prot_A-nodosum_M_contig1174.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1174.1.1
Unique Nameprot_A-nodosum_M_contig1174.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1725
Homology
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Match: D7FXJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ0_ECTSI)

HSP 1 Score: 1314 bits (3401), Expect = 0.000e+0
Identity = 854/1844 (46.31%), Postives = 1076/1844 (58.35%), Query Frame = 0
Query:    5 AEEAPLGFAGDVDG-TVSFRITRDAPRGFTVSRAERVPPXXXL-----------EDESLIGGGVILTGMSAGRTLVTWRAQEELGLWLEERGLDDDLEGGGLHLALEGAVPERGAVGIFRTENMDDRGAESPFFEVCVYTNAGVIYRVTLLRPTAFPGNKIPSVFTAMGSERACDVLKLP-RGGAIPSSGPCCWIKSELLVIGGNDGNVQCVSIVEGADGQVACLTEETLKEKGGWIPLYGGGGGNAKTVAISGFWQEQEKRAVILTLHTDWSLRVWTTT--PTGS-RRGGGLAQRMDVRQFLGATHQRQTAAMDEAGCYFSATAGQEESGQDKRFVIAAVAAEGGLPVHVVLELPNTGVGLSQRAILAAPNDTGPLVDACVDKDLAIWALWARPRGHA--EGARGGITSYGRDGATLEAVDNIDIDQWSSVQHEEEDTVFDDLLR-KHDWEGMIRLRSPDFASEVEGMRKYERRSRVACAAVDAIESFYLRRMFTSGRFGRRALCLALRDALPLLDAAGPLSSSSTSLEHLEALALKGIRQAAEQAYESLEEAGPIFENPVSDQTFQKALTTVHGQWKRLLEACVVWGRVEARPLGLAPDGRGEFGTPAVVRAGRVSCLFP---------------LSNQSPPMTGSGAPTRERVSPRTEDVTRWRLEILRGIAAEVPGAIEKASAEMVDET---------------VEPGAATAALRVFEAESALAREGTAGGVGDP-NHPNSFAEGAGRYRRKQLSVLKKVVEDLIKTPLGIDLADRVAVAVRMDTIEDFLSWVKSMSTELVPERYNPLDFRRGVRGTSSGIATASAFCAVRVFRERCAEARNLAMVFLLMLQQTQRTGLVDQLEVYIETQALPLALKCMNKYALAADVGSLRLRPRNDLEESSS-------------LGE-HPAMLEARKPWGCSVLEGMFLARRAMMQDYWQERAEEACSRRHLIEGLGGLPTLLANMCEDISPPCWKDLDNGGLAAFLQGCRQYRLGLPLVGLAVAWR----------RLADREDADAEVLMALGRGFVMSAEAVAHSGKRGSFEAACLLRKATSWFIKAEGSLEKSIRRGWMGG---KAQSLVEHYEVCLRELEEMRGRVKKAAGVAKGGK-----------------------DVLGESGALCALDLARLALSRDREMERAEGIRASELPPHQLAQQRARLCQLVFKHASEALKFDEAFNAICTNPEEQRREENIKALTQHMCESGRLGELCSLPLDEFPQN--MTPSVIVTSTLWKLASDSNVAELVQEGAVRQGRPITNYFDCLYAFFTVRGMFVQAAEAQDEFRR-------RLQDHPAGSTLPFAAAAQRARLAALNALAVASSS--GGDGSNGEGKAGLFPRRGDPGRRLDASGQPADIRTVSSLSRDAAVASAAIELAEARDPEGLEVFSGVPSMFSRRSSYNPAAVWNGCANGILWAQGSAVVLEGNMWRRRSRGEKTTVITGVSKVMEALLETGRYEQAVDIALRGFEHKPKAMYAAMDKIVITVTRACALAEDIAGGFSREGLPPLVRGVGPLKPRVSPEKATP-----------ASERTESLWLVLRQLLRLDSAACNFSYHAKAAKTLLEGMPAYRLPSWLEDSFLGRGGAL-DAPSNANAFPQQRPRPLLAPWKAFASSRNAGNAGGANPTALLDLYVFDGRLEDACLFLSRLLDTDDTVTDVTSFTQLTPTERGGTDWLPYASIDRLLALSEASLARKSLRGGVVANGGTVQDVQDDVSDGNKEGDFSHRDGLERALNTARARLVEYFKIAKALTDQAQARRRAQAAM-GSSLSLAASFMVTD 1724
            A+E+PLGFAGD+DG T SFR++       ++  A     XXX            +D  L+GGGV+L G+ AGRT+VTWRAQE  GLWLEERGLDDDLEGGGLHL L+G V   GAVG+F      D G +     VC YT+  V++RV L RP A PG+K  S  +AM + +   V KL  R G +   GP CWI  +LLV+GG DG++ CV+I EG DGQ A L EETL+ K GW PL  G G NA  VA++GFW+E+EK+AV+LTLHTDWS RVW T+   TG+ RRGGGL  R+D RQFLG+ H+RQTAA+D + C+ S  A      +++ FV+AAVAAEGGLPVH+VL +   G  L +R    AP++ GPLVDA V+    +W LW RPRG        GG++SYG +G T ++V +  ID+W   Q +EED V D+L R K  W G++ LR P       G R       VA  +V+ +ESFYLRRMFT+GRFGRR L  A+R+A+PL+  AGPLSS+STSL+ L+ LAL+G+R AAEQA+ +L+E     +      T Q+AL  VHG WKRLL ACV  GR EARPLGL P G   F TP VVRAGR +CL P               ++  S P  G G+ T +          R R+  LRG+AA VP A E+A   +V E+                      A  R FEAESALAREGTAGG+ D  N P    E  G Y+R+Q S L+KV + L+++  G  LA+  A  ++ D + D L+W +S+     P R  PL    GV G SSGIATA+AF  V++ +ER AEARN A+V +L+L+Q  R GL DQLE  I   ALP+ALKCMN+YAL+A+VGS  LR R      +S             +G+  PA + A KPWGC+ LEG+FL  R ++QDYW    E +   R L  GLGG+P+LLA MCE         LD+GGL +FL    QY+L LPLVGLAV W+              R +    VL ++ RGF+ SAEA A S   GS  +  LL +AT W++K+  +L   + R   GG   +A+S+VEH+E  L E+E +R  +++                                +  G  G + AL+LAR AL  +RE+  + G    +       Q++ARLCQLVFKHASEAL F EAF+A+C NP +Q+R+EN+ AL QHMCESGRLGELCSL L + P      PS +V S LW LA  S+V +LV  G   +GR   NY+DCLYAF+  RG  V AA AQDE R        R + H A STLPFAA AQRARLAALNAL+VA ++    D +     A + P  G+  RRLD  G+PA +RTV+ L R+A  A+ AI         GL V  G       R     A VW        W                 RGE+  V+       EAL   GRYE+A D+ L G  H+P+ M   MDK+V  + RAC   EDIA G+    LPPLVRGVGPLKPRV    A             A E   SLW VLRQLLRLDSA  NFSYH  A   LLEGMPA  LP W+EDS+LG G  L D P+NANAFP  +PR LLAPWKAF S R    A G +PT LLD+YV DGRLE+ACLFLSR+LDT + V D+ + T+L P + GGTD+LPYASIDRL ALSEASLAR            T Q          KEG +    GL  A  TA+ RLV Y K+AKA++DQAQ  R A+AA  G  +  A++FM+TD
Sbjct:   70 ADESPLGFAGDIDGGTSSFRLSSGQQPPPSLGNAGHGAXXXXXXXXXXXXXXSPQDRGLVGGGVLLEGVEAGRTVVTWRAQES-GLWLEERGLDDDLEGGGLHLQLQGGVSSAGAVGVF---GAGDGGGDQSSLAVCAYTDDRVVHRVLLQRPAAPPGDKAQSALSAMSAPQGRKVAKLGCREGGL---GPSCWINRDLLVVGGMDGSLHCVTIAEGIDGQTASLCEETLRVKTGWNPLAVGSGDNASAVAVTGFWREEEKQAVVLTLHTDWSFRVWVTSRASTGAKRRGGGLVSRVDARQFLGSPHERQTAAVDGSSCFLSPVAAVANP-EEENFVVAAVAAEGGLPVHIVLTISPRGGELVRRCEFEAPSEAGPLVDAHVNHKGIVWTLWDRPRGGGGVSSGCGGVSSYGENG-TFDSVHHQTIDEWLGSQ-QEEDAVLDELFRRKGGWPGLVALRCPPQGGGGRGTRA------VALDSVELMESFYLRRMFTAGRFGRRVLASAIREAVPLMHNAGPLSSNSTSLQDLQNLALEGVRNAAEQAFRTLDEENDKDDPLAMSPTAQQALRDVHGFWKRLLLACVEGGRAEARPLGLVPGGMETFVTPFVVRAGRTTCLMPRGDRRGGISMAVAVAVAGTSSPRQGQGSLTTDXXXXXXSSCDR-RVARLRGLAAGVPAAFEEA---LVAESGXXXXXXXXXXXXXXXXXXXXXAWFRGFEAESALAREGTAGGLADAENLPRGLGEEGG-YKREQASFLRKVSDVLLRSTTGACLAEAAAAVLQTDAVRDVLTWAESLKPAKEPPRSRPLGHGGGVCGCSSGIATAAAFGTVKLMKERSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPVALKCMNQYALSAEVGSHHLRVRGGTHPVASWRGGRSGWGGGGGIGDAQPASVAASKPWGCTALEGLFLDSRGVVQDYWAMSTEASTRGRQL--GLGGVPSLLAGMCEGTLRSHLTGLDSGGLVSFLHASEQYQLALPLVGLAVEWQWRMKVGXXXXXXXHRPEPHTAVLTSIARGFLYSAEAAARSEGGGSSSSGPLLDRATKWYLKSSQALRAQLLRPGGGGGHNQAESVVEHFEGALLEVERVREGLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETERELRGSAG----DQXXXXXXQRQARLCQLVFKHASEALCFREAFDAVCDNPIDQQRKENLAALVQHMCESGRLGELCSLSLADCPHGGGWHPSGVVDSALWPLARRSSVDDLVG-GPGGKGRSRVNYYDCLYAFYMARGEEVAAARAQDELRESPARSFDRWKPHSAASTLPFAAGAQRARLAALNALSVAGNAYPSSDDTAAATVASICPPAGE--RRLDGYGRPAGVRTVAVLGREAVSAAGAI---------GLAVVKG-------REGGRGARVW--------WTV---------------RGERRGVV-------EALALGGRYEEAADVVLEGLAHQPRLMVEEMDKLVSALARACVRTEDIAKGYEVGPLPPLVRGVGPLKPRVPVPSAEAXXXXXXXXXXRAPEHATSLWPVLRQLLRLDSADNNFSYHTAAVAVLLEGMPASTLPRWVEDSYLGLGQELPDPPANANAFPPPQPRALLAPWKAFTSGRGGNGASGPDPTKLLDMYVMDGRLEEACLFLSRVLDTRE-VGDIGALTELVPEKDGGTDYLPYASIDRLFALSEASLARSK-------GPPTTQ----------KEG-WVTAGGLAGAFETAQERLVGYLKVAKAVSDQAQPNRAAEAAAAGRGICDASAFMMTD 1818          
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Match: A0A6H5KLL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL3_9PHAE)

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 658/1473 (44.67%), Postives = 842/1473 (57.16%), Query Frame = 0
Query:  342 ELPNTGV-GLSQRAILAAPNDTGPLVDACVDKDLAIWALWARPRGHA--EGARGGITSYGRDGATLEAVDNIDIDQWSSVQHEEEDTVFDDLLR-KHDWEGMIRLRSPDFASEVEGMRKYERRSRVACAAVDAIESFYLRRMFTSGRFGRRALCLALRDALPLLDAAGPLSSSSTSLEHLEALALKGIRQAAEQAYESLEEAGPIFENPVSDQTFQKALTTVHGQWKRLLEACVVWGRVEARPLGLAPDGRGEFGTPAVVRAGRVSCLFPLSNQ------SPPMTGSGAPTRERVSPRTEDVTRW------RLEILRGIAAEVPGAIEKASAEMVDET---------------VEPGAATAALRVFEAESALAREGTAGGVGDPNHPNSFAEGAGRYRRKQLSVLKKVVEDLIKTPLGIDLADRVAVAVRMDTIEDFLSWVKSMSTELVPERYNPLDFRRGVRGTSSGIATASAFCAVRVFRERCAEARNLAMVFLLMLQQTQRTGLVDQLEVYIETQALPLALKCMNKYALAADVGSLRLRPRNDLEESSSL---------GEHPAMLEARKPWGCSVLEGMFLARRAMMQDYWQERAEEACSRRHLIEGLGGLPTLLANMCEDISPPCWKDLDNGGLAAFLQGCRQYRLGLPLVGLAVAWRRLADREDADAEVLMALGRGFVMSAEAVAHSGKRGSFEAACLLRKATSWFIKAEGSLEKSIRRGWMGG---KAQSLVEHYEVCLRELEEMRGRVKKAAGVAKGGK-----------------------DVLGESGALCALDLARLALSRDREMERAEGIRASELPPHQLAQQRARLCQLVFKHASEALKFDEAFNAICTNPEEQRREENIKALTQHMCESGRLGELCSLPLDEFPQ--NMTPSVIVTSTLWKLASDSNVAELVQEGAVRQGRPITNYFDCLYAFFTVRGMFVQAAEAQDEFRRRLQDHPAGSTLPFAAAAQRARLAALNALAVASSSGGDGSNGEGK------AGLFPRRGDPGRRLDASGQPADIRTVSSLSRDAAVASAAIELA--EARDPEGLEVFSGVPSMFSRRSSYNPAAVWNGCANGILWAQGSAVVLE-GNMWRRRSRGEKTTVITGVSKVMEALLETGRYEQAVDIALRGFEHKPKAMYAAMDKIVITVTRACALAEDIAGGFSREGLPPLVRGVGPLKPRVSPEKATP-----------ASERTESLWLVLRQLLRLDSAACNFSYHAKAAKTLLEGMPAYRLPSWLEDSFLGRGGAL-DAPSNANAFPQQRPRPLLAPWKAFASSRNAGNAGGANPTALLDLYVFDGRLEDACLFLSRLLDTDDTVTDVTSFTQLTPTERGGTDWLPYASIDRLLALSEASLARKSLRGGVVANGGTVQDVQDDVSDGNKEGDFSHRDGLERALNTARARLVEYFKIAKALTDQAQARRRAQAAM-GSSLSLAASFMVTD 1724
            E+P   V GL  + +  +    GPLVDA V+    +W LW RPRG        GG++SYG +G T ++V +  +D+W   Q +EED V D+L R K  W G++ LR P       G R       VA A+V+ +ESFYLRRMFT+GRFGRR L  A+R+A+PL+  AGPLSS+STSL+ L+ LAL+G+R AAEQA  +L+E     +      T Q+AL  VHG WKRLL ACV  GR EARPLGL P G   F TP VVRAGR +CL P  ++      S  + G+ +P + + SP T            R+  LRG+AA VP A E+A   +V ET                      A  R FEAESALAREGTAGG+ D  +     E  G Y+R+Q S L+KV + L++   G  LA+  A  ++ D + D L+W +S+     P R  PL    GV G SSGIATA+AF  V++ +ER AEARN A+V +L+L+Q  R GL DQLE  I   ALPLALKCMN++AL+A+VGS  LR R      +S             PA + A KPWGC+ LEG+FL    ++QDYW   + EA +R     GLGG+P+LLA MCE        DLD+GGL +FL   +QY+L LPLVGLAV W+     E   A VL ++ RGF+ SAEA A S   GS  +  LL +AT W++K+  +L   + R   GG   +A+ +V+H+E  L E+E +R  +K+                                +  G  G + AL+LAR AL  +RE+  + G +     PHQ  Q++ARLCQLVFKHASEAL F EAF+A+C NP +Q+R+EN+ AL QHMCESGRLGELCSL L + P+  +   S +V   LW LA  S+V +LV  G   +GR   NY+DCLYAF+  RG  V AA AQDE R RL+ H A STLPFAA AQRARLAALNAL+VA ++                A + P  G+  RRLD  G+PA +RTV+ L R+A  A+ AI LA   A   EG++ F G             A            A G  V +E GN                VS ++EAL   GRYE+A D+ L G  H+P+ M   MDK+V  + RAC   EDIA G+    LP LVRGVGPLKPRV    A             A E   SLW VLRQLLRLDSA  NFSYH      LLE MPA  LP W+EDS+LG G  + D P+NANAF   +P+ LLAPWKAF S R      G +PT LLD+YV DGRLE+ACLFLSR+LDT + + D+ + T+L P + GGTD+LPYASIDRL ALSEASLAR        + G      +  V+ G          GL  A  TA+ RLV+YFK+AKA++DQAQ  R A+AA  G     A++FM+ D
Sbjct:   12 EVPRCFVSGLRDKNLHTSLLPPGPLVDAHVNHKGVVWTLWDRPRGGGGVSSGYGGVSSYGENG-TFDSVHHQTVDEWLGSQ-QEEDAVLDELFRSKGGWPGLVALRCPPQGGGEGGTRA------VAFASVELMESFYLRRMFTAGRFGRRVLASAIREAVPLMSNAGPLSSNSTSLQDLQNLALEGVRSAAEQACRTLDEEEDKDDPLAMSLTAQQALRDVHGFWKRLLLACVEGGRAEARPLGLVPGGMETFVTPFVVRAGRTTCLIPRGDRRGGISMSVAVAGTSSPRQGQGSPITGXXXXXXXSCDRRVARLRGLAAGVPAAFEEA---LVAETGGRVXXXXXXXXXXXXXXXXXXAWFRGFEAESALAREGTAGGLADAENLPRGLEEEGGYKREQASFLRKVSDILLRNTTGACLAEAAAAVLQTDAVRDVLTWAESLKPAKEPPRSRPLGHGGGVCGCSSGIATAAAFGTVKLMKERSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPLALKCMNQHALSAEVGSHHLRVRGGTHPVASRRGGRSGWGGDAQPASVAASKPWGCTALEGLFLDSWGVVQDYWA-MSTEASARGGRQLGLGGVPSLLAGMCEGTLRSHLTDLDSGGLISFLHANQQYQLALPLVGLAVEWQWRMKVEP-HAAVLTSIARGFLYSAEAAARSEGGGSPSSGSLLDRATKWYLKSSQALRAQLLRSSGGGGDNQAELVVKHFEDALLEVERVREGLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETERELRGSAGGQQ----PHQPHQRKARLCQLVFKHASEALCFREAFDAVCDNPIDQQRKENLAALAQHMCESGRLGELCSLSLADCPRGGDWHTSRVVERALWPLARRSSVDDLVG-GPCGKGRSRVNYYDCLYAFYMARGEEVAAARAQDELRERLEAHSAASTLPFAAGAQRARLAALNALSVAGNAYPSSDXXXXXXXXXXVASICPPPGE--RRLDGYGRPAGVRTVAVLGREAVSAAGAIGLAVANAAKEEGVQEFGG-----------RYAEXXXXXXXXXXXAVGVQVSVEVGN--------------ADVSGLVEALALAGRYEEAADVVLEGLAHQPRLMVEEMDKLVSALARACVRTEDIAQGYEVGPLPLLVRGVGPLKPRVPVPWAEAEGDTTXXXXXRAQEHATSLWPVLRQLLRLDSADNNFSYHTATVAVLLEEMPASTLPPWVEDSYLGLGQEVPDPPANANAFLPPQPQALLAPWKAFTSGRGGNGPSGPDPTKLLDMYVLDGRLEEACLFLSRVLDTRE-IGDIGALTELVPEKDGGTDYLPYASIDRLFALSEASLAR--------SKGAPTTQKEGRVTAG----------GLAGAFETAQERLVQYFKVAKAVSDQAQPNRAAEAAAAGRGTCDASTFMMMD 1420          
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Match: A0A836CGQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ6_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.650e-27
Identity = 163/548 (29.74%), Postives = 230/548 (41.97%), Query Frame = 0
Query: 1111 ARLCQLVFKHASEALKFDEAFNAICTNPEEQRREENIKALTQHMCESGRLGELCSL-PLDE---FPQNMTPSVI--VTSTLWKLASDSNVAELVQEGAVRQGRPITNYFDCLYAFFTVRGMFVQAAEAQDEFRRRLQDHPAGSTLPFAAAAQRARLAALNALAVASSSGGDGSNGEGKAGLFPRRGDPGRRLDASGQPADIRTVSSLSRDAAVASAAIELAEARDPEGLEVFSGVPSMFSRRSSYNPAAVW-NGCANGILWAQGSAVVLEGNMWRRRSRGEKTTVITGVSKVMEA------LLETGRYEQAVDIALRGFEHKPKAMY--AAMDKIVITVTRACALAEDIAGGFSREGLPPL-VRGVGPLKP---RVSPEKATPASERTESLWLVLRQLL-RLDSAACNFSYHAKAAKTLLEGMPAYRLPSWLEDSFLGRGGALDAPSNANAFPQQRPRPLLAPWKAFASSRNAGNAGGANPTALLDLYVFDGRLEDACLFLSRLLDTDDTVTDVTSFTQLTPTERGGTDWLPYASIDRLLALSEASLA 1638
            A L    F+HA++   F  A +A+C NP+ QRR+++ + L   +CE+GRLGELC+L P +E       +  S++  V + L + A  S+ A LV  G+     P  NY+ C YAF+T +G + +AA AQ +  RRLQ  P  +T   + AA RA+ AAL+ LA+A+                 R   PG R                        A IE+A A  P  ++V     S   +R     A V     A   L A+ + V     +   R+    T      ++   A      LL  G  E A  +AL  +  +       AA+ ++V  +  ACA  E  A G     +P     G GPL P   R  PE    A  R    W +LR+LL RLD A  NF+ H  A + +LE  P   LP WL  S  G                QR                A  A  A+P  LL + +  G L +AC   +RL D +  + D           R G DW+PY ++D L A  E  L+
Sbjct: 1161 AALMSSQFRHAAKMKDFGAAADALCGNPDLQRRKDHTEELVLGLCENGRLGELCALSPCEERDPATSKLKWSLLLDVEAVLHQQADRSDAAMLVC-GSSDASPPCVNYYACQYAFYTAQGAWRKAARAQLQLHRRLQTLPPPAT---SLAALRAQSAALS-LALAA---------------LRRAPTPGER------------------------ALIEIAAADAPAVMDVDDN--SFDLQRQQQQAAGVRVRLTAPPELRAERALVRARVTLTEARAPPHATPHRIAAAQADSAEAAIGELLAAGCVEAAAALALAHWPQRAARARRDAALARVVAVLANACARYESNADGALETDMPLSDAGGAGPLTPPGARAGPE----ADRRRGDAWALLRELLFRLDGAETNFALHVAAVRAVLETRPRVPLPRWLVASIEG----------------QRDGXXXXXXXXXXXXXFAXXA--AHPALLLGVLIEHGELIEACGIAARLFDLE--LADKGELAARRRGRRAGRDWVPYQTLDALFAACEQRLS 1638          
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Match: A0A6H5KTS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS0_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.030e-20
Identity = 60/113 (53.10%), Postives = 71/113 (62.83%), Query Frame = 0
Query:    5 AEEAPLGFAGDVDG-TVSFRIT--RDAPRGF-------------TVSRAERVPPXXXLEDESLIGGGVILTGMSAGRTLVTWRAQEELGLWLEERGLDDDLEGGGLHLALEGA 101
            A+E+PLGFAGD+DG T SFR++  +  P                 V R     P    +D  L+GGGV+L    AGRT+VTWRAQE  GLWLEERGLDDDLEGGGLHL L+GA
Sbjct:    6 ADESPLGFAGDIDGGTSSFRLSSGQQPPPSLGNAGPATSSAFPVQVGRXXXXSP----QDRGLVGGGVLLEEAEAGRTVVTWRAQES-GLWLEERGLDDDLEGGGLHLQLQGA 113          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXJ0_ECTSI0.000e+046.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLL3_9PHAE0.000e+044.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CGQ6_9STRA1.650e-2729.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KTS0_9PHAE1.030e-2053.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 519..539
NoneNo IPR availablePFAMPF11715Nup160coord: 242..610
e-value: 6.5E-10
score: 38.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1278..1302
IPR021717Nucleoporin Nup120/160PANTHERPTHR21286NUCLEAR PORE COMPLEX PROTEIN NUP160coord: 1390..1638
coord: 129..610
coord: 939..1270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1174contigA-nodosum_M_contig1174:44056..99637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1174.1.1mRNA_A-nodosum_M_contig1174.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1174 39171..101011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1174.1.1 ID=prot_A-nodosum_M_contig1174.1.1|Name=mRNA_A-nodosum_M_contig1174.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1725bp
MRAVAEEAPLGFAGDVDGTVSFRITRDAPRGFTVSRAERVPPPPPLEDES
LIGGGVILTGMSAGRTLVTWRAQEELGLWLEERGLDDDLEGGGLHLALEG
AVPERGAVGIFRTENMDDRGAESPFFEVCVYTNAGVIYRVTLLRPTAFPG
NKIPSVFTAMGSERACDVLKLPRGGAIPSSGPCCWIKSELLVIGGNDGNV
QCVSIVEGADGQVACLTEETLKEKGGWIPLYGGGGGNAKTVAISGFWQEQ
EKRAVILTLHTDWSLRVWTTTPTGSRRGGGLAQRMDVRQFLGATHQRQTA
AMDEAGCYFSATAGQEESGQDKRFVIAAVAAEGGLPVHVVLELPNTGVGL
SQRAILAAPNDTGPLVDACVDKDLAIWALWARPRGHAEGARGGITSYGRD
GATLEAVDNIDIDQWSSVQHEEEDTVFDDLLRKHDWEGMIRLRSPDFASE
VEGMRKYERRSRVACAAVDAIESFYLRRMFTSGRFGRRALCLALRDALPL
LDAAGPLSSSSTSLEHLEALALKGIRQAAEQAYESLEEAGPIFENPVSDQ
TFQKALTTVHGQWKRLLEACVVWGRVEARPLGLAPDGRGEFGTPAVVRAG
RVSCLFPLSNQSPPMTGSGAPTRERVSPRTEDVTRWRLEILRGIAAEVPG
AIEKASAEMVDETVEPGAATAALRVFEAESALAREGTAGGVGDPNHPNSF
AEGAGRYRRKQLSVLKKVVEDLIKTPLGIDLADRVAVAVRMDTIEDFLSW
VKSMSTELVPERYNPLDFRRGVRGTSSGIATASAFCAVRVFRERCAEARN
LAMVFLLMLQQTQRTGLVDQLEVYIETQALPLALKCMNKYALAADVGSLR
LRPRNDLEESSSLGEHPAMLEARKPWGCSVLEGMFLARRAMMQDYWQERA
EEACSRRHLIEGLGGLPTLLANMCEDISPPCWKDLDNGGLAAFLQGCRQY
RLGLPLVGLAVAWRRLADREDADAEVLMALGRGFVMSAEAVAHSGKRGSF
EAACLLRKATSWFIKAEGSLEKSIRRGWMGGKAQSLVEHYEVCLRELEEM
RGRVKKAAGVAKGGKDVLGESGALCALDLARLALSRDREMERAEGIRASE
LPPHQLAQQRARLCQLVFKHASEALKFDEAFNAICTNPEEQRREENIKAL
TQHMCESGRLGELCSLPLDEFPQNMTPSVIVTSTLWKLASDSNVAELVQE
GAVRQGRPITNYFDCLYAFFTVRGMFVQAAEAQDEFRRRLQDHPAGSTLP
FAAAAQRARLAALNALAVASSSGGDGSNGEGKAGLFPRRGDPGRRLDASG
QPADIRTVSSLSRDAAVASAAIELAEARDPEGLEVFSGVPSMFSRRSSYN
PAAVWNGCANGILWAQGSAVVLEGNMWRRRSRGEKTTVITGVSKVMEALL
ETGRYEQAVDIALRGFEHKPKAMYAAMDKIVITVTRACALAEDIAGGFSR
EGLPPLVRGVGPLKPRVSPEKATPASERTESLWLVLRQLLRLDSAACNFS
YHAKAAKTLLEGMPAYRLPSWLEDSFLGRGGALDAPSNANAFPQQRPRPL
LAPWKAFASSRNAGNAGGANPTALLDLYVFDGRLEDACLFLSRLLDTDDT
VTDVTSFTQLTPTERGGTDWLPYASIDRLLALSEASLARKSLRGGVVANG
GTVQDVQDDVSDGNKEGDFSHRDGLERALNTARARLVEYFKIAKALTDQA
QARRRAQAAMGSSLSLAASFMVTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021717Nucleoporin_Nup160