJ0_PYTIN)

HSP 1 Score: 87.4 bits (215), Expect = 1.330e-14
Identity = 40/96 (41.67%), Postives = 66/96 (68.75%), Query Frame = 0
Query:   41 EDKRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGPDRQRLQDQLVSLHYKKQLI 136
            E  R K   +K +T+ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A GP+R + +DQ++SL  K+  +
Sbjct:  151 ESNRVKSLVTKHITIDELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAQGPERDKYRDQIISLKLKRDAV 246          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: G4ZYN2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZYN2_PHYSP)

HSP 1 Score: 84.0 bits (206), Expect = 1.760e-13
Identity = 43/120 (35.83%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   41 EDKRTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRKS---ILQMRP 157
            E  R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G +R++ +DQ+V+L  K++ +       +S + + S   +L  RP
Sbjct:  141 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESVIADPNKDSSMRPKTSPPSLLTPRP 260          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: A0A6A4YB88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YB88_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.800e-13
Identity = 44/130 (33.85%), Postives = 75/130 (57.69%), Query Frame = 0
Query:   44 RTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRK-SILQMRPEELDADTLLRSGSAQ 172
            R K   +K +++ +L  +F+ PI EV++  G+  T++K++CR+ GIKRWP+RQIRS+ KSI  +E    TA G +R++ + Q+ +L  K+  +        S  + K    + + ++LD      SGS Q
Sbjct:  145 RMKYHATKFISIEELREHFDQPIVEVARFFGICITLMKKVCRRNGIKRWPHRQIRSLTKSISSMEAAMMTATGAEREKYEGQIQTLKLKRDAVIADPNKEVSVSLTKCEFKEEKKDDLDETGSQSSGSPQ 274          
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Match: A0A6G0XXF4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXF4_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.260e-13
Identity = 44/130 (33.85%), Postives = 75/130 (57.69%), Query Frame = 0
Query:   44 RTKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAMGPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRK-SILQMRPEELDADTLLRSGSAQ 172
            R K   +K +++ +L  +F+ PI EV++  G+  T++K++CR+ GIKRWP+RQIRS+ KSI  +E    TA G +R++ + Q+ +L  K+  +        S  + K    + + ++LD    L S S Q
Sbjct:  145 RMKYHATKFISIEELREHFDQPIVEVARFFGICITLMKKVCRRNGIKRWPHRQIRSLTKSISSMEAAMMTATGAEREKYEGQIQTLKMKRDAVIADPNKEVSVSLSKCEFKEGKKDDLDETGSLSSDSGQ 274          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig120.52.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0H9_9PHAE1.720e-10358.42RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LJT6_ECTSI4.530e-7194.74Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A836CMG7_9STRA1.260e-1735.06RWP-RK domain-containing protein n=1 Tax=Tribonema... [more]
A0A835Z1M5_9STRA9.380e-1738.26Putative NIN-like transcription factor n=1 Tax=Tri... [more]
H6WBB7_VAULI1.440e-1535.65Putative NIN-like transcription factor n=1 Tax=Vau... [more]
A0A835YTG3_9STRA1.590e-1534.48Putative NIN-like transcription factor n=1 Tax=Tri... [more]
A0A2D4BXJ0_PYTIN1.330e-1441.67Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
G4ZYN2_PHYSP1.760e-1335.83Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6A4YB88_9STRA1.800e-1333.85Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6G0XXF4_9STRA2.260e-1333.85Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 404..424
NoneNo IPR availableCOILSCoilCoilcoord: 362..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..211
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 53..100
e-value: 5.5E-19
score: 67.9
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 35..120
score: 18.632887
IPR044607Transcription factor RKD-likePANTHERPTHR46373PROTEIN RKD4coord: 43..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig120contigA-nodosum_M_contig120:730087..752811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig120.52.1mRNA_A-nodosum_M_contig120.52.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig120 729030..752913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig120.52.1 ID=prot_A-nodosum_M_contig120.52.1|Name=mRNA_A-nodosum_M_contig120.52.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=542bp
MTAVAAVGLDEANRVAVGHQDYGVEGGVDGEDDEDGIPALEDKRTKRGFS
KRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSV
NKSIKYVELLARTAMGPDRQRLQDQLVSLHYKKQLICQAATTGASAKVRK
SILQMRPEELDADTLLRSGSAQGGDGPGSGGLAGLEIEIGGPPSVGQDDE
DAQEREDGVGETTLEQQAMDAAAAAAVAAAVQNPYGLSAHMSMAGMAMGY
SPYVHMAAAAQAQQQAATQHHHHQKSGEGIAAAAAPGAPVIGPSQMQAYG
HVGFYGGYPGMLGMPYPFQAHAYPGMPGYGVQGMGGYPSLATGNSEHLVA
SLGMGGMAAMHMATQTMQQQQQQQQLQQQQQQQQQRQQQQQQHIDLNQPH
AIQHQQLLQQHQQQQRQIQVQQQAVMADAVPVEVAVTESTSIAAAPGGAT
ANGEGAGEALEVGKDQGNAKQYTGDNITSGSARAGSDEGGDRGMSESVEG
DSREGASFNAVNEKDNFVAGAIAGGGGTGGNEKHGVDEASA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
IPR044607RKD-like