mRNA_A-nodosum_M_contig1006.5.4 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_A-nodosum_M_contig1006.5.4
Unique Name	mRNA_A-nodosum_M_contig1006.5.4
Type	mRNA
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))

Homology

[Close]

BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot
Match: D7G8X5_ECTSI (Similar to Fe65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X5_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 4.320e-84
Identity = 510/1455 (35.05%), Postives = 633/1455 (43.51%), Query Frame = 3

Query:  156 AAGSPVSSAAADATEDAVLNLPSGWQQCMDSSGAIYFWNVDSGETTWEMPAGAIYRRKESLAPDSSALSSSGDAAG-TPKQVATGAAERDRVASDATSDTASEPDEGE-------DEDGGVKRSADIAP---------ATLVSSATAENDKXXXXXXXXXXXXNTPLSSA-AELDRTGGKSRSRKVGDGDQGANEER---------SVADDVAQAAAGLSCVDDLLAGIEAEMLSGTGDGGGN--------RGAGDADKGDKDPTEEIDSAKEDFSPLRAISSGLDVRAQQSYAELVASFA-AAEGEGGDVGRQA-DGMDVKRRLALELGAVLRARLSDWREGG-LDGAFLVRKLEEMAVQARSSLLYDRATTESTQTDDVPPAVDVSSDGACIAASTAVDSSKSFGGVAPPSEAGDNMPVDQERATLQKAAPKRNKSKEKSKKGRRLGSGLIQSNSVINGKKKDNEGKAASENREGGSEGNEDSCHAPVDAASKNGSTVAPGAKTTEALREAETIEKLRWADEVSAAXXXXXXXXXXXXK------EAEARERAVXXXXXXXXXXXXXXXXXXXXXXXXAVDGQASSPPRQQG-----------------DGDGHQDEMVPSVGDESREEGEIVVLPKAPDISEPVGRASEGEVSVSLSQNDAKEKNNDGDRTVGARPIGAPSAKHVVASEAGMAPVVNSLLP---SGWAVVWDDLHGANYYHNLATNETTWVLPSTRATEAPRASPAEEDPPAPSPPSPNGVKIPTGSVSRETSPEGGKGERRXXXXXXXXXXXXXXXXXXQTGDE-------------QAGDSSPTRGRGDMKKTTTLEQEISTEGNGSSAASTKASPTDKISIGEKEKAASAEPGARRAAEELPRLVVWRSQPRTWARPGVRYAGGAIDLRKFLRKNRRRLPPGTEGRRALLSISHFGWNSHGASMPSASLRDPRPRASRSLTASRPDGVPGSGKLTVELEMFMHFSREGECHEERTRPLFRRSDRLRACQPEDAFVVRVEGKVSEQTRRCATRLSRFRRQLVKMSLTLPAPSPSVPRPLSAFVRLPCPGTRAFPLTWQCYLPPRVSSSKRLGRGGIRSPWAAVWDKIQNAYYYHNTETNETTWVRPSASAVEEKRVVEDGVTPKISQEKNPTQDENIENVSHTALDSDPASQAPSASASGAVDMRPSTLVWWSDAGDVWNGESLSGLLLGYGPRRYRNLGGGYYMITLGSGPEWAAAAVAALGQGVADPVAEARVDWICCTASAPGYGLFLRWAGDDDEQKLFDVPDELFDDPPPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVGSISKKRKGAASLIDKWKAVASTAGEEAEREAERQEKMERWKARAAALDPDNPNFMPLGRKRR 4289
            A+ S VS+      E     LP+GWQQCMD++G +YFWN ++G+T+W+ P G    RK S A  SSA+ +  +A    P+ VA  A+      SDATSDTASE +E +        ED G  R                + V   T E +K              P  S  +  DR   + R R    G++   EE          + + DV  AA   + +DDLLAGIEAE+L G GDG G+        +G+   + GD   T E    +EDF+PL+ ++ GLDVRAQ+++AEL A  A AAEG+G + G    +  D   RL +EL AVLRARLSDWR+G  +DG        E A+ A SS    R          V P+V + +                              P  Q R    K                RLG                                                S+  P   + +A+R A   EKL+WADEVSAA XXXXXXXXXXX       +AE+  +                          A    A+S  R+                   D  G  D          +E+GE+ V+P A          +EG  + S +++DA                  PS      SE+G+    +  LP   SGW+ V+D  H A YYHNL T+ET+WVLP+T A     + PA                    S + E     G GERR                    GDE              AG S  T+    ++K ++  ++++     S AAS++AS  +K +      AA+ E  +    E L R+        TW                                  +   +H  +  H       S  DP                                                                   G   +++                     P+P PS   P +                         S               A   K  +A     TE +  T   P+ASA                                       A++AP+ S    VD+RP TLVWWSDAGDVWNG SLSGLL GYGPRRYRNLGGGYYM TL  GPEWA AAVAALGQGVADPVA AR+DW+ CTASAPGYGLFLR++G+DDEQKLFDVPDE FD     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        S GSI KKRKGAA+LIDKWKAVASTAGEEAE+EAE+QEKMERWKARAAA+DPDNPNF P+G++RR
Sbjct:   86 ASASSVSTPDPSPAESVTYTLPTGWQQCMDNAGLVYFWNTETGDTSWDPPEGT--ERKVSKA--SSAVDTPSEAPPIVPEAVADAASREAPAGSDATSDTASEAEEDKAVAXXXXXEDEGASRXXXXXXXXXXXXXXXVSEVCVDTEEVEKGAVSGEQEVADSAIPKRSPRSATDRPAAQDR-RMAAVGEEQKGEEELPQQSKSTGTGSSDVPVAA--TAGIDDLLAGIEAELLLGAGDGEGDLDGDKDEVKGSAVEENGDTRATGE----EEDFAPLQEVAPGLDVRAQEAHAELAALLAVAAEGKGEEAGLSVVEATDPSVRLGIELAAVLRARLSDWRQGECMDGI-------EAALTAPSSFSSSRRWRWRL----VQPSVRLLA------------------------------PQHQRRPDSLKV---------------RLGR-----------------------------------------------SSPLPLMSSPQAVRAARNAEKLKWADEVSAAAXXXXXXXXXXXXXXXXXAKAESEAKVAVIGTVEEGVTDSEGSNSDRRGKHAASGDDATSDKRKNATSTDTLATARAIVEGTIDLGGVGDXXXXXXXXXXKEDGEVTVVPAA----------TEGGAATSGAKDDA------------------PSVPAPDTSESGIVIAKDPTLPDVPSGWSAVFDTTHQAYYYHNLTTDETSWVLPATVA----ESHPAXXXXXXXXXXXXXXXXXSKKSKADEGDASTGGGERRSESSNRSRRRG-------SPGDEXXXXXXXXXXXSNSAGKSVETK----LEKRSSRRRDVA-----SGAASSEASQDEKPAPAASTDAAAKEGDSASIPESLSRI-----DNSTWV--------------------------------PVWDDNHQAFYYHDTVTDETSW-DPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXTPGGAQQRS---------------------PSPEPSTASPNAE------------------------SXXXXXXXXXXXXXVTADAPKAHSA-----TEEDVATAATPAASAA--------------------------------------AAEAPTTSV---VDLRPCTLVWWSDAGDVWNGVSLSGLLGGYGPRRYRNLGGGYYMTTLERGPEWATAAVAALGQGVADPVAAARMDWVSCTASAPGYGLFLRFSGEDDEQKLFDVPDEYFDXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGSSATGKSGGSIGKKRKGAANLIDKWKAVASTAGEEAEKEAEKQEKMERWKARAAAMDPDNPNFTPIGKRRR 1237

[Close]

BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot
Match: A0A6H5JJN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN1_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 7.420e-41
Identity = 271/807 (33.58%), Postives = 353/807 (43.74%), Query Frame = 3

Query:    3 LMGLVYYGSDSDEEGSSDRDGSSPTGSAAKTNEDRGVGLXXXXXXXXXAAEAAGSPVSSAAADATEDAVLNLPSGWQQCMDSSGAIYFWNVDSGETTWEMPAGAIYRRKESLAPDSSALSSSGDAAG-TPKQVATGAAERDRVASDATSDTASEPDE-------GEDEDGGVKRSADI------APATLVSSATAENDKXXXXXXXXXXXX--------NTPLSSA---AELDRTGGKSRSRKVGDGDQGANE----ERSV---ADDVAQAAAGLSCVDDLLAGIEAEMLSGTGDGGGNRGAGDADKGDKDPTEEIDSAK-----EDFSPLRAISSGLDVRAQQSYAELVASFA-AAEGEGGDVGRQA-DGMDVKRRLALELGAVLRARLSDWREG---------GLDGAFLVRKLEEMAVQARSSL------LYDRATTESTQTDDVPPAVDVSSDGACIAASTAVDSSKSFGGVA--PPSEAGDNMPVDQERATLQKAAPKRNKSKEKSKKGRRLGSGLIQSNSVINGKKKDNEGKAASENREGGSEGNEDSCHAPVDAASKNGSTVAPGAKTTEALREAETIEKLRWADEVSAAXXXXXXXXXXXXKEAEARERAVXXXXXXXXXXXXXXXXXXXXXXXXAVDGQASSPPRQQGDGDGHQDEMVPSVGDESREEGEIVVLPKAPDISEPVGRASEGEVS----------VSLSQNDAKEKNNDGDRTVGARP----IGAPSAKH---VVASEAGMAPVVNSLLPSGWAVVWDDLHGANYYHNLATNETTWVLPSTRATEAPRAS 2204
            LMGL++YGSDS+EE                                     A+ S VS+      E     LP+GWQQCMD++G +YFWN ++G+T+W+ P G     +  ++  SSA+ +  +A    P+ VA  A+      SDATSDTASE +E       G   D G  R++        A A  VS    + ++                     +P S+A   A  DR     R   VG+  +G  E     +S    + DV  AA   + +DDLLAGIEAE+L G GDG G    GD D+      EE    +     +DF+PLR ++ GLD RAQ+++AEL A  A AAEG+G + G       D   RL +EL AVLRARLSDWR+G         GLDG F V KLEEMA +ARS+L         RAT +S       P +  S D     A  AV S+ S   VA  PP +A +             A     KSK  SKK  R+     ++ S  NG     E  +     +G +EG   S HA  D AS   ST +       A+R A   EKL+WADEVSA XXXXXXXXXXXX          XXXXXXX                   D Q S+  R++     H      +  D+         L  A  I E  G    G V                            T GA+     + AP  +    V+A +  +  V     PSGW+ V+D  H A YYHNL T+ET+WVLP+T A   P  S
Sbjct:   61 LMGLLHYGSDSEEE------------------------------EPPAQKPASASSVSTPDPSPAESLTYTLPTGWQQCMDNAGLVYFWNTETGDTSWDPPEGT----QTKVSKTSSAVDTPSEALPIVPEAVADAASREAPAGSDATSDTASEAEEDKAVALAGVTVDEGANRASTNSSGVAGAAAPAVSKVGVDTEEVEEGAVSGGQEAADRGATPKGSPRSAADPPAAQDR-----RMTAVGEEQKGGEELPQQSKSTGTGSSDVPVAA--TAGIDDLLAGIEAELLLGGGDGEGKLD-GDKDEAKDSAVEENGDTRSTGEEQDFAPLREVAPGLDARAQKAHAELAALLAVAAEGKGEEAGSSVVQATDPSVRLGIELAAVLRARLSDWRQGKCMDRIGVGGLDGTFFVLKLEEMAAEARSALGPSSCPTAHRATGQSQS--QTRPELAASMDAITPGAMGAVSSAGSLPDVADPPPGDAAERDAT---------AVSDGKKSKGHSKKRPRVRGAATKAASADNG-----EAVSTRSVDDGVAEGVPAS-HATDDNASS--STASGXXXXXXAVRAARNAEKLKWADEVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTVEKE----------VTDSQGSNSDRRRK----HAASGDDATSDKRNHATSTDTLATARAIVE--GTIDLGGVGDXXXXXXXXXXXXXXXXXXXXXXXXXATAGAKDDAASVPAPDTRESGIVIAKDPTLPDV-----PSGWSAVFDTTHQAYYYHNLTTDETSWVLPATVAESHPADS 785

[Close]

BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot
Match: A0A7S3USF4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF4_HETAK)

HSP 1 Score: 80.5 bits (197), Expect = 3.790e-14
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3

Query: 3525 GDVWNGESLSGLLLGYGPRRYRNLGGGYYMITLGSGPEWAAAAVAALGQGVADPVAEARVDWICCTASAPGYGLFLRWAGDDDEQKLFDVPDELFDDPP 3821
            GD+W G  ++GL  G GPR +R LG GYY++T  + PE A AAV    +     + +AR DW  C        +F+RW G+ D  ++FD+P E FDDPP
Sbjct:    1 GDLWRGHQVAGLFPGCGPRAFRALGQGYYLVTFAA-PERAGAAVVLAAEEGPRALVQARSDWAKCKRD-----VFIRWVGEQDPDEVFDLPKEDFDDPP 93

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G8X5_ECTSI	4.320e-84	35.05	Similar to Fe65 n=1 Tax=Ectocarpus siliculosus Tax...	[more]
A0A6H5JJN1_9PHAE	7.420e-41	33.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S3USF4_HETAK	3.790e-14	42.42	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig1006	contig	A-nodosum_M_contig1006:46416..52148 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	4739
Hectar predicted targeting category	other localisation
Exons	4
Cds size	4287

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig1006.5.4	prot_A-nodosum_M_contig1006.5.4	Ascophyllum nodosum dioecious	polypeptide	A-nodosum_M_contig1006 46421..51701 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680866363.8654215-UTR-A-nodosum_M_contig1006:46415..46420	1680866363.8654215-UTR-A-nodosum_M_contig1006:46415..46420	Ascophyllum nodosum dioecious	UTR	A-nodosum_M_contig1006 46416..46420 +
1680866363.923014-UTR-A-nodosum_M_contig1006:51701..52148	1680866363.923014-UTR-A-nodosum_M_contig1006:51701..52148	Ascophyllum nodosum dioecious	UTR	A-nodosum_M_contig1006 51702..52148 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680866363.878697-CDS-A-nodosum_M_contig1006:46420..47486	1680866363.878697-CDS-A-nodosum_M_contig1006:46420..47486	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1006 46421..47486 +
1680866363.892098-CDS-A-nodosum_M_contig1006:47778..48793	1680866363.892098-CDS-A-nodosum_M_contig1006:47778..48793	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1006 47779..48793 +
1680866363.9015992-CDS-A-nodosum_M_contig1006:49144..49648	1680866363.9015992-CDS-A-nodosum_M_contig1006:49144..49648	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1006 49145..49648 +
1680866363.912781-CDS-A-nodosum_M_contig1006:49999..51701	1680866363.912781-CDS-A-nodosum_M_contig1006:49999..51701	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig1006 50000..51701 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at A-nodosum_M_contig1006:46416..52148+
coding sequence from alignment at A-nodosum_M_contig1006:46416..52148+

protein sequence of mRNA_A-nodosum_M_contig1006.5.4

>prot_A-nodosum_M_contig1006.5.4 ID=prot_A-nodosum_M_contig1006.5.4|Name=mRNA_A-nodosum_M_contig1006.5.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1429bp
MGLVYYGSDSDEEGSSDRDGSSPTGSAAKTNEDRGVGLAFKTNEDRDAAE
AAGSPVSSAAADATEDAVLNLPSGWQQCMDSSGAIYFWNVDSGETTWEMP
AGAIYRRKESLAPDSSALSSSGDAAGTPKQVATGAAERDRVASDATSDTA
SEPDEGEDEDGGVKRSADIAPATLVSSATAENDKGDPDGGVSRSVENTPL
SSAAELDRTGGKSRSRKVGDGDQGANEERSVADDVAQAAAGLSCVDDLLA
GIEAEMLSGTGDGGGNRGAGDADKGDKDPTEEIDSAKEDFSPLRAISSGL
DVRAQQSYAELVASFAAAEGEGGDVGRQADGMDVKRRLALELGAVLRARL
SDWREGGLDGAFLVRKLEEMAVQARSSLLYDRATTESTQTDDVPPAVDVS
SDGACIAASTAVDSSKSFGGVAPPSEAGDNMPVDQERATLQKAAPKRNKS
KEKSKKGRRLGSGLIQSNSVINGKKKDNEGKAASENREGGSEGNEDSCHA
PVDAASKNGSTVAPGAKTTEALREAETIEKLRWADEVSAAAAAAVAAAAR
EKKEAEARERAVSAAAAAAVAAAAREKKEAEARERAAVDGQASSPPRQQG
DGDGHQDEMVPSVGDESREEGEIVVLPKAPDISEPVGRASEGEVSVSLSQ
NDAKEKNNDGDRTVGARPIGAPSAKHVVASEAGMAPVVNSLLPSGWAVVW
DDLHGANYYHNLATNETTWVLPSTRATEAPRASPAEEDPPAPSPPSPNGV
KIPTGSVSRETSPEGGKGERREEKKTSKSSKRRQKKSGGQTGDEQAGDSS
PTRGRGDMKKTTTLEQEISTEGNGSSAASTKASPTDKISIGEKEKAASAE
PGARRAAEELPRLVVWRSQPRTWARPGVRYAGGAIDLRKFLRKNRRRLPP
GTEGRRALLSISHFGWNSHGASMPSASLRDPRPRASRSLTASRPDGVPGS
GKLTVELEMFMHFSREGECHEERTRPLFRRSDRLRACQPEDAFVVRVEGK
VSEQTRRCATRLSRFRRQLVKMSLTLPAPSPSVPRPLSAFVRLPCPGTRA
FPLTWQCYLPPRVSSSKRLGRGGIRSPWAAVWDKIQNAYYYHNTETNETT
WVRPSASAVEEKRVVEDGVTPKISQEKNPTQDENIENVSHTALDSDPASQ
APSASASGAVDMRPSTLVWWSDAGDVWNGESLSGLLLGYGPRRYRNLGGG
YYMITLGSGPEWAAAAVAALGQGVADPVAEARVDWICCTASAPGYGLFLR
WAGDDDEQKLFDVPDELFDDPPPDPAVAVAVAVDGDTASHTIASAEAEAA
REEAEAAREEEEANAAAAAAVAATEAAEAAGSEAAAKAVAKVPASASLPK
KRKTNKGSGTGTSSVGSISKKRKGAASLIDKWKAVASTAGEEAEREAERQ
EKMERWKARAAALDPDNPNFMPLGRKRR*

mRNA from alignment at A-nodosum_M_contig1006:46416..52148+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_A-nodosum_M_contig1006.5.4 ID=mRNA_A-nodosum_M_contig1006.5.4|Name=mRNA_A-nodosum_M_contig1006.5.4|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5733bp|location=Sequence derived from alignment at A-nodosum_M_contig1006:46416..52148+ (Ascophyllum nodosum dioecious)
CGTTGATGGGTCTCGTCTACTATGGCTCGGACTCTGACGAGGAGGGATCT
TCGGATCGCGATGGATCTTCTCCGACGGGCTCAGCAGCCAAGACGAACGA
AGACAGGGGGGTTGGCTTAGCATTCAAGACAAACGAAGACAGGGATGCTG
CTGAAGCCGCAGGATCCCCAGTCTCAAGCGCTGCCGCCGATGCTACCGAG
GACGCGGTGTTGAACTTGCCAAGCGGCTGGCAGCAGTGCATGGACAGTTC
GGGAGCGATTTACTTTTGGAATGTGGATTCGGGCGAGACCACATGGGAGA
TGCCAGCGGGTGCAATCTACCGAAGAAAAGAGTCCCTGGCTCCCGACTCC
AGCGCTCTCTCCTCAAGCGGGGATGCCGCCGGTACCCCCAAACAGGTTGC
TACTGGAGCAGCCGAAAGAGACCGAGTAGCCAGCGATGCTACGAGCGATA
CCGCGAGTGAGCCCGATGAGGGTGAAGATGAGGATGGCGGGGTGAAAAGA
TCTGCAGATATTGCTCCAGCGACTTTGGTCTCGAGCGCCACTGCCGAGAA
TGACAAGGGCGACCCTGACGGGGGAGTTTCTCGCAGCGTCGAGAATACAC
CTTTGTCGTCGGCGGCGGAACTCGATCGTACCGGTGGGAAGAGCCGAAGC
CGGAAGGTCGGCGATGGCGATCAAGGAGCAAACGAAGAAAGATCGGTTGC
TGACGATGTTGCCCAGGCAGCAGCGGGCTTGAGCTGCGTTGACGACCTAC
TTGCCGGCATTGAAGCAGAGATGTTATCCGGCACTGGAGACGGGGGCGGT
AACCGAGGCGCGGGCGACGCCGATAAAGGAGATAAGGATCCCACAGAAGA
AATCGATTCCGCCAAAGAAGATTTCTCTCCCCTTCGAGCGATTTCATCAG
GGCTGGACGTGAGAGCGCAGCAATCATACGCTGAACTCGTCGCGTCGTTC
GCGGCGGCCGAAGGGGAAGGCGGGGATGTCGGGCGACAGGCTGATGGGAT
GGATGTCAAGCGTAGGCTTGCTTTGGAGCTAGGCGCGGTGCTCCGCGCTC
GCCTTTCCGACTGGAGAGAGGGTGAGTGTGTCCTCAAAGATTGAAGTCAT
TACCGTCTATCGAGTATTGACCCATCAACCAAACGCTGTAGTGGGCAGAG
GGTGGCGTGGCTCTCTCCTTTGAAGATGACTAAGTGGCAAGCGTAGTTAC
ATCCCCCAGCTTCCCCCAATGTGTCCGTCGTTTCTCGAACCCCTCATCTC
GTCAGTAATTAAGGGTTTGCGCGTCGGGTCTGCGCGGGTGTTGGTTGTGA
CCCGAAAAACGCGCTATTTTTCGCCCGTTGCTCGATATATTTACTCCTTG
CTCATTCACCCAGGCGGACTTGACGGGGCCTTCCTAGTACGCAAGCTAGA
AGAGATGGCGGTGCAAGCTCGATCGTCGCTGCTCTATGACCGTGCTACCA
CCGAGTCGACGCAGACAGACGATGTACCTCCTGCGGTGGACGTTTCGTCT
GACGGTGCATGCATCGCCGCTAGCACCGCCGTCGATTCTTCGAAGTCTTT
TGGTGGCGTTGCTCCCCCCTCTGAGGCTGGCGATAACATGCCAGTAGACC
AGGAGCGAGCAACGCTTCAAAAAGCTGCGCCAAAGAGGAATAAATCGAAG
GAGAAATCTAAAAAGGGGCGTCGGCTTGGAAGCGGGCTCATCCAATCAAA
CTCGGTGATAAATGGGAAAAAGAAGGACAACGAGGGCAAAGCGGCATCTG
AGAACAGAGAAGGTGGTAGTGAAGGAAACGAAGACTCGTGCCATGCTCCC
GTCGACGCCGCCTCCAAGAACGGGTCTACGGTTGCACCAGGCGCTAAGAC
CACCGAAGCACTGCGCGAGGCCGAGACCATCGAAAAATTGAGGTGGGCGG
ACGAAGTTTCCGCGGCTGCCGCTGCGGCTGTCGCAGCTGCCGCGAGAGAG
AAGAAAGAGGCCGAAGCGAGGGAAAGAGCCGTTTCCGCGGCTGCCGCTGC
GGCTGTCGCAGCTGCCGCGAGAGAGAAGAAAGAGGCCGAAGCTAGGGAAA
GAGCCGCGGTGGACGGGCAGGCGTCATCTCCACCACGGCAGCAAGGCGAC
GGCGACGGTCATCAGGACGAAATGGTGCCGTCGGTGGGAGACGAATCACG
GGAAGAGGGCGAGATTGTGGTGCTTCCCAAGGCCCCGGACATTTCCGAGC
CCGTGGGTAGGGCGAGCGAGGGCGAAGTTTCCGTAAGTTTGAGTCAGAAT
GACGCGAAAGAAAAAAACAACGATGGCGACAGAACTGTCGGAGCACGTCC
AATAGGGGCTCCTTCGGCAAAGCACGTAGTGGCGAGCGAAGCGGGGATGG
CTCCCGTGGTAAATTCTTTGCTTCCCAGGTGCGTCTGTTCCCACTACTTT
TGAGGAAAAGCACGAGGCGACCCTAGTCTCGCGATCTCGCTGTATGTGTG
CCAAATACCGTTACGGGCTTTTTGTTGGCCGTGTACCGTCTTGGCAGATT
TGGTAACCCCAAACCTGCTCGTTTTACCAGAGTTCTGACTGGGTATGTCT
CAGGGAGCGGTTCAGGAAGCTCATGTAATGTGTACGCGCTACTCCGTCGA
AGACTCGTGTGTGACTGTAAGTATTGCCTGGTACGAAACTACTTGAAATG
AACATAATCATGGCACACACTCTGTCTTTCACATTTATTATTTCTAATTT
TTCTATCGTTTGCTCGCATCTTTTTGCAGCGGCTGGGCGGTCGTCTGGGA
CGACCTTCACGGTGCCAACTACTACCACAACCTCGCTACGAATGAAACAA
CGTGGGTGCTGCCGAGCACACGGGCGACGGAGGCTCCTCGGGCTTCTCCC
GCCGAAGAGGACCCGCCCGCGCCGTCTCCGCCCTCGCCAAACGGTGTCAA
AATACCAACAGGCTCTGTGAGTCGCGAAACCTCCCCGGAGGGCGGCAAAG
GCGAACGAAGGGAGGAAAAAAAAACTAGCAAATCCTCGAAGCGGCGGCAA
AAAAAGTCGGGTGGTCAAACAGGCGACGAGCAAGCAGGAGACTCGTCACC
CACGCGTGGTAGAGGAGACATGAAGAAGACGACAACGCTTGAGCAGGAAA
TATCTACTGAAGGGAACGGCTCGTCCGCGGCATCGACGAAGGCATCGCCA
ACGGATAAGATTTCGATCGGAGAAAAAGAGAAGGCGGCGTCCGCTGAGCC
TGGAGCACGCCGCGCGGCGGAGGAACTCCCAAGGTACGGACCTGTGACTT
CGTTTCCTTCAGCGCCAGCAGGCAGTGGTGCGTGGAGCGAGCTATCGCTC
GTCCGTCCGCATCGTGCGTCTACTACGCGGGCGCAAATTTTATGCGGCGG
TCGATTATGGGCTATTCCCACTTTCGTCCCCGTGTCCTCTCTTTAATGGT
CCCACGGAGATACCGCTGGCAGTTCATGGCAGAGTCCGGAATACTTTGTG
TTGTTTTTCTGTGGCGTGCCTCGTGCTTCTCTTTGGTATGCAGTGCATGG
CGTCCGCCGTGCACGTCCCCCCGTTTTCCCACTTCCCTCCATATCTCTAT
ACCATCCCTTACTCGACGGCACCTCTCGGATTAGACTGGTTGTCTGGCGG
AGTCAGCCAAGGACGTGGGCCCGACCGGGAGTTCGCTATGCAGGAGGCGC
AATCGATCTCCGTAAGTTTCTACGAAAAAACAGAAGGCGACTGCCCCCCG
GGACAGAGGGAAGGCGAGCATTGCTTTCAATCTCCCATTTTGGGTGGAAC
AGTCACGGGGCGTCGATGCCTAGTGCATCGCTCCGCGACCCTCGCCCGCG
AGCTTCGCGATCCCTAACGGCATCGCGCCCCGATGGTGTTCCCGGCAGTG
GAAAGCTGACCGTTGAACTGGAAATGTTCATGCATTTTTCGCGTGAAGGG
GAGTGTCACGAGGAGAGAACCAGGCCGCTCTTCCGACGGTCCGACCGTCT
CAGAGCCTGTCAACCCGAGGACGCCTTCGTGGTTCGGGTGGAGGGAAAGG
TGAGTGAGCAGACCCGAAGATGCGCGACTCGATTATCACGGTTTCGTCGC
CAGTTGGTCAAAATGTCGCTGACTTTGCCTGCCCCGTCTCCTTCCGTCCC
CCGTCCCCTATCCGCCTTCGTCCGCCTCCCGTGCCCTGGCACCCGCGCTT
TTCCCTTGACGTGGCAATGTTATCTCCCTCCGCGGGTGTCCTCTTCAAAA
CGGTTGGGGCGTGGTGGGATCCGTAGTCCGTGGGCTGCTGTCTGGGACAA
GATTCAGAACGCCTACTACTATCACAACACGGAAACAAACGAGACAACAT
GGGTGCGCCCATCTGCGTCCGCTGTCGAAGAGAAAAGGGTGGTGGAAGAC
GGCGTGACACCGAAAATTTCCCAGGAAAAGAATCCAACCCAGGACGAAAA
TATTGAGAATGTGTCGCATACAGCCCTTGACAGCGACCCCGCGTCGCAAG
CGCCCTCTGCATCCGCTTCGGGGGCCGTAGACATGCGACCCTCGACTCTG
GTGTGGTGGTCGGACGCTGGTGATGTTTGGAATGGGGAGTCGCTGTCGGG
GCTACTCTTGGGTTATGGCCCCAGGAGATATCGTAACCTCGGTGGAGGCT
ACTACATGATTACGCTTGGTTCAGGCCCCGAGTGGGCGGCAGCGGCTGTT
GCGGCGCTGGGCCAGGGCGTCGCCGACCCCGTTGCGGAGGCGCGGGTTGA
CTGGATTTGCTGCACTGCGTCGGCCCCGGGCTACGGCTTGTTTTTAAGGT
GGGCCGGAGATGACGACGAGCAAAAACTGTTCGATGTGCCTGACGAGCTT
TTCGATGACCCTCCACCGGACCCTGCGGTCGCCGTTGCAGTCGCGGTCGA
CGGGGATACCGCCTCACACACCATTGCGTCGGCTGAGGCGGAGGCCGCAA
GGGAAGAAGCGGAGGCCGCGAGGGAAGAAGAAGAGGCAAACGCGGCGGCG
GCGGCAGCGGTGGCGGCAACAGAAGCAGCGGAGGCGGCGGGCAGCGAGGC
GGCAGCGAAGGCTGTGGCGAAAGTGCCCGCTTCTGCCTCGTTGCCGAAAA
AGCGCAAGACTAACAAGGGCTCGGGGACGGGCACGTCCAGCGTGGGCTCC
ATCTCGAAGAAGCGGAAGGGCGCGGCGAGCCTGATCGACAAGTGGAAGGC
AGTGGCGTCAACCGCGGGGGAAGAAGCTGAGCGGGAGGCAGAGAGGCAGG
AGAAAATGGAGCGGTGGAAGGCCCGGGCTGCCGCGCTCGATCCCGACAAT
CCGAACTTCATGCCTCTTGGCCGCAAGAGGAGATGACAAGGCGCCTAGCG
TACAAGGTGGCTAATACGAATATAACTAATTATCATCTTGCGATGCGGTG
TTTGACGAGGAGGCCCGTTATTTTCCTTGGGAGGGGCGTCATTCAACTCC
GGCATGATTTGTTTGCGGCTACCGTGTGGGATTGAGGAGGGAGCTGAACG
TTTTCAAGTACGAGCACATATATATATATAGTATACTGGTATATATTTAT
TTATGTATCCATACATATAATATATTTGAAGGACTTGAGAAAGATCGAAT
AGAGCATTTTGGATTAAAAAAAATGCGGGTTTGCCCTCCCTGAAGTAGCT
GCAATACAATCACGCTTCGAATGAACCACGCTGCATGGTGAAAATTAATG
CTCGCTTGGGCATCATTGGGGGGATTCGAAATAAATTTTATTTCTCGATA
GAATTGCCATCGGTACAATCGAAGAGGAAGGAC

Coding sequence (CDS) from alignment at A-nodosum_M_contig1006:46416..52148+

>mRNA_A-nodosum_M_contig1006.5.4 ID=mRNA_A-nodosum_M_contig1006.5.4|Name=mRNA_A-nodosum_M_contig1006.5.4|organism=Ascophyllum nodosum dioecious|type=CDS|length=4287bp|location=Sequence derived from alignment at A-nodosum_M_contig1006:46416..52148+ (Ascophyllum nodosum dioecious)
ATGGGTCTCGTCTACTATGGCTCGGACTCTGACGAGGAGGGATCTTCGGA
TCGCGATGGATCTTCTCCGACGGGCTCAGCAGCCAAGACGAACGAAGACA
GGGGGGTTGGCTTAGCATTCAAGACAAACGAAGACAGGGATGCTGCTGAA
GCCGCAGGATCCCCAGTCTCAAGCGCTGCCGCCGATGCTACCGAGGACGC
GGTGTTGAACTTGCCAAGCGGCTGGCAGCAGTGCATGGACAGTTCGGGAG
CGATTTACTTTTGGAATGTGGATTCGGGCGAGACCACATGGGAGATGCCA
GCGGGTGCAATCTACCGAAGAAAAGAGTCCCTGGCTCCCGACTCCAGCGC
TCTCTCCTCAAGCGGGGATGCCGCCGGTACCCCCAAACAGGTTGCTACTG
GAGCAGCCGAAAGAGACCGAGTAGCCAGCGATGCTACGAGCGATACCGCG
AGTGAGCCCGATGAGGGTGAAGATGAGGATGGCGGGGTGAAAAGATCTGC
AGATATTGCTCCAGCGACTTTGGTCTCGAGCGCCACTGCCGAGAATGACA
AGGGCGACCCTGACGGGGGAGTTTCTCGCAGCGTCGAGAATACACCTTTG
TCGTCGGCGGCGGAACTCGATCGTACCGGTGGGAAGAGCCGAAGCCGGAA
GGTCGGCGATGGCGATCAAGGAGCAAACGAAGAAAGATCGGTTGCTGACG
ATGTTGCCCAGGCAGCAGCGGGCTTGAGCTGCGTTGACGACCTACTTGCC
GGCATTGAAGCAGAGATGTTATCCGGCACTGGAGACGGGGGCGGTAACCG
AGGCGCGGGCGACGCCGATAAAGGAGATAAGGATCCCACAGAAGAAATCG
ATTCCGCCAAAGAAGATTTCTCTCCCCTTCGAGCGATTTCATCAGGGCTG
GACGTGAGAGCGCAGCAATCATACGCTGAACTCGTCGCGTCGTTCGCGGC
GGCCGAAGGGGAAGGCGGGGATGTCGGGCGACAGGCTGATGGGATGGATG
TCAAGCGTAGGCTTGCTTTGGAGCTAGGCGCGGTGCTCCGCGCTCGCCTT
TCCGACTGGAGAGAGGGCGGACTTGACGGGGCCTTCCTAGTACGCAAGCT
AGAAGAGATGGCGGTGCAAGCTCGATCGTCGCTGCTCTATGACCGTGCTA
CCACCGAGTCGACGCAGACAGACGATGTACCTCCTGCGGTGGACGTTTCG
TCTGACGGTGCATGCATCGCCGCTAGCACCGCCGTCGATTCTTCGAAGTC
TTTTGGTGGCGTTGCTCCCCCCTCTGAGGCTGGCGATAACATGCCAGTAG
ACCAGGAGCGAGCAACGCTTCAAAAAGCTGCGCCAAAGAGGAATAAATCG
AAGGAGAAATCTAAAAAGGGGCGTCGGCTTGGAAGCGGGCTCATCCAATC
AAACTCGGTGATAAATGGGAAAAAGAAGGACAACGAGGGCAAAGCGGCAT
CTGAGAACAGAGAAGGTGGTAGTGAAGGAAACGAAGACTCGTGCCATGCT
CCCGTCGACGCCGCCTCCAAGAACGGGTCTACGGTTGCACCAGGCGCTAA
GACCACCGAAGCACTGCGCGAGGCCGAGACCATCGAAAAATTGAGGTGGG
CGGACGAAGTTTCCGCGGCTGCCGCTGCGGCTGTCGCAGCTGCCGCGAGA
GAGAAGAAAGAGGCCGAAGCGAGGGAAAGAGCCGTTTCCGCGGCTGCCGC
TGCGGCTGTCGCAGCTGCCGCGAGAGAGAAGAAAGAGGCCGAAGCTAGGG
AAAGAGCCGCGGTGGACGGGCAGGCGTCATCTCCACCACGGCAGCAAGGC
GACGGCGACGGTCATCAGGACGAAATGGTGCCGTCGGTGGGAGACGAATC
ACGGGAAGAGGGCGAGATTGTGGTGCTTCCCAAGGCCCCGGACATTTCCG
AGCCCGTGGGTAGGGCGAGCGAGGGCGAAGTTTCCGTAAGTTTGAGTCAG
AATGACGCGAAAGAAAAAAACAACGATGGCGACAGAACTGTCGGAGCACG
TCCAATAGGGGCTCCTTCGGCAAAGCACGTAGTGGCGAGCGAAGCGGGGA
TGGCTCCCGTGGTAAATTCTTTGCTTCCCAGCGGCTGGGCGGTCGTCTGG
GACGACCTTCACGGTGCCAACTACTACCACAACCTCGCTACGAATGAAAC
AACGTGGGTGCTGCCGAGCACACGGGCGACGGAGGCTCCTCGGGCTTCTC
CCGCCGAAGAGGACCCGCCCGCGCCGTCTCCGCCCTCGCCAAACGGTGTC
AAAATACCAACAGGCTCTGTGAGTCGCGAAACCTCCCCGGAGGGCGGCAA
AGGCGAACGAAGGGAGGAAAAAAAAACTAGCAAATCCTCGAAGCGGCGGC
AAAAAAAGTCGGGTGGTCAAACAGGCGACGAGCAAGCAGGAGACTCGTCA
CCCACGCGTGGTAGAGGAGACATGAAGAAGACGACAACGCTTGAGCAGGA
AATATCTACTGAAGGGAACGGCTCGTCCGCGGCATCGACGAAGGCATCGC
CAACGGATAAGATTTCGATCGGAGAAAAAGAGAAGGCGGCGTCCGCTGAG
CCTGGAGCACGCCGCGCGGCGGAGGAACTCCCAAGACTGGTTGTCTGGCG
GAGTCAGCCAAGGACGTGGGCCCGACCGGGAGTTCGCTATGCAGGAGGCG
CAATCGATCTCCGTAAGTTTCTACGAAAAAACAGAAGGCGACTGCCCCCC
GGGACAGAGGGAAGGCGAGCATTGCTTTCAATCTCCCATTTTGGGTGGAA
CAGTCACGGGGCGTCGATGCCTAGTGCATCGCTCCGCGACCCTCGCCCGC
GAGCTTCGCGATCCCTAACGGCATCGCGCCCCGATGGTGTTCCCGGCAGT
GGAAAGCTGACCGTTGAACTGGAAATGTTCATGCATTTTTCGCGTGAAGG
GGAGTGTCACGAGGAGAGAACCAGGCCGCTCTTCCGACGGTCCGACCGTC
TCAGAGCCTGTCAACCCGAGGACGCCTTCGTGGTTCGGGTGGAGGGAAAG
GTGAGTGAGCAGACCCGAAGATGCGCGACTCGATTATCACGGTTTCGTCG
CCAGTTGGTCAAAATGTCGCTGACTTTGCCTGCCCCGTCTCCTTCCGTCC
CCCGTCCCCTATCCGCCTTCGTCCGCCTCCCGTGCCCTGGCACCCGCGCT
TTTCCCTTGACGTGGCAATGTTATCTCCCTCCGCGGGTGTCCTCTTCAAA
ACGGTTGGGGCGTGGTGGGATCCGTAGTCCGTGGGCTGCTGTCTGGGACA
AGATTCAGAACGCCTACTACTATCACAACACGGAAACAAACGAGACAACA
TGGGTGCGCCCATCTGCGTCCGCTGTCGAAGAGAAAAGGGTGGTGGAAGA
CGGCGTGACACCGAAAATTTCCCAGGAAAAGAATCCAACCCAGGACGAAA
ATATTGAGAATGTGTCGCATACAGCCCTTGACAGCGACCCCGCGTCGCAA
GCGCCCTCTGCATCCGCTTCGGGGGCCGTAGACATGCGACCCTCGACTCT
GGTGTGGTGGTCGGACGCTGGTGATGTTTGGAATGGGGAGTCGCTGTCGG
GGCTACTCTTGGGTTATGGCCCCAGGAGATATCGTAACCTCGGTGGAGGC
TACTACATGATTACGCTTGGTTCAGGCCCCGAGTGGGCGGCAGCGGCTGT
TGCGGCGCTGGGCCAGGGCGTCGCCGACCCCGTTGCGGAGGCGCGGGTTG
ACTGGATTTGCTGCACTGCGTCGGCCCCGGGCTACGGCTTGTTTTTAAGG
TGGGCCGGAGATGACGACGAGCAAAAACTGTTCGATGTGCCTGACGAGCT
TTTCGATGACCCTCCACCGGACCCTGCGGTCGCCGTTGCAGTCGCGGTCG
ACGGGGATACCGCCTCACACACCATTGCGTCGGCTGAGGCGGAGGCCGCA
AGGGAAGAAGCGGAGGCCGCGAGGGAAGAAGAAGAGGCAAACGCGGCGGC
GGCGGCAGCGGTGGCGGCAACAGAAGCAGCGGAGGCGGCGGGCAGCGAGG
CGGCAGCGAAGGCTGTGGCGAAAGTGCCCGCTTCTGCCTCGTTGCCGAAA
AAGCGCAAGACTAACAAGGGCTCGGGGACGGGCACGTCCAGCGTGGGCTC
CATCTCGAAGAAGCGGAAGGGCGCGGCGAGCCTGATCGACAAGTGGAAGG
CAGTGGCGTCAACCGCGGGGGAAGAAGCTGAGCGGGAGGCAGAGAGGCAG
GAGAAAATGGAGCGGTGGAAGGCCCGGGCTGCCGCGCTCGATCCCGACAA
TCCGAACTTCATGCCTCTTGGCCGCAAGAGGAGATGA