mRNA_A-nodosum_M_contig1174.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Match: D7FXJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ0_ECTSI) HSP 1 Score: 1314 bits (3401), Expect = 0.000e+0 Identity = 854/1844 (46.31%), Postives = 1076/1844 (58.35%), Query Frame = 3
Query: 75 AEEAPLGFAGDVDG-TVSFRITRDAPRGFTVSRAERVPPXXXL-----------EDESLIGGGVILTGMSAGRTLVTWRAQEELGLWLEERGLDDDLEGGGLHLALEGAVPERGAVGIFRTENMDDRGAESPFFEVCVYTNAGVIYRVTLLRPTAFPGNKIPSVFTAMGSERACDVLKLP-RGGAIPSSGPCCWIKSELLVIGGNDGNVQCVSIVEGADGQVACLTEETLKEKGGWIPLYGGGGGNAKTVAISGFWQEQEKRAVILTLHTDWSLRVWTTT--PTGS-RRGGGLAQRMDVRQFLGATHQRQTAAMDEAGCYFSATAGQEESGQDKRFVIAAVAAEGGLPVHVVLELPNTGVGLSQRAILAAPNDTGPLVDACVDKDLAIWALWARPRGHA--EGARGGITSYGRDGATLEAVDNIDIDQWSSVQHEEEDTVFDDLLR-KHDWEGMIRLRSPDFASEVEGMRKYERRSRVACAAVDAIESFYLRRMFTSGRFGRRALCLALRDALPLLDAAGPLSSSSTSLEHLEALALKGIRQAAEQAYESLEEAGPIFENPVSDQTFQKALTTVHGQWKRLLEACVVWGRVEARPLGLAPDGRGEFGTPAVVRAGRVSCLFP---------------LSNQSPPMTGSGAPTRERVSPRTEDVTRWRLEILRGIAAEVPGAIEKASAEMVDET---------------VEPGAATAALRVFEAESALAREGTAGGVGDP-NHPNSFAEGAGRYRRKQLSVLKKVVEDLIKTPLGIDLADRVAVAVRMDTIEDFLSWVKSMSTELVPERYNPLDFRRGVRGTSSGIATASAFCAVRVFRERCAEARNLAMVFLLMLQQTQRTGLVDQLEVYIETQALPLALKCMNKYALAADVGSLRLRPRNDLEESSS-------------LGE-HPAMLEARKPWGCSVLEGMFLARRAMMQDYWQERAEEACSRRHLIEGLGGLPTLLANMCEDISPPCWKDLDNGGLAAFLQGCRQYRLGLPLVGLAVAWR----------RLADREDADAEVLMALGRGFVMSAEAVAHSGKRGSFEAACLLRKATSWFIKAEGSLEKSIRRGWMGG---KAQSLVEHYEVCLRELEEMRGRVKKAAGVAKGGK-----------------------DVLGESGALCALDLARLALSRDREMERAEGIRASELPPHQLAQQRARLCQLVFKHASEALKFDEAFNAICTNPEEQRREENIKALTQHMCESGRLGELCSLPLDEFPQN--MTPSVIVTSTLWKLASDSNVAELVQEGAVRQGRPITNYFDCLYAFFTVRGMFVQAAEAQDEFRR-------RLQDHPAGSTLPFAAAAQRARLAALNALAVASSS--GGDGSNGEGKAGLFPRRGDPGRRLDASGQPADIRTVSSLSRDAAVASAAIELAEARDPEGLEVFSGVPSMFSRRSSYNPAAVWNGCANGILWAQGSAVVLEGNMWRRRSRGEKTTVITGVSKVMEALLETGRYEQAVDIALRGFEHKPKAMYAAMDKIVITVTRACALAEDIAGGFSREGLPPLVRGVGPLKPRVSPEKATP-----------ASERTESLWLVLRQLLRLDSAACNFSYHAKAAKTLLEGMPAYRLPSWLEDSFLGRGGAL-DAPSNANAFPQQRPRPLLAPWKAFASSRNAGNAGGANPTALLDLYVFDGRLEDACLFLSRLLDTDDTVTDVTSFTQLTPTERGGTDWLPYASIDRLLALSEASLARKSLRGGVVANGGTVQDVQDDVSDGNKEGDFSHRDGLERALNTARARLVEYFKIAKALTDQAQARRRAQAAM-GSSLSLAASFMVTD 5234
A+E+PLGFAGD+DG T SFR++ ++ A XXX +D L+GGGV+L G+ AGRT+VTWRAQE GLWLEERGLDDDLEGGGLHL L+G V GAVG+F D G + VC YT+ V++RV L RP A PG+K S +AM + + V KL R G + GP CWI +LLV+GG DG++ CV+I EG DGQ A L EETL+ K GW PL G G NA VA++GFW+E+EK+AV+LTLHTDWS RVW T+ TG+ RRGGGL R+D RQFLG+ H+RQTAA+D + C+ S A +++ FV+AAVAAEGGLPVH+VL + G L +R AP++ GPLVDA V+ +W LW RPRG GG++SYG +G T ++V + ID+W Q +EED V D+L R K W G++ LR P G R VA +V+ +ESFYLRRMFT+GRFGRR L A+R+A+PL+ AGPLSS+STSL+ L+ LAL+G+R AAEQA+ +L+E + T Q+AL VHG WKRLL ACV GR EARPLGL P G F TP VVRAGR +CL P ++ S P G G+ T + R R+ LRG+AA VP A E+A +V E+ A R FEAESALAREGTAGG+ D N P E G Y+R+Q S L+KV + L+++ G LA+ A ++ D + D L+W +S+ P R PL GV G SSGIATA+AF V++ +ER AEARN A+V +L+L+Q R GL DQLE I ALP+ALKCMN+YAL+A+VGS LR R +S +G+ PA + A KPWGC+ LEG+FL R ++QDYW E + R L GLGG+P+LLA MCE LD+GGL +FL QY+L LPLVGLAV W+ R + VL ++ RGF+ SAEA A S GS + LL +AT W++K+ +L + R GG +A+S+VEH+E L E+E +R +++ + G G + AL+LAR AL +RE+ + G + Q++ARLCQLVFKHASEAL F EAF+A+C NP +Q+R+EN+ AL QHMCESGRLGELCSL L + P PS +V S LW LA S+V +LV G +GR NY+DCLYAF+ RG V AA AQDE R R + H A STLPFAA AQRARLAALNAL+VA ++ D + A + P G+ RRLD G+PA +RTV+ L R+A A+ AI GL V G R A VW W RGE+ V+ EAL GRYE+A D+ L G H+P+ M MDK+V + RAC EDIA G+ LPPLVRGVGPLKPRV A A E SLW VLRQLLRLDSA NFSYH A LLEGMPA LP W+EDS+LG G L D P+NANAFP +PR LLAPWKAF S R A G +PT LLD+YV DGRLE+ACLFLSR+LDT + V D+ + T+L P + GGTD+LPYASIDRL ALSEASLAR T Q KEG + GL A TA+ RLV Y K+AKA++DQAQ R A+AA G + A++FM+TD
Sbjct: 70 ADESPLGFAGDIDGGTSSFRLSSGQQPPPSLGNAGHGAXXXXXXXXXXXXXXSPQDRGLVGGGVLLEGVEAGRTVVTWRAQES-GLWLEERGLDDDLEGGGLHLQLQGGVSSAGAVGVF---GAGDGGGDQSSLAVCAYTDDRVVHRVLLQRPAAPPGDKAQSALSAMSAPQGRKVAKLGCREGGL---GPSCWINRDLLVVGGMDGSLHCVTIAEGIDGQTASLCEETLRVKTGWNPLAVGSGDNASAVAVTGFWREEEKQAVVLTLHTDWSFRVWVTSRASTGAKRRGGGLVSRVDARQFLGSPHERQTAAVDGSSCFLSPVAAVANP-EEENFVVAAVAAEGGLPVHIVLTISPRGGELVRRCEFEAPSEAGPLVDAHVNHKGIVWTLWDRPRGGGGVSSGCGGVSSYGENG-TFDSVHHQTIDEWLGSQ-QEEDAVLDELFRRKGGWPGLVALRCPPQGGGGRGTRA------VALDSVELMESFYLRRMFTAGRFGRRVLASAIREAVPLMHNAGPLSSNSTSLQDLQNLALEGVRNAAEQAFRTLDEENDKDDPLAMSPTAQQALRDVHGFWKRLLLACVEGGRAEARPLGLVPGGMETFVTPFVVRAGRTTCLMPRGDRRGGISMAVAVAVAGTSSPRQGQGSLTTDXXXXXXSSCDR-RVARLRGLAAGVPAAFEEA---LVAESGXXXXXXXXXXXXXXXXXXXXXAWFRGFEAESALAREGTAGGLADAENLPRGLGEEGG-YKREQASFLRKVSDVLLRSTTGACLAEAAAAVLQTDAVRDVLTWAESLKPAKEPPRSRPLGHGGGVCGCSSGIATAAAFGTVKLMKERSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPVALKCMNQYALSAEVGSHHLRVRGGTHPVASWRGGRSGWGGGGGIGDAQPASVAASKPWGCTALEGLFLDSRGVVQDYWAMSTEASTRGRQL--GLGGVPSLLAGMCEGTLRSHLTGLDSGGLVSFLHASEQYQLALPLVGLAVEWQWRMKVGXXXXXXXHRPEPHTAVLTSIARGFLYSAEAAARSEGGGSSSSGPLLDRATKWYLKSSQALRAQLLRPGGGGGHNQAESVVEHFEGALLEVERVREGLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETERELRGSAG----DQXXXXXXQRQARLCQLVFKHASEALCFREAFDAVCDNPIDQQRKENLAALVQHMCESGRLGELCSLSLADCPHGGGWHPSGVVDSALWPLARRSSVDDLVG-GPGGKGRSRVNYYDCLYAFYMARGEEVAAARAQDELRESPARSFDRWKPHSAASTLPFAAGAQRARLAALNALSVAGNAYPSSDDTAAATVASICPPAGE--RRLDGYGRPAGVRTVAVLGREAVSAAGAI---------GLAVVKG-------REGGRGARVW--------WTV---------------RGERRGVV-------EALALGGRYEEAADVVLEGLAHQPRLMVEEMDKLVSALARACVRTEDIAKGYEVGPLPPLVRGVGPLKPRVPVPSAEAXXXXXXXXXXRAPEHATSLWPVLRQLLRLDSADNNFSYHTAAVAVLLEGMPASTLPRWVEDSYLGLGQELPDPPANANAFPPPQPRALLAPWKAFTSGRGGNGASGPDPTKLLDMYVMDGRLEEACLFLSRVLDTRE-VGDIGALTELVPEKDGGTDYLPYASIDRLFALSEASLARSK-------GPPTTQ----------KEG-WVTAGGLAGAFETAQERLVGYLKVAKAVSDQAQPNRAAEAAAAGRGICDASAFMMTD 1818
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Match: A0A6H5KLL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL3_9PHAE) HSP 1 Score: 974 bits (2518), Expect = 0.000e+0 Identity = 658/1473 (44.67%), Postives = 842/1473 (57.16%), Query Frame = 3
Query: 1086 ELPNTGV-GLSQRAILAAPNDTGPLVDACVDKDLAIWALWARPRGHA--EGARGGITSYGRDGATLEAVDNIDIDQWSSVQHEEEDTVFDDLLR-KHDWEGMIRLRSPDFASEVEGMRKYERRSRVACAAVDAIESFYLRRMFTSGRFGRRALCLALRDALPLLDAAGPLSSSSTSLEHLEALALKGIRQAAEQAYESLEEAGPIFENPVSDQTFQKALTTVHGQWKRLLEACVVWGRVEARPLGLAPDGRGEFGTPAVVRAGRVSCLFPLSNQ------SPPMTGSGAPTRERVSPRTEDVTRW------RLEILRGIAAEVPGAIEKASAEMVDET---------------VEPGAATAALRVFEAESALAREGTAGGVGDPNHPNSFAEGAGRYRRKQLSVLKKVVEDLIKTPLGIDLADRVAVAVRMDTIEDFLSWVKSMSTELVPERYNPLDFRRGVRGTSSGIATASAFCAVRVFRERCAEARNLAMVFLLMLQQTQRTGLVDQLEVYIETQALPLALKCMNKYALAADVGSLRLRPRNDLEESSSL---------GEHPAMLEARKPWGCSVLEGMFLARRAMMQDYWQERAEEACSRRHLIEGLGGLPTLLANMCEDISPPCWKDLDNGGLAAFLQGCRQYRLGLPLVGLAVAWRRLADREDADAEVLMALGRGFVMSAEAVAHSGKRGSFEAACLLRKATSWFIKAEGSLEKSIRRGWMGG---KAQSLVEHYEVCLRELEEMRGRVKKAAGVAKGGK-----------------------DVLGESGALCALDLARLALSRDREMERAEGIRASELPPHQLAQQRARLCQLVFKHASEALKFDEAFNAICTNPEEQRREENIKALTQHMCESGRLGELCSLPLDEFPQ--NMTPSVIVTSTLWKLASDSNVAELVQEGAVRQGRPITNYFDCLYAFFTVRGMFVQAAEAQDEFRRRLQDHPAGSTLPFAAAAQRARLAALNALAVASSSGGDGSNGEGK------AGLFPRRGDPGRRLDASGQPADIRTVSSLSRDAAVASAAIELA--EARDPEGLEVFSGVPSMFSRRSSYNPAAVWNGCANGILWAQGSAVVLE-GNMWRRRSRGEKTTVITGVSKVMEALLETGRYEQAVDIALRGFEHKPKAMYAAMDKIVITVTRACALAEDIAGGFSREGLPPLVRGVGPLKPRVSPEKATP-----------ASERTESLWLVLRQLLRLDSAACNFSYHAKAAKTLLEGMPAYRLPSWLEDSFLGRGGAL-DAPSNANAFPQQRPRPLLAPWKAFASSRNAGNAGGANPTALLDLYVFDGRLEDACLFLSRLLDTDDTVTDVTSFTQLTPTERGGTDWLPYASIDRLLALSEASLARKSLRGGVVANGGTVQDVQDDVSDGNKEGDFSHRDGLERALNTARARLVEYFKIAKALTDQAQARRRAQAAM-GSSLSLAASFMVTD 5234
E+P V GL + + + GPLVDA V+ +W LW RPRG GG++SYG +G T ++V + +D+W Q +EED V D+L R K W G++ LR P G R VA A+V+ +ESFYLRRMFT+GRFGRR L A+R+A+PL+ AGPLSS+STSL+ L+ LAL+G+R AAEQA +L+E + T Q+AL VHG WKRLL ACV GR EARPLGL P G F TP VVRAGR +CL P ++ S + G+ +P + + SP T R+ LRG+AA VP A E+A +V ET A R FEAESALAREGTAGG+ D + E G Y+R+Q S L+KV + L++ G LA+ A ++ D + D L+W +S+ P R PL GV G SSGIATA+AF V++ +ER AEARN A+V +L+L+Q R GL DQLE I ALPLALKCMN++AL+A+VGS LR R +S PA + A KPWGC+ LEG+FL ++QDYW + EA +R GLGG+P+LLA MCE DLD+GGL +FL +QY+L LPLVGLAV W+ E A VL ++ RGF+ SAEA A S GS + LL +AT W++K+ +L + R GG +A+ +V+H+E L E+E +R +K+ + G G + AL+LAR AL +RE+ + G + PHQ Q++ARLCQLVFKHASEAL F EAF+A+C NP +Q+R+EN+ AL QHMCESGRLGELCSL L + P+ + S +V LW LA S+V +LV G +GR NY+DCLYAF+ RG V AA AQDE R RL+ H A STLPFAA AQRARLAALNAL+VA ++ A + P G+ RRLD G+PA +RTV+ L R+A A+ AI LA A EG++ F G A A G V +E GN VS ++EAL GRYE+A D+ L G H+P+ M MDK+V + RAC EDIA G+ LP LVRGVGPLKPRV A A E SLW VLRQLLRLDSA NFSYH LLE MPA LP W+EDS+LG G + D P+NANAF +P+ LLAPWKAF S R G +PT LLD+YV DGRLE+ACLFLSR+LDT + + D+ + T+L P + GGTD+LPYASIDRL ALSEASLAR + G + V+ G GL A TA+ RLV+YFK+AKA++DQAQ R A+AA G A++FM+ D
Sbjct: 12 EVPRCFVSGLRDKNLHTSLLPPGPLVDAHVNHKGVVWTLWDRPRGGGGVSSGYGGVSSYGENG-TFDSVHHQTVDEWLGSQ-QEEDAVLDELFRSKGGWPGLVALRCPPQGGGEGGTRA------VAFASVELMESFYLRRMFTAGRFGRRVLASAIREAVPLMSNAGPLSSNSTSLQDLQNLALEGVRSAAEQACRTLDEEEDKDDPLAMSLTAQQALRDVHGFWKRLLLACVEGGRAEARPLGLVPGGMETFVTPFVVRAGRTTCLIPRGDRRGGISMSVAVAGTSSPRQGQGSPITGXXXXXXXSCDRRVARLRGLAAGVPAAFEEA---LVAETGGRVXXXXXXXXXXXXXXXXXXAWFRGFEAESALAREGTAGGLADAENLPRGLEEEGGYKREQASFLRKVSDILLRNTTGACLAEAAAAVLQTDAVRDVLTWAESLKPAKEPPRSRPLGHGGGVCGCSSGIATAAAFGTVKLMKERSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPLALKCMNQHALSAEVGSHHLRVRGGTHPVASRRGGRSGWGGDAQPASVAASKPWGCTALEGLFLDSWGVVQDYWA-MSTEASARGGRQLGLGGVPSLLAGMCEGTLRSHLTDLDSGGLISFLHANQQYQLALPLVGLAVEWQWRMKVEP-HAAVLTSIARGFLYSAEAAARSEGGGSPSSGSLLDRATKWYLKSSQALRAQLLRSSGGGGDNQAELVVKHFEDALLEVERVREGLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETERELRGSAGGQQ----PHQPHQRKARLCQLVFKHASEALCFREAFDAVCDNPIDQQRKENLAALAQHMCESGRLGELCSLSLADCPRGGDWHTSRVVERALWPLARRSSVDDLVG-GPCGKGRSRVNYYDCLYAFYMARGEEVAAARAQDELRERLEAHSAASTLPFAAGAQRARLAALNALSVAGNAYPSSDXXXXXXXXXXVASICPPPGE--RRLDGYGRPAGVRTVAVLGREAVSAAGAIGLAVANAAKEEGVQEFGG-----------RYAEXXXXXXXXXXXAVGVQVSVEVGN--------------ADVSGLVEALALAGRYEEAADVVLEGLAHQPRLMVEEMDKLVSALARACVRTEDIAQGYEVGPLPLLVRGVGPLKPRVPVPWAEAEGDTTXXXXXRAQEHATSLWPVLRQLLRLDSADNNFSYHTATVAVLLEEMPASTLPPWVEDSYLGLGQEVPDPPANANAFLPPQPQALLAPWKAFTSGRGGNGPSGPDPTKLLDMYVLDGRLEEACLFLSRVLDTRE-IGDIGALTELVPEKDGGTDYLPYASIDRLFALSEASLAR--------SKGAPTTQKEGRVTAG----------GLAGAFETAQERLVQYFKVAKAVSDQAQPNRAAEAAAAGRGTCDASTFMMMD 1420
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Match: A0A836CGQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ6_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.350e-27 Identity = 163/548 (29.74%), Postives = 230/548 (41.97%), Query Frame = 3
Query: 3393 ARLCQLVFKHASEALKFDEAFNAICTNPEEQRREENIKALTQHMCESGRLGELCSL-PLDE---FPQNMTPSVI--VTSTLWKLASDSNVAELVQEGAVRQGRPITNYFDCLYAFFTVRGMFVQAAEAQDEFRRRLQDHPAGSTLPFAAAAQRARLAALNALAVASSSGGDGSNGEGKAGLFPRRGDPGRRLDASGQPADIRTVSSLSRDAAVASAAIELAEARDPEGLEVFSGVPSMFSRRSSYNPAAVW-NGCANGILWAQGSAVVLEGNMWRRRSRGEKTTVITGVSKVMEA------LLETGRYEQAVDIALRGFEHKPKAMY--AAMDKIVITVTRACALAEDIAGGFSREGLPPL-VRGVGPLKP---RVSPEKATPASERTESLWLVLRQLL-RLDSAACNFSYHAKAAKTLLEGMPAYRLPSWLEDSFLGRGGALDAPSNANAFPQQRPRPLLAPWKAFASSRNAGNAGGANPTALLDLYVFDGRLEDACLFLSRLLDTDDTVTDVTSFTQLTPTERGGTDWLPYASIDRLLALSEASLA 4976
A L F+HA++ F A +A+C NP+ QRR+++ + L +CE+GRLGELC+L P +E + S++ V + L + A S+ A LV G+ P NY+ C YAF+T +G + +AA AQ + RRLQ P +T + AA RA+ AAL+ LA+A+ R PG R A IE+A A P ++V S +R A V A L A+ + V + R+ T ++ A LL G E A +AL + + AA+ ++V + ACA E A G +P G GPL P R PE A R W +LR+LL RLD A NF+ H A + +LE P LP WL S G QR A A A+P LL + + G L +AC +RL D + + D R G DW+PY ++D L A E L+
Sbjct: 1161 AALMSSQFRHAAKMKDFGAAADALCGNPDLQRRKDHTEELVLGLCENGRLGELCALSPCEERDPATSKLKWSLLLDVEAVLHQQADRSDAAMLVC-GSSDASPPCVNYYACQYAFYTAQGAWRKAARAQLQLHRRLQTLPPPAT---SLAALRAQSAALS-LALAA---------------LRRAPTPGER------------------------ALIEIAAADAPAVMDVDDN--SFDLQRQQQQAAGVRVRLTAPPELRAERALVRARVTLTEARAPPHATPHRIAAAQADSAEAAIGELLAAGCVEAAAALALAHWPQRAARARRDAALARVVAVLANACARYESNADGALETDMPLSDAGGAGPLTPPGARAGPE----ADRRRGDAWALLRELLFRLDGAETNFALHVAAVRAVLETRPRVPLPRWLVASIEG----------------QRDGXXXXXXXXXXXXXFAXXA--AHPALLLGVLIEHGELIEACGIAARLFDLE--LADKGELAARRRGRRAGRDWVPYQTLDALFAACEQRLS 1638
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Match: A0A6H5KTS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS0_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 3.370e-20 Identity = 60/113 (53.10%), Postives = 71/113 (62.83%), Query Frame = 3
Query: 75 AEEAPLGFAGDVDG-TVSFRIT--RDAPRGF-------------TVSRAERVPPXXXLEDESLIGGGVILTGMSAGRTLVTWRAQEELGLWLEERGLDDDLEGGGLHLALEGA 365
A+E+PLGFAGD+DG T SFR++ + P V R P +D L+GGGV+L AGRT+VTWRAQE GLWLEERGLDDDLEGGGLHL L+GA
Sbjct: 6 ADESPLGFAGDIDGGTSSFRLSSGQQPPPSLGNAGPATSSAFPVQVGRXXXXSP----QDRGLVGGGVLLEEAEAGRTVVTWRAQES-GLWLEERGLDDDLEGGGLHLQLQGA 113 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1174.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1174.1.1 >prot_A-nodosum_M_contig1174.1.1 ID=prot_A-nodosum_M_contig1174.1.1|Name=mRNA_A-nodosum_M_contig1174.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1725bp MRAVAEEAPLGFAGDVDGTVSFRITRDAPRGFTVSRAERVPPPPPLEDESback to top mRNA from alignment at A-nodosum_M_contig1174:39171..101011+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1174.1.1 ID=mRNA_A-nodosum_M_contig1174.1.1|Name=mRNA_A-nodosum_M_contig1174.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=61841bp|location=Sequence derived from alignment at A-nodosum_M_contig1174:39171..101011+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1174:39171..101011+ >mRNA_A-nodosum_M_contig1174.1.1 ID=mRNA_A-nodosum_M_contig1174.1.1|Name=mRNA_A-nodosum_M_contig1174.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=5175bp|location=Sequence derived from alignment at A-nodosum_M_contig1174:39171..101011+ (Ascophyllum nodosum dioecious)back to top |