prot_A-nodosum_M_contig119.39.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig119.39.1
Unique Nameprot_A-nodosum_M_contig119.39.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length170
Homology
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BLAST of mRNA_A-nodosum_M_contig119.39.1 vs. uniprot
Match: D7FJF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJF0_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 6.810e-26
Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = 0 
Query:   14 WIYLISFADMVSDFTYFGELYESDDVIDVVAYVVLAFALFGLVSLLVSPPTMCGHAAGVILEDIPMTIVTTAIQARIVGAKVTEWSMEAQVSYIFSVFAIQQKLMYAGYAPYRRHQTRGGREKPRFCDVLLCS---IFVTLIA-----LALAWIAAAIIIF 166
            WI  +S AD++SDF YF ELY  ++V D VA+ VL FA+ GL+S L  P +  G A  +  ED P+ I+TTAIQA + GA V EW   A VSY+FS+FA+QQK+M  G     R       E+ R  ++  C    +FV  +A     + LAW  +A IIF
Sbjct:   17 WILALSVADILSDFLYFEELYTENNVPDGVAFAVLGFAIVGLMSFLSGPFSDIGTAVSISFEDFPIIIITTAIQAYLAGADVREWHAVAIVSYVFSMFAMQQKVMKLGLVKSIRDILNPRAEEERQAEIGPCYWWVVFVRSLAAVAFTVLLAWALSAFIIF 177
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig119.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJF0_ECTSI6.810e-2643.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig119contigA-nodosum_M_contig119:363788..364297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig119.39.1mRNA_A-nodosum_M_contig119.39.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig119 363245..379003 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig119.39.1 ID=prot_A-nodosum_M_contig119.39.1|Name=mRNA_A-nodosum_M_contig119.39.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=170bp
MTASTSSCTVATLWIYLISFADMVSDFTYFGELYESDDVIDVVAYVVLAF
ALFGLVSLLVSPPTMCGHAAGVILEDIPMTIVTTAIQARIVGAKVTEWSM
EAQVSYIFSVFAIQQKLMYAGYAPYRRHQTRGGREKPRFCDVLLCSIFVT
LIALALAWIAAAIIIFLDL*
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