prot_A-nodosum_M_contig1197.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1197.11.1
Unique Nameprot_A-nodosum_M_contig1197.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length151
Homology
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BLAST of mRNA_A-nodosum_M_contig1197.11.1 vs. uniprot
Match: D7G7Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Y9_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 4.530e-17
Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 0 
Query:   15 GSLSAWLEPQRPCG-GKRRA----IVGRARDGXXXXXXXXXXXXXXEEDGDEDWMSTRLEGLDPNGAAKAKDGWTIRTKRNLTITDIALGAKRK 103
            G+LSAWLEP++P   GKR A    +  R  DG               EDG   WMS RLEGLDP GAA+AKD W+ R +RNLT TDIALGAKRK
Sbjct:  211 GTLSAWLEPRQPATRGKRTAHGTSVAEREPDGGFSGDEGGG------EDGGGRWMSDRLEGLDPTGAARAKDSWSDRERRNLTCTDIALGAKRK 298
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BLAST of mRNA_A-nodosum_M_contig1197.11.1 vs. uniprot
Match: A0A6H5KWK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 8.760e-16
Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:   15 GSLSAWLEPQRPCGGKRRAIVG-----RARDGXXXXXXXXXXXXXXEEDGDEDWMSTRLEGLDPNGAAKAKDGWTIRTKRNLTITDIALGAKRK 103
            G+LS WLEP +P    ++ + G     R  DG               E G   WMS RLEGLDP+GAA+AKD W+ R +RNLT TDIALGAKRK
Sbjct:  208 GTLSGWLEPHQPATSGKQTVRGTSVAERGSDGGFSGDKGGG------EYGSSKWMSDRLEGLDPSGAARAKDSWSDRERRNLTCTDIALGAKRK 295
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1197.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7Y9_ECTSI4.530e-1754.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWK6_9PHAE8.760e-1648.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1197contigA-nodosum_M_contig1197:148277..149394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1197.11.1mRNA_A-nodosum_M_contig1197.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1197 147951..149691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1197.11.1 ID=prot_A-nodosum_M_contig1197.11.1|Name=mRNA_A-nodosum_M_contig1197.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=151bp
MPRETNKAQSERDQGSLSAWLEPQRPCGGKRRAIVGRARDGRAADESPSK
EPPREEEDGDEDWMSTRLEGLDPNGAAKAKDGWTIRTKRNLTITDIALGA
KRKTQGGRGWKTTLGGGKVFVAPSQGRPALVATGQKAFKMSMSRRKKGAL
*
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